Array 1 343142-343969 **** Predicted by CRISPRDetect 2.4 *** >NZ_GL698449.1 Streptococcus sp. C150 supercont1.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 343142 36 100.0 30 .................................... TTTGACCTTCTGTAATGTCTTTAGGCTTAT 343208 36 100.0 30 .................................... TGGATAAGAAAATGAAGCTCAAAAAAGCGA 343274 36 100.0 30 .................................... CCACTTCAAACATGGCTAGTCAGCTCAAGA 343340 36 100.0 30 .................................... AAGATTCTTAGACATGTTGTCGAGTCTGTC 343406 36 100.0 30 .................................... TCATCAACACCACTTATGACGAGTTTATGT 343472 36 100.0 30 .................................... AGCAAGAGCGTGCTCAACGTATCAGCGAGT 343538 36 100.0 30 .................................... AGGAAGTAGTACCAACAGGCAAATACTACA 343604 36 100.0 30 .................................... CTCTTTCTGACCTTGACTGTTAAGAATGTC 343670 36 100.0 30 .................................... CAATCCTCTGGGATTGATTCTGGATAGAGT 343736 36 100.0 30 .................................... TCATCAATACGACGTATGATGAGTTCATGT 343802 36 100.0 30 .................................... TGGAGCAAGATGGTGTCAATTATCGAGATT 343868 36 100.0 30 .................................... GTCAACATGCACCAGCTTGGCTATGAGGTA 343934 36 94.4 0 ..................................GT | ========== ====== ====== ====== ==================================== ============================== ================== 13 36 99.6 30 GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC # Left flank : TTGATAGCTTTATCTCAGAGGAATCTTATGATGGTTTTTTTAAGCAAATTGGTCAGCTAGTCAAAAAATATCCAAACCTGACCTTTGTTTTGTTTCCTAGTGACCAAGGCTATTTAAAGATTGATGAGGAAAATAGTAGGTTCGTCAATATTTTATCTGATCAGGTAGAACATCTGTATGATATTGAGTTTATGTATGAAAGGGTAAAGAAACATTATCCAAGTAATAATTTTCCAACGAGAGATGATTTTAGGATGTCCTTGGAGACTGTGACGCCTTATTTATTGGCAAAAATGCTGAGACAACTTAGTCTCTCACTTGTTGATTCAGTAATTTTGAATATCTTAAATCAGTTGTTTCATTTTAATTACCGTATAAGATATTCTCAAACATCTGATGAGGAGCTATTACATAAATTTTTAGAAAATAAGAATTGACAAGGACAGTGATTGATTTTATAATCACTATGTGGGTATAAAAACATCAAAATTTCATTTGAG # Right flank : TTTGATTCAACTTAAAAAGCCAGTTCAACTGAACTTGGCTTTTTAAAATACGCGATAAACATAAGGATTGTCGGGCTGACTGACCTCTTTAACCTCAGTCAGGTTAAGGATAGGAAGGGTCTGTTTGAGATTTTTATAGTAATTCACAGAAATGGTACCTGTGACTGTTACCCAGGCATTATCCTTAAAGGTTTGATTGCTTCCGGTCGTTGCCAATCCGTAAACGCCTGAGTCGGCGATACAGTGGATGATACCGAAACGGAAGATAAACTGATAGCCCTTGGTTTGTGGGTCATTGTAGACAAAGCCTGTATAGTTGACCTTCTTACCTACGAAATCGTCAGGATAGAGGTAGATGAGCTCCATGACTTCCATGTAATTTTCCGTGGTAATGTGGATGGTCTCACGTCCCTTATACTTGGCGAGTTCCTTGGTCATTTCTTTCTCATAAGCTGAGGAGGTGAAGTAGGAACTGGTGTCAGGCTTCAAGTACTGAATGG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: F [matched GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], // Array 2 677079-678694 **** Predicted by CRISPRDetect 2.4 *** >NZ_GL698449.1 Streptococcus sp. C150 supercont1.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 677079 28 100.0 33 ............................ TTGCACTGGCGAAAATTCAATGCTCTATTAGCA 677140 28 100.0 33 ............................ TGAAGCCAACCTTGCGAAAGTTACTAAATCAAA 677201 28 100.0 33 ............................ CGTGACCGAGGAACAAGCTCAAGAGATTTACCA 677262 28 100.0 33 ............................ CGGACTTACCAAAGAGGATTTTAAACGTATGGG 677323 28 100.0 33 ............................ CAATCTATACATTGACGATAGAATTTCACTAGA 677384 28 100.0 33 ............................ CCCACTTTTACAAAAGTATCATCATCAACAGTT 677445 28 100.0 33 ............................ TGCTACAGAACCAAGCACACTCGCAAAGAGCTA 677506 28 100.0 34 ............................ TGGTAAACATACTACCCTCCATCTGAGGAACAAA 677568 28 100.0 33 ............................ CGAAACAAGGTCTACGATATTCAAATAACGAAC 677629 28 100.0 33 ............................ TACGGTCTTGAACCTAACATTCTGATGGTTGAT 677690 28 100.0 33 ............................ TAAGTTGTTTCAAGCTCAGAACCAATACGAGAG 677751 28 100.0 33 ............................ TGAGCTTTTAGTTAAGTCAAGAGAATCTGATTG 677812 28 100.0 33 ............................ CAAACAACTCTTATTGGATAGCTCTGTACGAGC 677873 28 100.0 33 ............................ CGAGGACTTACCAAAGGTCTATGAAGATATGGC 677934 28 100.0 33 ............................ CAATCTCGTTTTTCAAGGTCTTACGATAAAAGC 677995 28 100.0 33 ............................ CGGCATCCTTAGCAAGACAGATATTGAGTTTAG 678056 28 96.4 33 T........................... TACCAGTTTGTGTGTTGGGTTGAATACGTAGTC 678117 28 100.0 33 ............................ CAATCTCGTTTTTCAAGGTCTTACGATAAAAGC 678178 28 100.0 33 ............................ CGGGGAACATTTTGCTCACATACTAGAATATCG 678239 28 100.0 33 ............................ TGGTACTCAATCATAAAGGTTGGATTTATCACG 678300 28 100.0 33 ............................ TGAAACTCTGATACGGTAATCGTCAACGTATGG 678361 28 100.0 33 ............................ CATATCCTTGATTTCCAGATTTACTACGTACTA 678422 28 100.0 33 ............................ CCCAGATAGTGGGCTATTAGAGGAGTATTAAGA 678483 28 100.0 33 ............................ TGTTTCAGATATCTACCGTCAATTATGTAATGA 678544 28 100.0 33 ............................ CACTACTCAATTACAGACATGAGAGAACATAGC 678605 28 100.0 34 ............................ TGGTCGAGGGTTGAATCGCTGGGCAGCTGTCCTT 678667 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================== ================== 27 28 99.9 33 GTTTTTCCCGCACACGCGGGGGTGATCC # Left flank : GAGAAAAAGAATACAATCATTGAGATTGGAGCAGTCAAGTTTAATGGACAACAAGTAGAGGAATTTAATTCTTTGATTAAGTATGAGGAGAAATTACCTACTGCAATTTCTAAATTGACAGGAATTTCTAAATCATTATTAGATCAAGAAGGACGCGATTTAGAAGAAGTACTTTCTGAATTTTTATTGTTTATTGGTAAATTAACTTTAGTTGGCTATAATATCCATTTTGATATTCAGTTTATCAATAATAAACTGAATAAATTTGGTTTACCCATATTAATAAATAAAACTCATGATATAATGAGATACGTCAAGGATGAGAAGTTATTCTTGGATAATTATCAATTGCAGACTGCTCTAAAGGCATATGGGATCGAGGATCAAGTTCCTCATAGAGCTTTGAAAGATGCTAGACTAATCTATCATTTATCAACTAAAGTAAATAAATTCTTAGCTAGGATGAAAGAAAAGTCTTAATTTCATTGGGATCTTTTAGT # Right flank : CTACAAATTTTAGTCAAATGATGATATGACAATATAAATCGATTGGTTGAGGTCTCTTTTTAGATCCGCTAATTAGTTGATTACTTTTTAAGTATTGCCGTTGTAAGCAGCATATCTTATAGGTAGAAATGCTGTCATACCTTGTCATAGACTACTCCTTATTGTTTTAGAACTGTGTTGTTTCTAAAGGTTCCAAAACAAGCGCTTTTTCTTTATATGCACACCAAAAAAGAGCCATTGGCTCTTTTTATTATCGTTTTAATATCCAGGCTCAAAGACTTCAATAATTTGAATAAGGTAGCCTTCATGGAAACCGACTCGGTAATCGACGTTTGGCAGCGTTTTAACCAAATCATTAAGTTCCTTGTCCTTGCTAACGGAATCAGTTAGGACTGGTAGTTCAACAACAAAAAGTTGGGAATGATCCATTTGTAGATAGCTACTATGTATCTTGGTATCAGGACGGAGATGTTTGAGAACAGCTTTGTCTGAGGCCTGAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTCCCGCACACGCGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCCTTCCCGCACACGCGGGGGTGATCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-9.90,-9.80] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [73.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //