Array 1 18201-19233 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMHF01000001.1 Paenibacillus physcomitrellae strain CGMCC 1.15044 sequence01, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 18201 32 100.0 34 ................................ TCCAATTCCATTTCCATCATCAAGCAAGTCCCTT 18267 32 100.0 34 ................................ AAGTTCTGGAGTAAGGATCAAGAGCCGCGGTATG 18333 32 100.0 33 ................................ TTCGCAGCCTGGACGTCTCCGTTGATGATGCTC 18398 32 100.0 36 ................................ CTGCAGGCTGGTCAGATAATAAATGATGGCCTCGGT 18466 32 100.0 33 ................................ ACTTGGTTTTTACTCATTTTTTCTTATATTTGT 18531 32 100.0 35 ................................ CCCTCCTTTCCAAGAATTAGTTAACAACAAGGAAT 18598 32 100.0 37 ................................ ATAATTACGGGTTTGAATCCGTCCAGATACGCTTACC 18667 32 100.0 33 ................................ ATAGAAAGCCTGGTACTGTTCGTCCGTGTAATC 18732 32 100.0 37 ................................ AATTAATTTAAGGAGTGAGATCCATGACGCAAAACAA 18801 32 100.0 33 ................................ TTCAATGGGTTCGCCATGTACTTTCATGTATCG 18866 32 100.0 35 ................................ TTGGTAAGTGTTCATGTACGGCTCACCAAGCAGCG 18933 32 100.0 35 ................................ GCTACCGTGGGCAGTTGTACCGGTTTGATCACAGC 19000 32 100.0 38 ................................ CTCACGCATGGTTCCCGGTTGTAATGGCAACTAGAAAG 19070 32 100.0 33 ................................ ATTCGTAGAGTTTTTTTACAATGCTCGTTTGGA 19135 32 100.0 35 ................................ CGAACATGTTTTCATCGGCGGCGGGACGGGTTCGG 19202 32 93.8 0 ...................T.....C...... | ========== ====== ====== ====== ================================ ====================================== ================== 16 32 99.6 35 GTCGCACTCCATGTGAGTGCGTGGATTGAAAT # Left flank : GCCATGCATGCTGTTTCTGAGCTTCAGGTCGGGGTTCCTCAAACGAGTCGTGATGCCTTTGATATTTTACTTAGTCAAGGAATCATTGACGAAAAGCTGGCTGGCAATATGAAAGCCATGGTAGGGTTCCGCAATATAGCGGTGCATGATTACCAAGCTGTGCAGCTAGAGATTTTAAAAGCTATACTGAATAAGCATCTTGCAGATTTTATTGCATTTACGAATGCTTTGAAGAAATTTGCAAGTAGCTAAGCTCATGTTCAGTTAAAAATAGCCGGGATTTCTAAGTAAGTAAGCAAAGTGGTCACTTGGCCATTTGGTGCGAACCTAAAGCTCCCATAAAATCTCCGGGGGATTCGCACCTCAGATTTTGTCGAAAAAAACGCTGAATCGTACCTCAGAACATTAGCTGAGAGTTGATTGATCTAGTTGAGTAATGAGATATAATGGAAATGACTCGAATTCATCTTGTTAGGAGATGGAATAGAGGTATTTTCGCT # Right flank : TTGCTCTTCGACGGTCCAAGTCGCCACTGCTACCTTGTCTCCCTCCCCATAAGCGTGTAATTACCTATGAAGCACCAAGTTTTAACCCGCCCAGACCCCAACTGCAATTTTCAAATTTTTCTCTAGCGTTAATCCCTAAAAACTACCCTCGACCATTTCTTACAATTTGAACTTGCCTTTTCTTGCCCGTACTTCATTTGGTCCGTATTAAATCTACCAGGCAACACCAACACAAACTTCTGAAAGGAATCAAAAATGAACCATAAAGAAGAACTCACCGGCGGAAGAACCGGACAAATTCATAAAGTTGAAGAGACGGTTATTCGTCCTGCGAATGCTTGGACTCCGCACGTACATAAGTTTCTAAACTTTCTTCATGAAGAGGGGGCAGTTTTTGTGCCTAAAGCGTATGGGATAAATGATCGGCAGGAAGAGATCTTATCTTTTATGCCAGGTGAGGTTTTTCATTATCCTTTACCGGATCCAATGCTGAGCGACTC # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCATGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 47506-47807 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMHF01000016.1 Paenibacillus physcomitrellae strain CGMCC 1.15044 sequence16, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 47506 33 100.0 35 ................................. CGGCATAACGGCAAGTTAATTACTACAAGCAACGC 47574 33 100.0 35 ................................. CTCAACACGTAATTGACGGCGAGTTTTACGAAGTG 47642 33 100.0 33 ................................. ATCCGCACTGCCGGCACGTTATAACGCCTGTGC 47708 33 100.0 34 ................................. CAATCCGCTACGTGATCGCCGTCACCATCTCGCG 47775 33 97.0 0 ..........................C...... | ========== ====== ====== ====== ================================= =================================== ================== 5 33 99.4 34 GTCGCACTCCGTATGGAGTGCGTGGATTGAAAT # Left flank : GATCATCCAAATCCATGGCTCCCTGATTAGCCTCGCTGGCAAACTTCAAAACCCGAAATCGGCCTTTCTGGCCATCCAGCTCATCCGTATCGTAAACCGTAATATGGTGGTTAACGGTTTGATCTTGAAATAACAAGTGATGCAAAAGTGTAATCCTCCAATCGTCCATCGTAGGGGTTAAGGGGCTTGATAACTGCCCTTTCACCGCTACGATCTCTAACCTGATATCGAACAGTATAAGATCTAGCAGAGCCTTACGGCAAGGAGTTGGGAGGACAAGGTGACAGGGGTGGTTGATCAACAGCAGTAGGAGGGAAGAGGTGCGAAAGGGAAGCTCCCATGAAAACCCCGGGACATTCGCACCTCACAATCTGTCAGATTTTGAGGATTTTCTTGCGTTTAGTCTGAGATAGGTGAAGAATTAATGCTTTGTTGAGATAAATGTTTTTGTAAAACAAAGATTTTCATGATAAAAATAGAAAAAAGCGAGTTATTTCGCT # Right flank : TCAATTAAATGAACTGGACAAAGGGATTAACATTTGTCCAGTTCTATTTTTTTGCGTAAAGAACCAAACATGCACCTGATCAAGGGACCCTCTAATCCAAAATGGATATTATCCAAGAACATATTTGACATATTCCTTTAATGCAAAGATTTGGAATTATCGTCTGTTGAAAGGGCGCGGAGACCGATCCTGTCAGCGTTATTCAAGCGGACCGATTCGATTTTTAACCACAGCAAAAATAACATATTTACGTTCCGAACGGCCGTCACCTACACTTGTGTAAGCGCTAACAAGTTAGCGGTGGCAGCATTCAGACAGATAGCCAATCTGCTTGCCTTAGACCTCTTTCTGGGCCACGCGGCATAAGGCCATGCTGAACTTGAATCTGTCATAGGGCGTCTGCCAAACGGTCCAAGATTAAGCCACTTACTAAGAAGAAGACAGGAGGAATCTGGTAATGAGACAAAGGTTAAAACCATGGGGGATCATCCTGTGCCTGA # Questionable array : NO Score: 9.03 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCGTATGGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.20,-6.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : NA // Array 1 22553-23785 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMHF01000006.1 Paenibacillus physcomitrellae strain CGMCC 1.15044 sequence06, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ====================================== ================== 22553 31 100.0 35 ............................... TCGTGTCAAGGCCGCATTATCCACGCTTTCGTACG 22619 31 100.0 36 ............................... CAACCGGTTGTCGCCCGTTAAATTGCCGTACGCACG 22686 31 100.0 34 ............................... GATCGCGTTAATCGTATCTAAAACGTTGTCATCG 22751 31 100.0 34 ............................... ATTTTCACTTGGAACGGCGCGTTCGAGAATGTAG 22816 31 100.0 36 ............................... CACTTTTGCTGCGTCAATCTGCGCCTGGATATCGGG 22883 31 100.0 36 ............................... GGTTATTCCTACGCCGTAGCCCTCCGCGATATAGGG 22950 31 100.0 36 ............................... TTGACTGTCCGCTACGTCCAAAATCTCAATAACGTG 23017 31 100.0 34 ............................... ATCGAATATGATAATTGAGCCGTGAACGTCAGCG 23082 31 100.0 36 ............................... CCAACATAAAAAAAGCTCTTATACTTGGAGACAATG 23149 31 100.0 36 ............................... TTTATCCGAGTCATTGAAGCGTTGATTCCGCGTCCG 23216 31 100.0 34 ............................... AAACAACGGCTATACATCGGAGTTGGAAATGGCG 23281 31 100.0 36 ............................... TGCAGGCTGACCGCATCCAGGTCAGCCACCACAATG 23348 31 100.0 38 ............................... CGTACTAAACAGGCCGATGGTTATTATTTACTTCCGGG 23417 31 100.0 36 ............................... TGGAATGCGTATCCTCGAAAAATAGGAAAAGTCGAG 23484 31 100.0 38 ............................... CGGAATACGATTCAAACTAGCAATGGCCAGTGGGTAAG 23553 31 100.0 38 ............................... CCTGTAAACACGCCGGTGAGAAAGTCCATCACGCCTCG 23622 31 90.3 34 .......T..C..A................. CGGACGACGCAGTGTACGAATACGCGAACGAATG 23687 31 87.1 37 .......TC.C..A................. GCATAAAACCTAATAGATTCCAGCTGCACCCACGTAG 23755 31 71.0 0 .......TC.C.CA...........C..TTA | ========== ====== ====== ====== =============================== ====================================== ================== 19 31 97.3 36 TCGCACCCTATGTGGGTGCGTGGATTGAAAT # Left flank : GGATGAATATCCTCCATTTTTGTGGAAGTAGGTGTTGGACGATGATGGTAGTCATTACTTATGATGTTAGAACCGTTGACTCCTCAGGACAAAGAAGACTGCGGCAGGTGGCTAAAGTATGCCAAAATTATGGCCAGCGCGTGCAAAATTCTGTGTTCGAATGCATCGTAGATGCTGCAGAATGGGCAGCGCTTAAACTCAGGTTAATTGAGTTGATTGATCCAGAGCAAGACAGCCTGCGATTTTATCAGCTTGGGAACCAATACAAAAATAAAGTAGAACATGTAGGAATCAAGACTTCGCTTGATTTGGAAGGACCCCTGATTTTATAGTGCGAATGTGAAGCGAACATGATTTCCCTGGGGGATTCGCACCAAGAAAAACATGATTAATTTCATTTTATGGTAAAAATAAACAAATATCTTATGGGAAAAGATTGATTTTGGAACAAGTTGAGTTCAAAAATGCGATTTTTACCCTTAATTTGTTAAGAATCGCTG # Right flank : AGCTCCATGGATTATCTTCAAACTGCCCTGGTTCACCTCATGTGCGTACATAGGGATTTGAAGTATTACTTTTTAACTTCTTTCCAGGCAATCAGCAATTCATATTATTAATTATAGCTTTACGCAGTTATGGCCTTTACGCAGCTACATCAGCTTAAAATGGAGTAAGCCCCATTTAATAAAGCAAGTAGGGCTGAAGATAAGAGACTTAGCGGAGATCATCAAATTGAACTTGCTGGAAGCAGTGGAGGCCTTATTTCAAAGGGGAAGCGCTTTCCATATTCCCATTCAGGGAATCTCTTTTCACATCGTTTCTTTCTTTATCACTAGCGGGATTATCGACAGGGTTTAAACGATCGACGATTGGATCAGATGGTTTAGCTTGGGATGAAGAATCGTTTAAGACAGTGCTATAACGCATACGAGCAGCATGGATGCAATTGCTAATATAACAACTCCTTTTCTTTTCCCTCCTTTTAAATAAATGGTCACTCTGATCA # Questionable array : NO Score: 9.12 # Score Detail : 1:0, 2:3, 3:3, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TCGCACCCTATGTGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched TCGCACCCCATGCGGGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.50,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-16] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //