Array 1 186792-184879 **** Predicted by CRISPRDetect 2.4 *** >NZ_LODL01000040.1 Dechloromonas denitrificans strain ATCC BAA-841 contig040, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================== ================== 186791 37 100.0 30 ..................................... CGAGCGCGGCCAGGATGCGGTCGGCGACGT 186724 37 100.0 30 ..................................... AGCTGGGCCGAAAGAACAGCGGCGCTCCGT 186657 37 100.0 30 ..................................... CTGCCTTGCAGCGGCATTCATTCTTTTCCG 186590 37 100.0 30 ..................................... TTGAACCAGTTCAGTTCGAGCAGCGGCGGC 186523 37 100.0 30 ..................................... ACGTACCTGGTTGATCAGCTCATTGAACGG 186456 37 100.0 30 ..................................... CTGCCACTTTGGCACCCCGTTATCGTCCCG 186389 37 100.0 30 ..................................... CCATCGTTCAGGCACCGACCGCCAGTCGGC 186322 37 100.0 30 ..................................... TCGATTTATACGATGCTGCTTTGATATGGA 186255 37 100.0 30 ..................................... GAACTTCTTATCGGCCAGGCCCATCGGCGA 186188 37 100.0 30 ..................................... CTTCAGGTAGCCCAGGTCGGAGGGCTTCTT 186121 37 100.0 30 ..................................... CTTCAGGCCGCCATGGGTTACGGCACACCA 186054 37 100.0 30 ..................................... GATCAACCACCGACTTCGACACCTTGCCGT 185987 37 100.0 30 ..................................... CATTCAGGTGCAACGGATGCGCGTCGCCTA 185920 37 100.0 30 ..................................... AGCTGAGCGGAAAGAACGGCGGCGCTCCGC 185853 37 100.0 30 ..................................... GCTCGGCCTTGACTGGTGAAGTCAGTAGGC 185786 37 100.0 30 ..................................... CCGGGCCGACCGCATCAGCACCTCTTTCAC 185719 37 100.0 30 ..................................... TCGCCGTTAATCACTGACACCTCACCGATG 185652 37 100.0 30 ..................................... TTCATATTTTCGAAGGGTGTTTCGATGCTT 185585 37 100.0 30 ..................................... GGCGAAGGAAGCCGCTACCGAGTTGGCCAG 185518 37 100.0 30 ..................................... TAGTTGCGCCTGCTGAATAACTTACGGAAG 185451 37 100.0 30 ..................................... CGTCTGCACAGTGGGAACATATCGCCCAGA 185384 37 100.0 30 ..................................... CGAATTGAACTCGCGGCCCTTGTTCTTCGG 185317 37 100.0 30 ..................................... ACCGTGACAGGGGTCGGCGAGACGTCGACA 185250 37 100.0 30 ..................................... GTAGCGGACAATGCTGTCGTTGGGGTCGAC 185183 37 100.0 30 ..................................... GAAGCCTGCCGTCGAACTGCCGAAGCGGCA 185116 37 100.0 30 ..................................... GGTTTTCACCGATCAGTTCTTTCAGCTGGT 185049 37 100.0 30 ..................................... CCGATGGAACTGCCGGTGCTGGAAATCTCC 184982 37 100.0 30 ..................................... CCTCGGGGCGCAAGGGGCGCTGACCAGCCA 184915 37 94.6 0 ...................................TT | ========== ====== ====== ====== ===================================== ============================== ================== 29 37 99.8 30 GATTGTAGCTTTCCGGGGTGAGAGAGGGAGCTACAAC # Left flank : AATACGCAGTCGAAAGTCTCGCCCGACTATTCGAGCAAGGCGACAGCGAACTGGAATTACCCACCTTGATCGGCTTGCACGCCCACAGGCTGGAATGTTGAGGCATGGGACTGGAGACACGACGCTTCATGCGACTCATCGTCTTCTTCGACCTGCCCATGGTCACCAAAACCGAGAAGCGCGCCTACGTGCAATTTCGCCGCTTCCTGCTCAATGACGGCTACGACATGATCCAGTGGTCCGTCTATGCGCGACTGCTGAACGGCAACGACGACCACGAAAAACATTTGAAGCGCCTGGTCGACAGTCTGCCGCCCGCCGGCTCCATTCGCTGTATGACCGTCACGGAAAAGCAGTTTGCCGGCATTCGCCTCCTGGTCGGCATGCCCCTTTTTCAGGAAAAAAAGGTTCCGGCCAACCAGATGCTGCTGTTTTGATCCCGGATTTAAACAAAAAAATTCCCGCCCAGCTTACGCCGGGCGGGAATTTCGATTGCGTCA # Right flank : GTCCTGAATCAGGCGGCAATCTGCCACTTACCTGCCGTTAAGCCTCTAGTGATGGTCAATGACCGCTTCCTGGCGGCCGGTCGAGTAACCGAGGTGCTCAAATCCTTTAACAAACTTTGGTATGTTAATACTTTCTAAAGTTACGCTTAGCAAGTAAAAGGCTATTATTCCTTTCATGAGAAAGTCTGACCTTCACCCCCGTCTACAAAACACCTGCCATGCGATACCGGATCGCTCGGGTTGCTTTGCTGTTGTTCCAGAACCCGTTCCAACGTCGGTGTCCGCACCAAGCTGTTCTGCACTCTTTGTACTCGCGCGACGAGAGCTGGAAGCCCTAAAGGCAACGATCGAAGCAAACCCCGAGATGGCACGCCTCGTATTCCACATGCTTAACAGACGGGAGGCTGTAGACAGCAGCCAGATTGAAGGTACCCATACCGGTTTTGATGGCCTCCTCATTCATGAAATAGAAGCAAGCTCGTCTTCCTTGCCTGAGGACG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTGTAGCTTTCCGGGGTGAGAGAGGGAGCTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [8,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.30,-5.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.15 Confidence: HIGH] # Array family : NA //