Array 1 2351-8 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJUX01000011.1 Alkalibacterium putridalgicola strain NBRC 103243 sequence11, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================ ================== 2350 36 100.0 29 .................................... TGTATCCGATAATGGTAGTACGCTTAATT 2285 36 100.0 30 .................................... TTGACACTGAACTAGACCAGGAGCTCAGGT 2219 36 100.0 30 .................................... TTGAAAAAGTGAATAGTCTGCTGATAGATT 2153 36 100.0 30 .................................... TACAGAACCATATCCATTTAAAATGTCTAG 2087 36 100.0 31 .................................... CGCAGCCTTTCCTATCATCTAGTCTGTTCTT 2020 36 100.0 30 .................................... TCGTATCGAGCGTAAGAAACGGCATACAGC 1954 36 100.0 30 .................................... ACACGACGTTAAGATACTCATTCCCGGTGC 1888 36 100.0 29 .................................... GATCCTAAATCCGAATGGACTTGTTACAC 1823 36 100.0 30 .................................... AGAGCGTCATGCTCCTCCGCTTAAAGATGG 1757 36 100.0 30 .................................... GGAGACGTTGCGAAAATGTCCTCCAGCGAC 1691 36 100.0 30 .................................... CAACATAGCGTAAGTCTAACTGTTCGATCA 1625 36 100.0 30 .................................... GCCATTTATCGAACACTCCTTTGATTAGTC 1559 36 100.0 30 .................................... AAAACATCCCAGTCAGTTTAGATGACCTGT 1493 36 100.0 30 .................................... TTCTCACAGACAAGAGCAACCCACTAGTAG 1427 36 100.0 31 .................................... GCCGTAATATCAGAACGCTCTAGTGTGCGCT 1360 36 100.0 30 .................................... TCGACAAACACCAGCAATCACATCGTACTG 1294 36 100.0 29 .................................... TGCATTGTAGTGATGTAATATTTATTAAG 1229 36 100.0 29 .................................... GATAATTTCCCGGCATTTCTTCGACCATT 1164 36 100.0 30 .................................... CGCCTTTTGTTTTGCCATAACGTTTCCCCC 1098 36 100.0 30 .................................... GAAATCGTTGATCCTGCAACGGGCACATGG 1032 36 100.0 30 .................................... ACGAAACATTCAGCGGTGCATCATCCGGCG 966 36 100.0 30 .................................... TCGTGAATGATATAAACAGACGGTTTAATA 900 36 100.0 29 .................................... TTCCCGTCTTTGTATATGACTTGCAGGCT 835 36 100.0 30 .................................... TAGCCAAAGCCCGCGGTTATAAACCCGGTT 769 36 100.0 30 .................................... TTGATTTTACGGTTCATCAATTACGACATA 703 36 100.0 31 .................................... CTTCCTGACCTAATCGCATAAGCGTAAGACT 636 36 100.0 29 .................................... GTATCAAACGCGCGTCAACCGTAGCGTAA 571 36 100.0 29 .................................... CATCATAGACAGTCACATCATAGACATGA 506 36 100.0 29 .................................... TTCTAATAACCATGGTTGGGTAGTATATA 441 36 100.0 30 .................................... CTATGTTGAAAGGAGAGAAACTGAATGGAT 375 36 100.0 30 .................................... TTACTTGAATGTCACCCTGTTCATCTACAT 309 36 100.0 30 .................................... TTGAGCAGTCGCATTGACCGACTATCGACA 243 36 100.0 30 .................................... ACAATTTAAAAATAACTAATTCAGGGGGCG 177 36 100.0 32 .................................... AAAATAAATCAAACAAAATAACATTTTCCCTT 109 36 100.0 30 .................................... TCCAAGGTGTCTGAATCGCGTCCAAGCGGT 43 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ================================ ================== 36 36 100.0 30 ATTTTGGTACTCTCTCATCCTTTGGTATAACGGAAC # Left flank : AATGCTGCAGCAGATTAAGTTGACGAAAAAGTCTAAACCGGATAAAAGACATATTTTTATCCTAATATCTCCTGAAAAAATCTTAAACGATAAAGAGTTGGTAAAACTGAATGATCAACTACAGCAATCACCAGGTTATTTTATTGTTGTAAGTGGTTTTTCGTTTTCAGGCTCTCAGAATATTTTATACAATGATCAGATAATTAATCAGGAATCTGTAACAAGCTATAAAGACACAATAAGCACCCTATTACCTTTTGTATTCAGTGAAAACAAATTTGAGAACTCTCTAAAGTGGTATATTAACTCTGTGGATAAAAGTAATGGAAACATCATAAAATTATCTCTATCGTCTGTGGATAACTTGGAAGAGTTAATTTATGTTTTTATAATGATATACGTAACTCAACTCCCGTTTACTGTTGACTACACGGGCATTCCTGAAGGTTACAAAAAGTACATTGAATCAGTAATTGAATCTGAGGTATAATGAAATTGGC # Right flank : CAATATAT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTTGGTACTCTCTCATCCTTTGGTATAACGGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.90] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [11.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA //