Array 1 974-1511 **** Predicted by CRISPRDetect 2.4 *** >NZ_NMSL01000117.1 Vibrio metoecus strain OYP9B09 Vm_OYP9B09_Contig_125, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ======================================== ================== 974 35 88.6 38 TAA..................A............. ACAGGTTTAGGTAACATTGATGATCTTGACCCTAGAAA 1047 35 100.0 35 ................................... CCATAGTTTTGCGCCCTTGCGCCTCCTCTCTTTTT 1117 35 100.0 40 ................................... CCAAAATCTTCTGGGATGACAAAGACAAGCAATGGTACAT 1192 35 100.0 35 ................................... CTATGTCGGAGATTTAATTCAAACACAAAAATACA 1262 35 100.0 35 ................................... TACACCAGGTACGCCTGAATTCGAATTCCAAATGG 1332 35 100.0 38 ................................... AAGAAAAATTCATTCGAATTGTATTTGTGTCAGTATTG 1405 35 100.0 37 ................................... ATACCGATGCATCAATAAGCAAAGTGTTGATAAATCC 1477 35 74.3 0 A.......CT.......A.GA...A.....A..T. | ========== ====== ====== ====== =================================== ======================================== ================== 8 35 95.4 37 GTCTCAACGGTCTGAACGACCTTATCTAATGAAGC # Left flank : CCTTGTAACGTCAGCAGGGTAGCGAAATCATTCACCACATAAGAGAGTGGGTGAGGCAAATACTGCGAGCCACCAAATAGCTGGCAAAACAGCACCCAATCGTAAGCTGGGCAATCAGCCCACAACTCTACCTCATCATACTGGCTTAACCATTGTTTCAGCTGGTGGGCAATATTTTCATCACTATCAAAACCATACAGCACCTGCCCCTCTTGCCTCCACTCACTTGGCGCGCAACAAGGTAGGGATAACCAGCGAGTATGAGCAAGCACATGTTCTGTAATCCAGGTATCCACTGGAGCGCTATACCTTGCTTGGCACTCTGCATAAAAAGCCCTACCGTGCTCATCGACCAATGCAAGGCTGAGTAGCCCAGCGTCTTGCTTTAGGCCTGTAAACTCGGTATCTAAAAATAAACGCATACCACTTCCAAGTTATCGCTGTTGCCTTAAGTATAACTAGGTTCACCACCAATACCGAGGATCAAATCCCATCCTAAA # Right flank : ACAAAGGTAGACTGATCATTATAAAAATGATAAGCGGA # Questionable array : NO Score: 3.03 # Score Detail : 1:0, 2:0, 3:0, 4:0.77, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCAACGGTCTGAACGACCTTATCTAATGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.29%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.00,-5.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [4-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0.37 Confidence: LOW] # Array family : NA // Array 1 12288-9018 **** Predicted by CRISPRDetect 2.4 *** >NZ_NMSL01000023.1 Vibrio metoecus strain OYP9B09 Vm_OYP9B09_Contig_52, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 12287 28 100.0 32 ............................ GTCCAGATTTTTCGATTGCCGCTGATGGTAAC 12227 28 100.0 32 ............................ AGGTGGCGACATGTGGGAAGGCATCGCCATCC 12167 28 100.0 32 ............................ TCAGGCCGTGATCAACAGACCAAGTCAGTCTT 12107 28 100.0 33 ............................ CTCGGTGGCATCCTTTGGAAAATCGACAAACGT 12046 28 100.0 32 ............................ CAACCGTTAAACCTTGCGAGAAAATTACTGAG 11986 28 100.0 32 ............................ TTGGCTGCGTGAGCAATGTATGATTCCGTGTC 11926 28 100.0 32 ............................ TCCTTGTGTCTAAAAACTTTTGCCCTACGAAT 11866 28 100.0 32 ............................ ATGCCAGAGGCTTACAAGGAATATAGCCAGAT 11806 28 100.0 32 ............................ GCAATCTGGAACGTTAATCACATCAGCAAAGA 11746 28 100.0 32 ............................ TTAATTAGCTTTCCTTGCACTTTCAAAGTGAC 11686 28 100.0 32 ............................ ATCTGTTCTTGGAACTCTTTGGCGCGCAAAAC 11626 28 100.0 32 ............................ AAATGGCTTGATGCCATGAGCGTAGCGGGAGG 11566 28 100.0 32 ............................ ATGAAGTAGTCGAACTTTCGCGCCGAATGCTG 11506 28 100.0 32 ............................ GAGGGGCTTGCCATTGTCAAAGCCGCCCAGCT 11446 28 100.0 32 ............................ AATAGGCCACCGTGATCGCGTCAGATAAAAAG 11386 28 100.0 32 ............................ GGCAGTGCGCCCGGTTAAGATGCTCTCTTTGA 11326 28 100.0 32 ............................ CATTCGAGGACGAAATCCGCGCAGACAATTGC 11266 28 100.0 32 ............................ CTGATGGCCTGCGCAACATAAGCATTACCATT 11206 28 100.0 32 ............................ GAAACGTTAGCTTGTGCTAGCTCGGTTGATGC 11146 28 100.0 32 ............................ GCAAGTATGACAACGCCCCGTTGTTTACGTAT 11086 28 100.0 32 ............................ CTCATCTGCACCAATCAACTGATAAAGCACCA 11026 28 100.0 32 ............................ ACTGGTCAGGCTGATGCTTATTACTCTATCCT 10966 28 100.0 32 ............................ TGCTAGGGAAAAACGAGACAGTGCAAGCTCAG 10906 28 100.0 32 ............................ ACTAATAAGTGCTGGCACTCCTTTTGTTGATG 10846 28 100.0 32 ............................ TAAGTAAATGAGTTGATTGCTGGCACTAATGC 10786 28 100.0 32 ............................ GGTATTCTCGGCGGCCAGTTCTCTGGTGAAAT 10726 28 100.0 32 ............................ GATTGCTCGCCGAGCACTTTGAACTCGCCAAA 10666 28 100.0 32 ............................ GCTAATCGAGGCACTAGAGGGGCAGAAGATGA 10606 28 100.0 32 ............................ CTAGAAGAGCTGCGCATCCTGCAAGAAGAGAC 10546 28 100.0 32 ............................ ATGCACAAGCAAGGCTTCGTGAAGAACGGCAG 10486 28 100.0 32 ............................ TTACCCAAAAGGCAGCGGCCATAAAGCCACCT 10426 28 100.0 32 ............................ TGTATGAACTCGCGATGGAACTCGGCCTAGAC 10366 28 100.0 32 ............................ TGTCACCCACTTTTGCATCAGATTCACTAATC 10306 28 100.0 32 ............................ GTATGATGACGCAAATAATTAGCGTGACGCGT 10246 28 100.0 32 ............................ AGAATCGGCAAGACCGGGATTGGCTTTCATTA 10186 28 100.0 32 ............................ TCAGTGAGATAGAAGTCACGGATTAGTAACGG 10126 28 100.0 32 ............................ GAATAAACAACGCCACAATCACGTTCAATGTA 10066 28 100.0 32 ............................ CAAAACCTCACCAAAACGCACAGGAAGCATTT 10006 28 100.0 33 ............................ TTTCAGCAGCTTGCCGCGCCCTCGTTTTCGTTT 9945 28 100.0 32 ............................ TCGCCAAAGCAAACCCCAATATTGGGGTTTCT 9885 28 100.0 32 ............................ ATTGAACCAACGCACAAACACGTTGTGTTGGT 9825 28 100.0 32 ............................ TCACGGCATCAAGTTTGATAGTGTTTTGACAG 9765 28 96.4 32 ...........T................ TTGCAACCTCATAGCCTTTTGAAACGAGGTTA 9705 28 96.4 32 ...........T................ AATGGCAAGCCCTATCGTGAATGGGAAGTGAT 9645 28 96.4 32 ...........T................ ATGACGAGTCACAAGGTAGCCAGTGTGTGAGA 9585 28 96.4 32 ...........T................ GCACAGTCGCGTGGCGCGTCCTCGATGCCCAA 9525 28 96.4 32 ...........T................ TTTGAGGATTTTAAGCGTACCGGACACGTCAG 9465 28 96.4 32 ...........T................ GTAAGATTTCAGCGCTTTGTCGTGCTCTTCGC 9405 28 96.4 32 ...........T................ AGTTTGGCGCTGCAACACCCTTGCTATTTACC 9345 28 96.4 32 ...........T................ ATCGTTTCCAAGCGTCTGAAAGTTTCATAATT 9285 28 96.4 32 ...........T................ ATTGAGCCACCAGCCATAAAAAGATCGTTTTT 9225 28 92.9 32 ...........T........A....... TCGCTTTGGTTTCGTTCCTGCTGCCTTTTCAC 9165 28 100.0 32 ............................ TTTGGGGATGAAAGACAGACGCAACTTGAATG 9105 28 100.0 32 ............................ GAGAAAGTGTTTGATAATCTCGGTTTGCTCAT 9045 28 85.7 0 ...........T.T...........TT. | ========== ====== ====== ====== ============================ ================================= ================== 55 28 99.0 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : GATATAACTTACCTAAGCTTTGTACGCAAGCAGGTGAAATCACCCGAGCGAATAGAGCGCGATATGCAGCAAAAAGCCGAACTATGGGCAGCAAAATCCGGTAAACCGCTGGTGGAATGTTTAGCAGCTTTGCAACAAAGCAAGCCGACAGCGTTGTGTACCTTGCCCTTTATTTACTTGCATAGCCAGCAAACCAAGCAACGCTCACCAGAAAAAAACAGCAAATTCCCGCTGTTTATTCAGATGAAGCCACAAAGCACATCACAAGATGGGGGCTTCGATTGTTATGGTTTGAGTAGCAAAGCGGATGGGCAGTCAATGTTGGCTACCGTACCGCATTTTTAAAATGAACGAAAAAGGGTAGTTTTTACCCTTTATTTTTGCTCTTTAAAAATGTGCTTTTAAAACAAATGGTTGCAACGGGTTGTTTTTAACAAGGTAAAAAGATGTTTTTTACCCTAACAGCTTGTTGCAGCTTATTTTTATCGGTTTATTCTATT # Right flank : GAAAGTGAACCAAACGATGCAGTTCACTTTCAACATTTTAATGAGGTTCCTACTTTATATTGTGCATATTCATTATGACCTGCCTAATGGTGCTTTCGATATCAGGAGTCACCTCTTTTCGAGGTGTTGCGAGTTTTTTCAAGAGTTCTGCCTGGCGGTAGTCGGAAACATCACCATAGCTGTAAAAAGTAGTCAGTACGCCTTCATGACCTAAGTTTTGGCTCCAAGCTTTAAACTCTTCCGCGTTGCTACATAATTGCTCCCCTAAACGAGCTAGTGTGTTGCGAAAGCTATGTGGGTTGTAATAAGGCAATCCTGCTAGTTTGAAACTTTGCTTGAAGATTCTTCTGATTGGGTTTGCTGTTGTCCAATGCTCTTTTGTTAATCCCATGGCTTCAAACTGAAAGTTGGGGCTGTTCTTCACTTTCGTTTTTGGGAAAAGGGGAGCTTCTGGGCCGAATGAAAGCTCATTTGTTAGATAACTCACCCATTCGGTAACT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //