Array 1 1849963-1850235 **** Predicted by CRISPRDetect 2.4 *** >NC_018019.3 Corynebacterium pseudotuberculosis Cp162, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1849963 29 100.0 32 ............................. GAAATTGCTGCCCTTTCTAAGGCTCTTTCGGG 1850024 29 100.0 32 ............................. GGCAAGGTGGTGAGATAAAAAGCTTGCAGCAT 1850085 29 100.0 32 ............................. CGAAGTGCTCGATGGCTAGGGTGCGTAGCTGG 1850146 29 100.0 32 ............................. AGGTTGGTCGATTGGGTAAATTAATTCTTGTC 1850207 29 96.6 0 ............................G | ========== ====== ====== ====== ============================= ================================ ================== 5 29 99.3 32 CTTTTCTCCGCGCACGCGGAGGTAGTTCC # Left flank : CGCCTCGACCCCTGCGAAAACCGCTAACCCGAGAAACCCTCGAAACTGAGACTGCTCAACATCAAGAATTTGCACACCATTAGCGGCCAAAACACGAAAAGCTGCTGCCGACGCCCCTTGCCGATCCTGGCCGGAGATCGTAATAACAGCCGGGGTTAACTCTGGGCGAAGACTAACAGTTACTTGAGGCTGGTCCAGTTCAATCACCGATCTATTGTTGCACGAAAGCCCTTCAATTCCTCCCGGCGCTCCCCCTGTTTAGCGATGCTGTTTACTTTCCTAACAACGAATACATATCTTGAGCATCTATTAAGTTTCGTACCCTCAAGTCTGGTGCTTGCTCTGCTCATTGTGGGGGTGAGTAATAGGACCTCTCAGGACAATCATGGTCTAATAAAAGTGCACTTTCGCACCGACGACGAGGAGTTAATGCGATGATTCCAAACGCAGTTTGGGCTGTTTTAGCCCTTTCCGAGGAGTAAAAGTGCAGGTGAGTTAGT # Right flank : GGATCATCAAAAAGGCAAGAAGCTAGAGCATTGGCATTGGAAGTAATAGCTCAGCAAATCCGCGATCAAAAAATCCTTTCCTCGGCTGTCGAAGAAATTTTTCTTTCTCTCTCGGATCGGCAAACTGCTGAAGAACGAGCGGGGGCTGCTATGCAAAAGATCCTTGATTTGGGAAAGCCTCATTCCTTCCTCACATCTTCTTTTTCCTTAAGCACTAAAGAAGTTTCTGCTATGTTGAAAGCTTCCAAGAACTCTGACGAAAACAGATTTGAACAAGCAGAAACGAGCACTGATGACCATGATGAATCCCACTGAGCGCATTAACAAAGACCAATTACGGCAGATTCGCAATGATCTAGCAAGCGCAGAAATCGAGGGTCAATCAAGAGCTCCAGAAGACGAAAAAATCCTTGCCGCTTATTATCTTGGTGAAGTTAGCGAACAAGAATCTTTTGAATCGCTTCTGAAAGCTGCAGGAGTTCACCCCCCTTACCCATCAA # Questionable array : NO Score: 6.02 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTCTCCGCGCACGCGGAGGTAGTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.90,-10.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA //