Array 1 137332-137109 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP039215.1 Piscirickettsia salmonis strain Psal-104a plasmid unnamed1, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== =========================================== ================== 137331 24 100.0 43 ........................ TTATTTTTTAGCGTCTGTTTATTTTCGGAGATAAAACCTAATT 137264 24 100.0 41 ........................ TATCTTTAGAATTTGATTTAATTACTTTTTCTTTATTTAAC 137199 24 91.7 43 ....A...............A... TATTTTTTATCGTCTGTTTATTTTCGGAGTTAAAGCCTAATTT 137131 23 95.8 0 .................-...... | ========== ====== ====== ====== ======================== =========================================== ================== 4 24 96.9 43 TTGTGTTCCGTTTGTGTTCCGTTT # Left flank : GATTGTTAAAGTGCACTTTTTTAAAACCAAACTCTTCTAATCCGGCTAGGTCTAAATCAGAAATAACAGTGCTTTGATTATCAATTTCATGTTTAGGTACTGTGTGATTATTTTCTTCAGGTGACTCACTTAACAGTGAGTTTTTAATCTCAAAAAAAACTCCTCTTTGTAACCTATATGAAACCCAACCACCTCTACCATCTTTTCTTGAACTGATAGAAATATAGTACTTATCTTTTAATCTAGCAATTGTTGTTTTAATTGATCGGCTATTTACACCAGCCTTATTCGCAATTCCATTAATAGTAAGTTTTCCAGTAGTAAAATCCATATTATTTTCTTTAGCACTGTCATACATTACCATTAAAACAGATTGTTGTATCGAAGATAATAAATCAATAGAAGGCGTTTCATCTGCTATAAAACCACCGTTAAACTTTTTAGGTTGACTTTCTAGCTTCTCAGCAGTTCCACCTTTCAGTGCATCAGCAGTGTTCCGT # Right flank : GTGTTCCGTTGACATTTTCCAAGCCCGTCTCATTTGATTTTTCGATATCCTTTTCTTCACTAAGAATTAAATCATTATGTTCGTTATCAGTTCTTTTTTTAGAAGAATTATTATTTGATAGTGCAGACGTATCACCAACCCTTACACTTCTAAAAAGAGCATTAAACTTTGATTTATTCTTTTTACTTGAGCCACTCATAGCTTACTGTCCTTAGCTCAACTTAGTCCAAAGTTCTTTAGAAAGATTATAGTAATCGTCAGCTAATGATGAAGTATTACTATTTTCAATTACCGATAACTGCTCCATCCCACTTTCCTCTGCTACTCCACGCAAAAACCTAATTGATGATGCAGTAACAAACTCTGGAAATAAAACTCGGTATTGGGTTTCAATTTCTTTACTAAGTTTCGTTTGATCTACTTTAGTTGGTACAATAGAAAAGCTATTCCAATTCAGTTCCATGTCTCTTTTAAAATCATTAATCATTTCAATATTAGTT # Questionable array : NO Score: 2.51 # Score Detail : 1:0, 2:0, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTGTGTTCCGTTTGTGTTCCGTTT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //