Array 1 86934-85123 **** Predicted by CRISPRDetect 2.4 *** >NZ_QTVK01000007.1 Ruminococcus sp. AF34-12 AF34-12.Scaf7, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 86933 32 100.0 36 ................................ TTAATGCCAATATGGTGTATATACCATTTTTTGATA 86865 32 100.0 35 ................................ AAACACGAACTGTTAACAATCTTATCGCGGAGAAG 86798 32 100.0 35 ................................ TAAAGATGTTTTTGCCCGAAATGCACGTCACCCTA 86731 32 100.0 33 ................................ ATATAAAGGATTTAAAAGATTTTAGATACTGTA 86666 32 100.0 32 ................................ TCGCTTTAGCACTTTAGCACTTTACTACGCTA 86602 32 100.0 34 ................................ TTTTGGGATATACATTTCATTGTCAAAAAATTCA 86536 32 100.0 34 ................................ TGTTAATCTCGTTAATACAATTTTTATTATATTC 86470 32 100.0 35 ................................ ATGGATAAGGACTTTTTGAGATATGCAATTGGCAA 86403 32 100.0 34 ................................ CCGCCACCTGCTACATTTAGTACAAAGTTGTAAC 86337 32 100.0 34 ................................ AAAGATATTTACAATTTTTACATCTTCCGAAATG 86271 32 100.0 33 ................................ TGACCGTGACGCGTGTATGGTATGTAATGCTAA 86206 32 100.0 33 ................................ GATTATAAACTTTTACGAACATGGAAGACACCT 86141 32 100.0 33 ................................ TTTATGAAGCTATTTTTGACAAAATAGTTAATT 86076 32 100.0 34 ................................ ATGCTAACTATATGTATGTGGGAATGGTATTAGA 86010 32 100.0 33 ................................ TACAAGTTCTTATCCGTCCGTTATGATTAGAAA 85945 32 100.0 36 ................................ TTTTTCAATTGGATAAGGCGTAAATTTGCTTTACGC 85877 32 100.0 34 ................................ ATTGGCAGGGTAGTGGAACAGGCGAAACGTTTGA 85811 32 100.0 34 ................................ AGACAGCAAGGGTAAAACTGGAAAAGTTAGTAAA 85745 32 100.0 34 ................................ ATTATTTTAGAGCGGAGATAGGTGACAGACGACG 85679 32 100.0 34 ................................ ATGATAAGGAATATGTAAAACCTACTATGACAAA 85613 32 100.0 33 ................................ AAACTTATAGAGTGCTTGCTTTGTGCATTTATC 85548 32 100.0 34 ................................ GCCTTGGAATGTGTCTACTACTACTTTTAATACA 85482 32 100.0 34 ................................ GTGAAATCGATACTAGCAACATTTTCTAGTACCA 85416 32 100.0 34 ................................ TTTTAAATCAAGGTTTTCTGTCTTTGTCTGAATG 85350 32 100.0 34 ................................ TTCACCGCTGACACGTTCACGTTTCATGTTGTAA 85284 32 100.0 33 ................................ TGATTGTTACCCACGATCATAACCCATATATCT 85219 32 96.9 34 ...........T.................... TTATTGTGACTTCAAGTGCGACTATTTGTGACTT 85153 31 90.6 0 ..........................C-..T. | ========== ====== ====== ====== ================================ ==================================== ================== 28 32 99.6 34 GTCACGCTCCACGTGAGCGTGTGAGTTGAAAT # Left flank : GGCGAGCTAGACGAGTACCCGAACTATTTGCTGAAATAGAGGTGATATAAATGATGACCTTAGTAAGCTATGACGTGTCTACCACGGATAATAAGGGCAAAACAAGGCTCAGAAAAGTATCGAAAGAGTGTCAAAATTATGGTCAGCGAGTGCAGAACAGCGTGTTTGAAATAGACGTAGACTATGGCACTTTTCTGAAAGTGAAAGATAAACTTCTGAAAATAATAGACCCAAAGCATGATAGTCTGCGGATATATTACTTAGGAAACAATTGGAAGCATAGAATAGAACACTACGGCATCAAAGAAACCTATGACCCCGAAGGCGTCCTAATATTTTGACCAGCGTACCCCAAGTGATCCACAAATCCCTAGTAAGTTCGCATGAAAATACCATGCTATTTGTGAATGCACAGTGAACAAAATCAAGTCGATACACATTAAATAAAAAAATAAGTCCGCATCACGTTGAGCAAGCACCAGATATACACAACATCAAGG # Right flank : TTCGTTTCAACGCAGGACTTAGGGTGTACGTTATCCGCTCAGATCACAGCAAGTGCTGTGTGGTGTTCAAAGCTTGCAGTAAAAGACGTTTATCCTGAATTTAACTGGAGAAAAGGGGGCTATGTTCATGGCAGAAGAAAATGATATTCTCACGAAGTTAAAAAAAGGCGAAAAAGTTGAGTGTCCTGTTTGCCATAACGGCTACTATGTTCCTGTGAATACAACAGCAGATAAGGCACATTACTTTGTCTGCACTAACAAAGAGTGCAACGGACATTATCGGTGGGAGCCTATAATCGATATTGAATAATACAAATAACCGCTTGACTAAGGTCGGGCGGTATTTTTATACCCAAATACTATACATTTTTCATGTGTTTTCCGTCAAATTCGCCAATTCACACCCCGAAATTTGTGCAAACAAATGATTTATAATTTAATTTGGCAACATTTCTGCAATTGTTGCATTTTTTCTGCAACAAAATACCCACTTTTCGTGT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACGCTCCACGTGAGCGTGTGAGTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCACGCTCCACGTGAGCGTGTGAGTTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.30,-8.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //