Array 1 3212030-3208645 **** Predicted by CRISPRDetect 2.4 *** >NC_011138.3 Alteromonas mediterranea DE, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 3212029 29 100.0 32 ............................. CGCTGGAATCCCGCTTCACTCGCTTCAATCTC 3211968 29 100.0 32 ............................. AATTGCGTGAAAAGTGGCACCAAAACAAATGG 3211907 29 100.0 32 ............................. TGAAAGATCAACTTCAAGGTAAGCCCCCAGGT 3211846 29 100.0 32 ............................. CCTTCCCCCTGCAGTGGCAGCAATAGCATCTG 3211785 29 100.0 32 ............................. AGCTTCTATGTCTCTAGAGATGGCAGGAGGGC 3211724 29 100.0 32 ............................. TAAAGATTGGCACCCAATTTAATGAGCGCCGC 3211663 29 100.0 32 ............................. GCTATGGGGTTGCTTAGTAGGTATGTTGGTAA 3211602 29 100.0 32 ............................. GGTCTCGCAATTTATCGCGCAAAATTAAAGAA 3211541 29 100.0 32 ............................. TTGCGCCACAGGTTGGATTGACCGCTGACGCT 3211480 29 100.0 32 ............................. GCTGGTCTGTTGATGGTACTGAGTTCAAAGTG 3211419 29 100.0 32 ............................. TGTTAGAGGGTGGTTTAAATGAACATTTGCTA 3211358 29 100.0 32 ............................. TTGACCGCCACCGAACCCAACAGTCGCTACGT 3211297 29 100.0 32 ............................. GCTGGATGAATGGCCCCGTTACCATTTACGAA 3211236 29 100.0 32 ............................. CTCAGGAAGTGGACGACCTGCCATACCGACCG 3211175 29 100.0 32 ............................. CAGAAATGCAATGGTTCAACGTAACGCATGCA 3211114 29 100.0 32 ............................. GCCATGACCTTGACGACATTGTTAAAACCAGC 3211053 29 100.0 32 ............................. TCAAAACAGATTGACGGAATGGGCTTCGGCGG 3210992 29 100.0 32 ............................. CTCGTATAAATTAGCTTTAGAATATTCAACAG 3210931 29 100.0 32 ............................. AGATTAAACGAGGTATATTCAATAGTATGCCA 3210870 29 100.0 32 ............................. CGGACCAAATATGGCATTTAACGTACTTTTAA 3210809 29 100.0 32 ............................. CGCAACCAGCAGGAGAACGAACGACTTCTTCA 3210748 29 100.0 32 ............................. CATGAGATACTTGAAGCGTGGTCCAGGCACCG 3210687 29 100.0 32 ............................. TTGAATTGTCAGCAGGGTCAGGCTTGGAAGTT 3210626 29 100.0 32 ............................. CGTAATGCCACTGTTAGTAGTTTCACGCCATT 3210565 29 100.0 32 ............................. CGTTCCGTCACGCCTTATCCTTAAATCACTTA 3210504 29 100.0 32 ............................. GTTTTTAAGTGTTCAATGCTGCCGCGTTCTGG 3210443 29 100.0 32 ............................. TTCATCGAGTACCTTAGCGGTTTTCTTCCAAA 3210382 29 100.0 32 ............................. TTATAAACGCCAGAGCCGTTATAAAGCCGGGC 3210321 29 100.0 32 ............................. CGTCCAATCAACTCAGACCTACGTGAGTCTGG 3210260 29 100.0 32 ............................. GGCTTGAATGGTGGTTGCGACCAATCGTGTGA 3210199 29 100.0 32 ............................. GTTATCTGAAGCCGCTTCTTTTGTCCTAAGTG 3210138 29 100.0 32 ............................. GAAAACTCCAGACACGTAAATGGCAGGACCAG 3210077 29 100.0 32 ............................. CGTCGGGCTCTATTGAGGTGGGTGGTTCAGGA 3210016 29 100.0 32 ............................. ATAATGAACCACTTGAATCATATTTTTCAAGC 3209955 29 100.0 32 ............................. CAACCAGCAGATAGTTTTAGCCAGGTCTATTA 3209894 29 100.0 32 ............................. CCTGGCAACTGAATGGACTTTACAATGTCTTC 3209833 29 100.0 32 ............................. TTTTAGCAAACTCCAGCGCTTCGTAATAGTTA 3209772 29 100.0 32 ............................. GCGCGCCAAAAGAGTTCTGCAGCAGATTTTAG 3209711 29 100.0 32 ............................. TGATCGCCGTTTCATCATCATGGTATTCAAGC 3209650 29 100.0 32 ............................. CGCGAAGTAGAAGGCGAGTTAACCGTTAACAA 3209589 29 100.0 32 ............................. CGAAACCGGCGCAAACCAGTAAGCGCCACACA 3209528 29 100.0 32 ............................. CATCGGGAGATCCTTCGGGGCCTCTCTCTATT 3209467 29 100.0 32 ............................. ATTAGAAACAAGCGGCTCAATTACGTGAATAT 3209406 29 100.0 32 ............................. GGAGGCGTATATTTAAACCATACCAAGACGGT 3209345 29 100.0 32 ............................. TTATTTAGTTGTAGCCAGGCTTTGATAGCTAA 3209284 29 100.0 32 ............................. CGTTATGGAAGGAGTTAGAGGCGTGAAAGGCC 3209223 29 100.0 32 ............................. ATCAATGGATGCCTCAGCGAGTGTACAAAGGG 3209162 29 100.0 32 ............................. TGTTCAGACTACTGGACCATTGAAGATGATGC 3209101 29 100.0 32 ............................. GCAGTGATTAAACGCGAATATCACGTATGTGT 3209040 29 100.0 32 ............................. TAGCATTTCCTCTTGCGGGCCTTTCTTTTTGC 3208979 29 100.0 32 ............................. CGTACAGGTGAGACTCTTCGTGCCATTGAAAG 3208918 29 100.0 32 ............................. CGCAACAGTGTTATGTTGTTACTTCAACCTGA 3208857 29 100.0 33 ............................. GATATGGTTCGCTATAAAAAGGAGCCGAAATCG 3208795 29 100.0 32 ............................. TCAGGCCAGCGTGTAGATGTTGGTGGCGGGTC 3208734 29 100.0 32 ............................. TTTAGAGTTCATCAAAGATTTCCTGATTGAGA 3208673 29 96.6 0 ............................A | ========== ====== ====== ====== ============================= ================================= ================== 56 29 99.9 32 GTGTTCCCCGTGCCCACGGGGATGAACCG # Left flank : TAATTGAAGACGTCTTGAGTGCTGGAGAGATAACTCCTCCTGAGCCCCCTAGGGATAGTCAACCACCGGTTATACCAGAGCCTAAGAATATCGGAAACGAAGGGCACAGAACGGGATAAGTATAATGACAATGTTAACTGTGGTGACAGAAGCTGTGCCCCCTAGATTGAGAGGACGGCTTGCTGTTTGGTTATTAGAAGTTAGAGCTGGTGTATACGTTGGGAATGTTTCAAGGCGAGTTCGCGAAATGATTTGGTATCAGATAACCGAGTTGGCTGATGAAGGAAATGCAGTAATGGCATGGGCAACCAATAATGAATCTGGCTTTGAATTTCAGACTTTCGGTGAAAATAGACGAGAACCTATTGACGTTGATGGACTAAGATTGGTCCGATTTTTACCTATTGATTCTGACCAAAATTCATAATTCTGTTCTTTAAAAAGTTGGTAGAATTTTAACTTTTATTTTTTCTTTTATAGATCAACTGTCTATAATTAGA # Right flank : CCTTCACTGTTCGAAAAAGCACTAAACAAGAGGGTCATATTTTGTCTCTGATTGCGTATAAATATTTGGTATATTCGCACTGCTTTATTCACAAAATGTGGTTGCAGAACTAGTCCTCTGGTGAGATTGGCGACTACAACTCCGAATACTAACGATGCAAAACAATGGGGGAGCTGTTCATCTAATGACCGAATCACAGACAGCCCCCCGATGCCCACTTCCCCTAAACTAAGACTGATTAAACTAACGATGCCAAGAACTTTGTAAAGGGCACGATATCTTGGTTGACGCTGGCAGCTTCCAACGCTTGCATATATTCGTCTCGTCGTTCGACGGGTACAATTGTCCAGGGATAGCCACCCGATGCCATCATTAAATTCATAACAAATCTTCCCATTCTGCCATTGCCATCAAAGTAAGGATGGATGTAGACGAAAATGAAGTGCCCCAGTACCACTCTGACGGCTGAATTTTTCTCCTCTGCGAGCAAGTCGAAGAGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGTGCCCACGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGTGCCCACGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.70,-10.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //