Array 1 76719-80536 **** Predicted by CRISPRDetect 2.4 *** >NZ_AKJY01000027.1 Chryseobacterium populi strain CF314 PMI13_contig_30, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 76719 47 100.0 30 ............................................... AGCCCAATCAACAGCCATGATTAAGAATCT 76796 47 100.0 30 ............................................... ATTAAACAAATAGAAGAAATAATAGGACAG 76873 47 100.0 30 ............................................... GTTAATGAAAATACCCCTTTTATCCAAGCC 76950 47 100.0 30 ............................................... GATGCATACGAGCATCATCTGGATTGACTC 77027 47 100.0 30 ............................................... TATTTAGGTTAATAGATACTTTGATAATAT 77104 47 100.0 30 ............................................... GAGTGATATAAAACCCCAATGGAGAATTCA 77181 47 100.0 30 ............................................... TTAATTTCACCATAATTAATTCCAGAATCT 77258 47 100.0 30 ............................................... TTTCTCAGCAATGTTCGAAAAATGGGGTGC 77335 47 100.0 29 ............................................... TTTTGCCAACCCAACTGCATGTGTTGAGG 77411 47 100.0 30 ............................................... TATGACTTGGGAAGAGTTTTACAAGGAGAA 77488 47 100.0 30 ............................................... TTTACGTAAAATATAACTTTGCCCGCTACT 77565 47 100.0 30 ............................................... TTCCGTATGATAGATATGAAAGTATAATTA 77642 47 100.0 30 ............................................... AGAACAAGTTCCTTGCCTTCTCTTACAGAT 77719 47 100.0 30 ............................................... TTCTTTACACCGTATAATTCAGGCATATTC 77796 47 100.0 30 ............................................... TGAAACCGAAGTTTCTCTTTCTACGATTTT 77873 47 100.0 30 ............................................... ATTGATTAGTTAGCTCTCCAGTACTTCCGG 77950 47 100.0 30 ............................................... TAAATGGAAATCTACTATAACCCCTCCTTA 78027 47 100.0 30 ............................................... GCCATAGCTTTATAAGCTAATGTATTTTCT 78104 47 100.0 30 ............................................... GTATTAACGCTAACAGTTTTAACCTCATGT 78181 47 100.0 30 ............................................... TTTTCTTATTTTTATAGCTACTCGCATACC 78258 47 100.0 30 ............................................... CCGCGGTATTGATTGCAGTTACGGAAGTAG 78335 47 100.0 30 ............................................... ACCGTAGTTAGTTATACGTTTTCCTCTGCC 78412 47 100.0 30 ............................................... CAAGCTCTGTTGAAACGGAGTAAGCGCACT 78489 47 100.0 30 ............................................... TTTCGTTGAGAAGAAAACAACCATCAAAGA 78566 47 100.0 30 ............................................... CCTATATACGGAACATTAAGAGGTCAACCA 78643 47 100.0 30 ............................................... TTTCTTTTTTTATCAAATTTAACAATCTCT 78720 47 100.0 30 ............................................... TAACTCCAGTTTTTGACTGTCATACATTTT 78797 47 100.0 30 ............................................... ACAGTTCTAAATAACGTTAGGTCGTACGGA 78874 47 100.0 30 ............................................... TTTTATCTTTCCGGACAAAGCAATTTTGTA 78951 47 100.0 30 ............................................... ATTTGATTTTGTTTTCTTCTGCCATGACTT 79028 47 100.0 29 ............................................... ATACAGTTTCACAGGGGGCGGCGACGCTT 79104 47 100.0 30 ............................................... ATAAATTTATTTGTTTGTGCTACAAATGTA 79181 47 100.0 30 ............................................... TTATCAAGGTTATTTGTTGCTGAACTCCGA 79258 47 100.0 30 ............................................... TAGCACTTAGATTACCTGCCTGAGTATTTT 79335 47 100.0 30 ............................................... TCTCGGAGAAGAAGTAGGAGAAGTTAATCG 79412 47 100.0 30 ............................................... TCGCTACTCCATTAGTAACACTAATTTGTA 79489 47 100.0 30 ............................................... TTCAATTAAATCAATTGTAATCCCTTCCAA 79566 47 100.0 30 ............................................... CCAACTCCTCAACCACTCTTTGCTGATGTG 79643 47 100.0 30 ............................................... TTGATAACATTCGTTGTAAGTTCATTTTGG 79720 47 100.0 30 ............................................... TCAAATTGCAACTTTATATGAGGATAGAAC 79797 47 100.0 30 ............................................... CCTTTCAAATTAATATAGTCTGTTTGTTGA 79874 47 100.0 30 ............................................... GGAGGTATATCAATTGCGGCACAGAGTTGC 79951 47 100.0 30 ............................................... AGAGAAAATTTTAGGTTGGTATATCGACAG 80028 47 100.0 30 ............................................... AAAAACCTATATCTATTTCTGAACCATTCA 80105 47 100.0 30 ............................................... TTCTTGATAGATACATCCATGTTGTTCCAT 80182 47 100.0 30 ............................................... GTTGACGTCCAAAGATGCACGGATCCGGTT 80259 47 100.0 30 ............................................... ATATTACTTTTCAACCACAAACAATGCTTG 80336 47 100.0 30 ............................................... TTTTCGTAACTGTAATCATCATTATTTAAT 80413 47 100.0 30 ............................................... TTCTTGATAGATACATCCATGTTGTTCCAT 80490 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 50 47 100.0 30 GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC # Left flank : CTTCTTTGAATTGAATGGTTTCCGGGGAATTTTCTAACTGTTCTAATAACATAATAATTAATTTAGTAAGGTAAAATTGCAAAAATAGTAAAATCGTGAATTTGTCTATCGCGATTTACGACCAACAATTCCAAAAAGCCGAAAAACGGACAAACTTAAAAAATACAAAAGGTGCTTAAACGTAATTTTAATATCAAATTAAGATTACATTATCACCTACCAGCTTCATCTTACAAAGGACAAACTTTTTATATCAGCATACATCCTGGCTTGGACTAATCAAATATTCTTCGGACAAAATAAATACTCAGCTCCAGGAGGATACTTCCGCCGTATAAAAGTTAAAAGCGGACTGACGATGATCAATGTTGCTGCTGCCAGAAAGATCACAATTCTATTTTACAATTTGGAGCATGGTTCTGCCTATATACATGAAGAACCTCAGAAATATGAAGAAAAAATATAACTTACAAATGTAATAAAGTTTTATTAGCGGTATC # Right flank : CCTCAAAAAACAATCTACTGAAAATCAGCAGATTGTTTTTATTTTTAGGATTCAAAATTTAGAATAATTCGAGCTGTTGAAAGGTTGGAGGAGGTTCTTCTTTATTTCTGGCAAAGAATATTTCAATATCTCCAAATTGTTTGTCAGTAATACACATTATGGCAACTTTTCCTGCTTTTGGAAGCATAAACTTTACCCTTTTGATGTGAACTTCCGCATTCTCACGGCTTGGGCAATGCCTGACATACATCGAAAACTGAAATAATGTAAACCCATCATCAATCAAAGCCTTACGGAAGCGGTTAGCATCTTTCATATTTGCTTTGGTTTCGGTCGGAAGATCATATAATACTAAAACCCACATAATCCGGTATGCATTAAACCTTTCGGCATTCATATCAATTCAGGATAAGAGATCAGTCGTTTTTCTCCCGTATAACATTTATAAAGTGATGTGGCTGTTGTTTTTACTGCAACCAATAACGGCCTGGTTTTATCAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: F [matched GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.50,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [76.7-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.37 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //