Array 1 14832-16102 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUET01000045.1 Roseburia sp. AM59-24XD AM59-24XD.Scaf45, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 14832 30 100.0 35 .............................. AAATTGGACACCTTGCGATGAATGCATTCGTATTC 14897 30 100.0 34 .............................. GTACAGTTTATCGGCTGTATGCAGGCTTTTTCCC 14961 30 100.0 35 .............................. ATTAGCTGCCACGTCGCATACATGAGCATGACCCA 15026 30 100.0 36 .............................. TCATGTAAGTAACGCTTACTTCCGAGTGTTATAAAA 15092 30 100.0 35 .............................. ACTCATAGTTATATGCATTATTGTTGGTTGGTATA 15157 30 100.0 38 .............................. TAAACCGTCCCCAGCACTCCGGAGCAACGCACTTTCCA 15225 30 100.0 36 .............................. ATGTTTAACGGATTCGGGACGCTTAAAAGCACAGGG 15291 30 96.7 35 T............................. AAATATACCAAGGACTTATTTGATGATGCTGTAAA 15356 30 100.0 35 .............................. AGCCGTTCCGCTATCTGTTTGACCGGAATCTTATC 15421 30 100.0 36 .............................. CCAATCATCGATAACGGCTCGAGCGTGTGCAGCATG 15487 30 100.0 35 .............................. CTTATTCTTGGCGAAATTGATCTGCTCCGGCTTCT 15552 30 100.0 34 .............................. CTATGTACACGCTCAAAAGGTCGGATTCGATTTG 15616 30 100.0 36 .............................. CCGCAAGCGGATGATCTTCACACCGTCACGCTCTAC 15682 30 100.0 36 .............................. GTAGTTCCGGCTGCGATTCAGATCTAAATTGTAATT 15748 30 100.0 35 .............................. GAATTATCACTATCGCTATCTGTTTTCCCGTCTGA 15813 30 100.0 37 .............................. TTCTCCGATCGTGAGATCCAGAACGGTTGTAGAGGTT 15880 30 100.0 37 .............................. GTTAATCACCTTATGTATCCGGCGCAAGAAAGCCTTG 15947 30 100.0 34 .............................. CCGTAAGCGCATCGGACTTTGCGTGAAGCTCCTC 16011 30 100.0 31 .............................. TTATTTTTATGATGGTATTTTTATTCCTTGC 16072 30 93.3 0 .G...........................C | G [16080] ========== ====== ====== ====== ============================== ====================================== ================== 20 30 99.5 35 GTTTTAATAGAGACATAGTGGAATGTAAAG # Left flank : TTATAGAAAATTATCAGGAAATAATATGTGCTCGATATTTGGGACAGGAAGCGAAAGCGATATTAAATAGTAAGCTTAATGAATTGACATTAAGTGTTACCTTATACAATAGAGGATCATGGATTGGCATAGACAAAGATGTTATAAAAAATACGGATATTCATCGCTCCATGTATGAATATGTTTTTGATGAGAATACCGGAAAGGGAATTGGCTTGTCTAGGAAAACAATGGAAGATGATTTTATGATGTAGCTGGTTTATGGGCAGCAGATGGATGACAGAAGTAATTAAAGCAGAAAGGACAGGGGACAAGTTATTACTGTCGATGTGGTAAAATGCATTTTGACAGGGAGGTCGACAAGATTAGTATTTATCTGCTTTGGGCAAAAGTATTGCATATTCAATGCAGGACAAATGTTTGGAAGATTAGATGGATTTTTAAGGGTCGACAAAAGAGTGTTGAAAAGGGAGGAAAAATCAACTAATATATGCATATGG # Right flank : GGTCGCCCATATCGTCATAGGCAAGCGGAGATTCGGTGTTTTAATA # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAATAGAGACATAGTGGAATGTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA // Array 1 33537-32439 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUET01000032.1 Roseburia sp. AM59-24XD AM59-24XD.Scaf32, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ========================================== ================== 33536 32 100.0 37 ................................ AAACTAGCATATTTTTGCTTTTTAAGTACTCCTCTTC 33467 32 100.0 39 ................................ AAACCGATCTGTTTCATTGAGGAAATACTCGATTTTCTT 33396 32 100.0 41 ................................ AAACTTTGTCATAATATGTATCCTCCTTTATGTGTTTGTTA 33323 32 100.0 41 ................................ AAATGGTCTGCCAGCTCGATAGCTTTTTCCTCTTCGGTCTT 33250 32 100.0 40 ................................ AAATGTGGTATTGATTAGCTTGGTTATACTCTACCACCTT 33178 32 100.0 41 ................................ GAACTATGACATAGCAATCGCGGTCTGCGCAAGCATGTGTT 33105 32 93.8 39 .............A........G......... GAACATCGCCCAGAATTCCGAAAGAATCTTGACGTCGCA 33034 32 93.8 39 .............A........G......... GAACTGATCAGTGCAAATACAACTAATGTAACCATCTGC A [33023] 32962 32 96.9 42 .........G...................... GAACACTCTCTCCTGCAATTCCGGAGGTAACTTGTCCGCCGT 32888 32 100.0 38 ................................ GAACGGGATTTTATCGGCATAATAGGCAGACCGCATTA 32818 32 96.9 36 ...............T................ GAATTGTCCTGGGTATAAACATTATTGATTTTATCC 32750 32 90.6 38 .........G..........AG.......... GAATACTACCGCGATCTATTTTGCCAAGTAGATTGACG 32680 32 90.6 40 ..............C.A.........A..... AAACTGTTATTCATTTTTGCCACCAGTCGGGAACATAACC 32608 31 96.9 37 ..............-................. AAACATGGAGCGGCTGATTCGGTCAATCTTATAGCAC 32540 32 90.6 38 A...................AG.......... GAACTCTGTCCTTGACGTTCCTGTAAATCTCCTTGTGC 32470 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ========================================== ================== 16 32 96.9 39 GTAGAAATAAAGAGACCCCGGAAAGGGGACGA # Left flank : | # Right flank : TAGAATTGTACACAATAATTTGAAAGATAAAACATGATGGGAGGTAAAAATGAGTTATTTATATGTATCGGAGCAGGGAGCGTATATTGGCATTAACGGAAATCGTTTTCAGGTAAAGTACAAAGATGGCATGATTAAAAGCATTCCAGCAGAAACATTGGAAGTGATCGAAGTCTTTGGAAAAGTCCAGTTGACAACACAATGCGTAGCAGAATGTCTGAAAAGAGGAGTTTCGGTAATCTATTATTCGATCAATGGTGCATATTATGGCAGGCTGGTATCGACGACGCATGTAAATGTGCAGCGTCAGAGGAAGCAGGCGGCGATAGCGAATGATGATGTATTTAAGGTTGATTTCTCCAGGAAGATCATATCAGCCAAGATTCGGAATCAAATGGTGATATTACGGAGATATGCCAGAAATAAGGATATTGATATAGAGCGACCTTTGGTCGAAATGCAGATAATGCAGAAGAAAGTGATATGTGCTAAGACAGTGG # Questionable array : NO Score: 2.94 # Score Detail : 1:0, 2:0, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.83, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAGAAATAAAGAGACCCCGGAAAGGGGACGA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,14] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-3.90,-3.90] Score: 0/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA // Array 1 1740-8 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUET01000067.1 Roseburia sp. AM59-24XD AM59-24XD.Scaf67, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 1739 30 100.0 35 .............................. GTATTAAAACGTGCGGAAAAATCATCTTTTAATCC 1674 30 100.0 34 .............................. ACTTGTGTAGACGTTCCACCGCTAAACATTATCA 1610 30 100.0 35 .............................. CATATCAAGACCGGTGTCACGCATACATAATTCTT 1545 30 100.0 35 .............................. TAAACATCGGACCATTTAAGCCTAATAATTTAGGC 1480 30 100.0 35 .............................. AAAAGCGTAAGTTGATTTGCACGCTTGAGCATCGT 1415 30 100.0 35 .............................. AGGATGGGGGGGATTCTGATTGATTTTGGAAGCTT 1350 30 100.0 36 .............................. ATTTCATCCGACAAACAATAATATGTAACACTTTTA 1284 30 100.0 35 .............................. CAAGGATAACATCATAGCCATATTTGCGGTGCTGT 1219 30 100.0 36 .............................. ATGTCGGCGATCGTCTTTTGTTCAGACAGATAAGCG 1153 30 100.0 36 .............................. ATATACGGAGGATATTAAGAAGTGGAAGGATGACCT 1087 30 100.0 35 .............................. AAAGGAGGTGTTGAAAAATGTATATAGACAATGAC 1022 30 100.0 35 .............................. CAGTTTCTCCTGAATCGCTTGATCCGCTATCTTTG 957 30 100.0 35 .............................. CTAATCTGAAATGCTTTTCATATCTATGAGTTTCC 892 30 100.0 36 .............................. GAACGCAATATCTACGATTGTTCGTGAAAACACAAC 826 30 100.0 36 .............................. ACATGCAATAATAAGTAACGCCCTTAAACTGTTCCA 760 30 100.0 36 .............................. GCCTTACCTGTCGTGTCGGTCTCCGTACCGGCGTGA 694 30 100.0 35 .............................. GTAGTAACATCGGGATGTATGTGTGATCCCCCGAA 629 30 100.0 35 .............................. TTACGATATCCACCGACTTTTACATCATATGAGAC 564 30 100.0 35 .............................. TTACAAGCTGTGAATCTTCGCTAAAGTGCGTCATT 499 30 100.0 37 .............................. TAAATTGGGACACACAAGCGGATGATTGCTATATGGG 432 30 100.0 37 .............................. GTTACAGAGTAGTCAAAAGCAATCTGACCGCCGACTG 365 30 100.0 36 .............................. TAATTAGTAGATATATATATACGGTCACCATAGCGT 299 30 100.0 35 .............................. TACAATAAAGCAGACACATCGAAAGATGTTATGGC 234 30 100.0 35 .............................. ACCATACCGGACACCGATACCGGTTGCTGTACTTG 169 30 100.0 36 .............................. GTTGTTGCTTAATTGTTTTAAACTTTTCATCCAAAA 103 30 100.0 36 .............................. ACTTTTCATGAGTGTAGCCCTTTTCGGCTGGATTGT 37 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 27 30 100.0 36 GTTTTAATAGAGACATAGTGGAATGTAAAG # Left flank : TTCTTCTTGATCTGGACATAATAAGTACCTTCTTTCTTTTGGTGATTATAGTATATCAGATTCATTAAGAAATGTCGCTTTCAGTGCCTTAATTTACGAGTCCATTATACATCCGGCGGAGCAGATTCACCCGGCGCAGGA # Right flank : GTTTTCGT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAATAGAGACATAGTGGAATGTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [8.3-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 44-1654 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUET01000068.1 Roseburia sp. AM59-24XD AM59-24XD.Scaf68, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 44 30 100.0 36 .............................. TTATTTTTTATGATGGTTATTTTTTATTCCTTTGCG 110 30 100.0 36 .............................. GTCGCCCATATCGTCATAGGCAAGCGGAGATTCGGT 176 30 100.0 36 .............................. GAAAATTCATAATCAAAATTGCTTTCTCCCGTTTTC 242 30 100.0 35 .............................. AGAGTTAGTCGAGATTATGTCTGCTAAGCAGTATT 307 30 100.0 35 .............................. TCTTTTTCTGCTTATCCTCCGGCGTGTCAGCTTTA 372 30 100.0 37 .............................. TACCGTTTAGAGTCAGCCACCAAGACAACGCCCGTGA 439 30 100.0 35 .............................. AGACAACGCCCGTGATCGGTATACCTGGTATATCT 504 30 100.0 35 .............................. TAGTTTTTACCTCTCTTTCATAAAAATAAGGGCAA 569 30 100.0 35 .............................. TTTTGATACATTTTCATGGCGTTCTGTGCAAGCGG 634 30 100.0 35 .............................. AACGCAAAGAAATTTAAGCGTTGGGTTACGAGCGA 699 30 100.0 38 .............................. GTAGATATATCCAAGAGGTTTGAGTTGACGTAGTGATA 767 30 100.0 36 .............................. TTATATCCACCTCCTACAAAGTTACAAGAACGTAAC 833 30 100.0 35 .............................. CTGCATGAACGAAACGGCAGTAACGCTTGAGTATT 898 30 100.0 35 .............................. TCATACACGCCCGTGCTGTTATGGATCTTAATGAA 963 30 100.0 38 .............................. GTCGACCATAAATATCGCGTAGGATATCCGTAAAAGTC 1031 30 100.0 36 .............................. AGGTGTAAAATGTGGTCTTTCCGTCACTTGTCTTGC 1097 30 100.0 36 .............................. GAAATTCAACACCATTATCCGTGGTGATTGACTTGA 1163 30 93.3 35 AG............................ TCTAAATATGCATCCCATGCACCTGCATCATCCCG 1228 30 100.0 38 .............................. AAGTCTCAAACGCAACATCCGGCACAAGAGCAAGCAAG 1296 30 100.0 36 .............................. TCATCGTTAGATGATGTATTATCCTCTATGTAGTCT 1362 30 100.0 37 .............................. TTTCTTCCAACGGCATTGTTCCATCTTCTTTTGGTTT 1429 30 100.0 34 .............................. TATTACAGGAACTTATACAGAATACGAGGAATGA 1493 30 100.0 37 .............................. AAGTCTCAAACGCAACATCCGGCACAAGAGCAAGCAA 1560 30 100.0 35 .............................. TTAAAAAAGGTTTGTGCTTTTAAAAGCACAAACCA 1625 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 25 30 99.7 36 GTTTTAATAGAGACATAGTGGAATGTAAAG # Left flank : ATGTAAAGCCGTAAGCGCATCGGACTTTGCGTGAAGCTCCTTCG # Right flank : GAATCATTATAATGGCTCAGTTGTCAAGACAAAAATTTGATATTTTTATAATGAACTGATATGTTGACGGTTGCATGGGAGAATACAATGCAGTATTTCCCAGAATTTTATATTAT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAATAGAGACATAGTGGAATGTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 1 77-1102 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUET01000075.1 Roseburia sp. AM59-24XD AM59-24XD.Scaf75, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 77 30 100.0 38 .............................. TTAAAAGGGAACGTATATCGGTCGTTATCTGTGTTTTC 146 30 100.0 35 .............................. ACTTGCATTTTTCCGTTCACGGATACGGTTTTGAA 211 30 100.0 37 .............................. CTTGCTTTTTACCGTTCACACATACAGTCTTAAATAT 278 30 100.0 38 .............................. AGTCGATGTTATGAAAAAACATAAAGTGCCTTGCCGGC 346 30 100.0 36 .............................. AACAATCACAATTACATTTTTTTTATCTGCGATATC 412 30 100.0 37 .............................. TTCTCTTCTGATTCGTCTGAGTGTCGAGAACCTCCTG 479 30 100.0 35 .............................. CTAAAACTGACATAAACCCCATCTTCTCCGAAATA 544 30 100.0 35 .............................. ACTTATATATTAGCATATTAGGTGATGTTTATCAA 609 30 100.0 37 .............................. AAACCAACATTCAGCGGTAAGTCTACTGGGAACGAAG 676 30 100.0 36 .............................. TTATTCTATAACAATCGTTGCGACATAATCATCTAC 742 30 100.0 36 .............................. CGATACGTGCAGGCTTCAAACGACTGGAAAAAAGCA 808 30 100.0 35 .............................. TCTCCCGGAACTGGGTCAGATTCAAGTGGGTCTGA 873 30 100.0 38 .............................. TGTTTTAGATCGTCCTGCCAGATTGCGTACACCGCGCG 941 30 100.0 36 .............................. CAGGCTGACGCGGGAATGATTTGGAGTTTTGACGCT 1007 30 93.3 35 ...........A.................A CAAGGCTGCTTGATACCACATACTTTGCAAAATTT 1072 30 76.7 0 .G........CAC.........T.A....T | C [1099] ========== ====== ====== ====== ============================== ====================================== ================== 16 30 98.1 36 GTTTTAATAGAGACATAGTGGAATGTAAAG # Left flank : ATAGTGGAATGTAAAGTGATATTATTTTGCTGACTTTTTTTATTTCGTCAATGTTTTAATAGAGACATAGTGGAATG # Right flank : ACTATATAATGGACTCGTAAATTAAGGCACTGAAAGCGACATTTCTTAATGAATCTGATATACTATAATCACCAAAAGAAAGAAGGTACTTATTATGTCCAGATCAAGAAGAA # Questionable array : NO Score: 3.16 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAATAGAGACATAGTGGAATGTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //