Array 1 145153-143734 **** Predicted by CRISPRDetect 2.4 *** >NZ_WMYF01000003.1 Streptococcus salivarius strain BIOML-A14 scaffold3_size181162, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 145152 36 100.0 30 .................................... AGTGAAGCTGGGTGGAAAGAGAACCCTCGG 145086 36 100.0 30 .................................... GGGATGTCATTCTCTACTACCAGAACAGCT 145020 36 100.0 30 .................................... ATAAAATTGACAGTGAGGGTAACTCAACAA 144954 36 100.0 30 .................................... TTCAAGATTCTCGTGGGATTTGGTCCGATT 144888 36 100.0 30 .................................... AGCACCAAGCACACAGCTATCTTCTGATAT 144822 36 100.0 30 .................................... AGTCGAGAAGCTCAAGAGCGTCTTTAGTTT 144756 36 100.0 30 .................................... CTGACATGCGTGAATTCTTTAAAGAGTATC 144690 36 100.0 30 .................................... TTCAACAAGCATTGCCAGCGATTGGGTATG 144624 36 100.0 30 .................................... ATAGCGTCAACATCGCCATCAAACACTTTA 144558 36 100.0 30 .................................... CAGACAGTGCTGACCCTAAACTTCCTACTC 144492 36 100.0 30 .................................... CAAAGCGTATCAATGTCGTCATTTAGTTGT 144426 36 100.0 30 .................................... AAGCATCTACTCCTTTTAGTCGTCAACACG 144360 36 100.0 30 .................................... TCTTTCAAGATAATAGAGTTTTTAGAAACA 144294 36 100.0 28 .................................... CGAGCGCCTGCGAATGTCACTTGTTTCA 144230 36 100.0 29 .................................... GTATTTGAATACTGTAAATTATCACAGTT 144165 36 100.0 30 .................................... TGCAAGCGGTGGCAAACATCTATTCTACTT 144099 36 100.0 30 .................................... GACACAGCAGTGTTCTTCTTTTACTTTATC 144033 36 100.0 30 .................................... GTGAAGTGTTTGATAACCCTATGTTTGAAG 143967 36 100.0 30 .................................... ACGACCGTACTTTCGAGCGTGCGTGGGTTC 143901 36 100.0 30 .................................... AAATACCGATAAGACAATCGTTTTGCTCAC 143835 36 100.0 30 .................................... GTTTTGGTATGGTTAATGCTTTTCTTTTAG 143769 36 88.9 0 .............................A.C..GG | ========== ====== ====== ====== ==================================== ============================== ================== 22 36 99.5 30 GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC # Left flank : TTGATAGTTTTATTTCAGAGAAATCTTATGATAGTTTTTATAAGCAAATTGGTCAGCTAGTCAAAAAGTATCCAAACCTAACCTTTATTTTGTTTCCGAGTGACCAAGGCTATTTAAAGATTGATGAGGAAAGTAGTAGGTTCGTCAATATTTTATCTGATCAGGTGGAGCATTTGTATGATATTGAGTTTATGTATGAAAGTGTAGCGAAATATTATCCAAGTAATAATTTTCCAACGAGAGAGGATTTTAGGATATCCTTAGAGACCGTAACACCTTATTTATTGACAAAAATGCTGAGACAACCTAGTCTCACACTTGTTGATTCTGTAATTTTGAATATTCTAAATCAGCTGTTTCAATTTAATTACCGTATAAGATATTCACAAACTCCTGATGAGGAGTTATTGCATAGATATTTAGAAAGTAAGAATTGACAAGGACAGTTATTGATTCTATAATCACTATGTGGGTATAAAAACGTCAAAATTTCATTTGAG # Right flank : TTGATTGATTCAACTTAAAAAAGCCAGTTCAACTGAACTTGGCTTTTTAAAATACGCGATAAACATAAGGGTTGTCAGGTTGACCAACCTCTTTGACCTCAGTCAAATTGAGGATAGGCAGGCTCTGTTTGAGATTTTGATAGTAATCCACAGTGATGGTACCAGTGACTTTTACCCAGGTATTATCCTTGAAGGTTTGGTCACTTCCTGTCGTCGCCAGTCCGTAAACACCTGAATCGGCGATACAGTGGATAATCCCAAAACGGAAGATGAACTGATAACCCTTGGTTTGTGGGTCATTGTAAACAAAACCGGTATAGGTGACCTTCTTGCCTACGAAATCGTTAGGATAGAGGTAAATGAGCTCCATGACTTCCATGTAATTTTCTGTGGTAATCTGGATGGTCTCACGTCCCCTGTACTTGGTGAGCTCTCTGGTCATTTCCTTCTCATAAGCTGAGGAGGTGAAGTAGGAGCTGGTGTCTGGCTTTAAGTACTGG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: R [matched GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.20,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //