Array 1 8366-7603 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB905865.1 Propionispira raffinosivorans DSM 20765 F606DRAFT_scaffold00027.27, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ==================================== ================== 8365 31 100.0 36 ............................... TATATATTGCTTGATAAACTTGCCGAAAATCCTATA 8298 31 100.0 36 ............................... GGGTATTCCTGCATCTCGTTTTAACTTTATAGCGTT 8231 31 100.0 35 ............................... TTACTCCTGGAATTGAAGCGTTAGGCAGAATGGCA 8165 31 100.0 36 ............................... GAACATAAGTTTAGACGTTGCTTCTGGGTTAGATGC 8098 31 100.0 36 ............................... GTGGGTAGGAGAACAATTATTCATGCTTATCAATTC 8031 31 100.0 35 ............................... ATGAATTGGTATATGATGATTTTTGGAGTAATTTT 7965 31 100.0 36 ............................... AGAAGAACACACCGCGTGGCATAAAGGAATTTTGAC 7898 31 100.0 35 ............................... TGTGAAGATAGTGGTACTTGTAAGCTATATCTAGA 7832 31 100.0 35 ............................... GTTGCTGAAGCTTGTTGTTGAGCCGCCATGACTGA 7766 31 100.0 36 ............................... TTTTAAAATCGGTGTTATATATGACATCATGTCGCC 7699 31 100.0 35 ............................... GCACATAATAACCGTGCAAAGCGAAAAATATTTAA 7633 31 96.8 0 .............................T. | ========== ====== ====== ====== =============================== ==================================== ================== 12 31 99.7 36 CTTTCGAATTGACTCATAGTGAAATGTAAAT # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATAGTTA # Right flank : ACAGAGTTGAAATAAAATCAGCATTGGATTGCCCAAACTCCTGTATTCTTGGTGTTTGTGGCTGATTTTTATAAAACTAGTATCGCGGGTTAGAAAAACAAAATACCTTCGCTGATTAATGAAAGTGTTGAAGGCACGATGGTAGGAACTTTTGACTGTGGACTTGCCATGGGGGGCAGCCATTGTCGTGGCAGAGTCTATGGGGCTTGGAATCGTGCCAATCGGTGCGGTACGGAGAAACCCCGAAAAAATGATTCATTTGTTGAATTTTCCAGAGCGTACATTCCCTGTGGCATGGCTTATTGTGGGATATCCTAAAAATAATTCAGCACAAAAAACCTAGTTTCCTATTGCATGTTATTTGCACATAATGAAACTTATCAGGCTAAAGGCATGAAACAGGCGGTAGATAACTATGATATATTAATGGCGATTATTATAGGAAGCGCGCTAGCGAAATTGGGAATATTTGAGTTGTTTAATCTAGAAATACAAAGCCT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTCGAATTGACTCATAGTGAAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.30] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-10.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 1 23401-22701 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB905874.1 Propionispira raffinosivorans DSM 20765 F606DRAFT_scaffold00036.36, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ===================================== ================== 23400 31 100.0 36 ............................... GTATCAAGCGCTCGCATTATAAAAGTTTGAGCCTCA 23333 31 100.0 36 ............................... TTATACTTTTTTTATTCTGCGAAACTCATTTTTCCA 23266 31 100.0 37 ............................... GTATGAAATGGAGTACACACGGCAACGTAACGCGTAT 23198 31 100.0 36 ............................... TGGCAACATGTTTGCAACCGATGCAGTGATTCCACC 23131 31 100.0 35 ............................... GAGTGTAGTGCAACTGACTATTTAACTATTTACAA 23065 31 100.0 37 ............................... AGGAATCGTAATACGTTATCACGCTTATCTGCATCGC 22997 31 100.0 35 ............................... GGAAGATTGCGGGATTTTGTTTCAAAAACAATAGA 22931 31 100.0 35 ............................... CGTTGTCGCGTGCATGCTGATTGTTTTTTCTTTGT 22865 31 96.8 36 .........................A..... TGTTTCTACGGTACCATCAAACCACGTTGTTGTATC 22798 31 100.0 36 ............................... TGGCTTATTGAAGCGAGGAAAGCGCAGCGGGCGGGT 22731 31 96.8 0 ..................G............ | ========== ====== ====== ====== =============================== ===================================== ================== 11 31 99.4 36 CCTTCGAATTGACTCATATTGAAATGTAAAT # Left flank : TAAAGCCTTTAGAATTTGGTGGTGATGTTATTTTGTATATGGTACTTGTATATGATATAAAATTGGATAAAGAAGGCCCGAAAGTTTTAAGGCGTGTTTTTAAGATTTGCAAGAAATATTTGACACATATCCAAAATTCAGTATTTGAAGGAGAGGTATCAGAAAGTCAATTGATGAGTTTAAAGGTAGAAGTGAAAGAATATTTACGGGAAGAAATTGATTCTTGTATAATATTTACGGGGCGAAATAATATCTGGATGAAAAAAGAATTTATTATAAAAGAAGAGGATAAAACATCAAACTTCATATAATCTGTCGATCTACAATAATGCAATTTTATGAGGGGTACGACAGCTTTTCATATGTGCTGTATTTAGTCAGTTAGCGGCTAAAATAATAGAACTTTTTTTGTGATTTATGTGGTAGAATAATATATTATTATAGCATAGACAGAAAAGAAGGATTCCTATACTGAAAAATAAGGCTTTATGTATGTTCAA # Right flank : CTAGGTATTGTCAGTGCCCGACTTGTGGACAGTCAAAAGCGGCATTTGAAAAGAAAAAAAGGTAACTAATATAAAAAACGTAAGTGAATTCCATACAGATAAGGATAAATTGGAGGGCTAATGATGAACAATACAATAAAATCAATCAAAAATCATAGATCAATTCGGAGTTATTTAGAGAAAGATATATCATCTGAAATGCTGGAAGCAATCTTAGAAGCCGCACAGGCGATGCCTACTTCCATTAACGGACAGCAACTATCGGTGATTATTGTAAAGGATAAGGTAAAAAAAGCTAAAATTGCAGAATTGACAGGAAATCAGCATTGGATTGCCCAAGCTCCTGTATTTTTGGTGTTTGTGGCTGATTTTTACAAAACTAGTATCGCGGGTGAGAAAAACAAAATGCCTTCCCTGATCCATGAAAGTGTTGAAGGAACGATGGTAGGAACTTTTGACTGTGGACTTGCCATGGGAGCAGCTATTGTTGCGGCAGAGTC # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTTCGAATTGACTCATATTGAAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.18 Confidence: HIGH] # Array family : NA //