Array 1 1397516-1395041 **** Predicted by CRISPRDetect 2.4 *** >NC_015600.1 Streptococcus pasteurianus ATCC 43144, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 1397515 36 100.0 31 .................................... CGCCAGCACCAACGACAACGTTGTCTCCTAA 1397448 36 100.0 29 .................................... GGCAACGCAAATTGGAGCTAGGTGCACCA 1397383 36 100.0 30 .................................... TCCTGATGGTGTTGATATTATCTTCAACAC 1397317 36 100.0 30 .................................... GTAGCAAGATTATGTTTGCCGTTTGGTCTC 1397251 36 100.0 31 .................................... CAGCATCTTCAGCGGATAGATTTTCTTCATC 1397184 36 100.0 30 .................................... TTCTACTTTTGAAAAAGTAGCAATAAGAGC 1397118 36 100.0 30 .................................... TAAGACAACACTTGCAGACACTGTGCAAGG 1397052 36 100.0 30 .................................... TAAAACCATTAAAAATGTTGTTACAACTAT 1396986 36 100.0 30 .................................... CTTGTCGCCCGTCGTTAAAAATATTTCCTT 1396920 36 100.0 30 .................................... TTAGCGTGCGTGTATGTGATTTATAGTGTA 1396854 36 100.0 30 .................................... CCACCTCTTATCTCTAGTCATGAAACCCAT 1396788 36 100.0 30 .................................... CTGTTCTGCCATATTCTCACCCCCTTTCTA 1396722 36 100.0 31 .................................... CCAAAAGCGTCAACAATATTCGTCATTCCAG 1396655 36 100.0 30 .................................... GTATTGTCAGACATTTTGATTGTGTTCTTC 1396589 36 100.0 29 .................................... TACAATAGCATCGGCACCCCATCCACCCA 1396524 36 100.0 30 .................................... TTTTTTATCAAAATCAACGAAGATGCAAAG 1396458 36 100.0 31 .................................... CTGACCCATTTCAAGCGATTATTGATAGCTA 1396391 36 100.0 29 .................................... CAATACACCAGAAACTGTTACAAGTGCTT 1396326 36 100.0 30 .................................... AGTAAGCTTACCGTTTGAAATTGCAGTCAA 1396260 36 100.0 30 .................................... TCTCTGGTAATAGTGACGACCTTGAATCAG 1396194 36 100.0 30 .................................... CACCAACAGGCTATGTTATTGACGGTTTCC 1396128 36 100.0 30 .................................... TAGCTGTATACACTTTAGATTGATTGACTG 1396062 36 100.0 30 .................................... TCAAGTAACGAAACATACGCTGTGTGCATT 1395996 36 100.0 30 .................................... TCCTTTTCTATTTTTATGCGCTAAATTCTT 1395930 36 100.0 29 .................................... ATTATCAATCAAAGAAAGGTAAATGAAAT 1395865 36 100.0 30 .................................... GAGCAAGTGGAAAGGCGACCAAGGATTGCC 1395799 36 100.0 29 .................................... ATGGCGAGCACAAGCATACCCAGACCGTA 1395734 36 100.0 30 .................................... CTTTACCAAATTCACCGTCGCCCTCTGTAA 1395668 36 100.0 29 .................................... TAATTGGAAACTAGTTGCATATGCGCGTG 1395603 36 100.0 30 .................................... CAACGTCAAAACCTCTGTGCGCATAACCTA 1395537 36 100.0 30 .................................... ATGCTGACACTACAGCACATTCTAAATCAC 1395471 36 100.0 30 .................................... GATTGAAACGACCATTGACAATTCAGCTAA 1395405 36 100.0 30 .................................... CTATTTTTATGCTCAATATCAATGCCAATC 1395339 36 100.0 30 .................................... ATTACCAATTTTACAATGTTCGTTTAGATT 1395273 36 100.0 29 .................................... CCGTTAGTGTATACTTGTACGGTTCGCGT 1395208 36 100.0 30 .................................... GGACTGTGAGTATAACTTTCTCGGTGCTGA 1395142 36 100.0 30 .................................... CAAAAATATTTGTAGAAAACTATTGACATT 1395076 36 83.3 0 ............................TT.TGT.T | ========== ====== ====== ====== ==================================== =============================== ================== 38 36 99.6 30 GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC # Left flank : GGATGACTATCTTGATTATTCTTCTTTCATAACTATTTGTAAGACTATTACGCAAATGACTGAGAAATTTCCTAATTTTTATTGCACAATTTTCCCGTCAAATGAAAGTTATTTATACGTTACTAAAGAAACAATTGAACATGTTACCATTGTTTCAGACTTTATTGAATCATTGTTTGACTTGGATTTTATGTATGAAAGATTTATTGGTAGATACCCATCAAATAATATTCCAAGTAAAAGTGAGTTTTTGATATTACTTCAGAAAAATGCAAGTTATCTGTTTAGTGATCAGATTTCATATATTAGTTTAGGAATTCCAGATATGGTAGCCATCAAGATTTTAAATAGTTTATACCATTATGATAAGTCTGTTGTATATCCAATACCTAAGATAGAACCGATAGAAATAAGCTTTTTAAAGGACAGAGATTGACTTTTTTGCCTAATCAAACTATAATCGATTTGTAGGATACAAAAACTAAAAATGACGATTTGAG # Right flank : TTATTATTTAAAATCGGTTGAAAGGGATTTTATGACTTCAAAAATTTTCTTTGGTGAGTGGATGAGGATGAAAAAATTGATAGCGCTTTTATCGATTTTACAGGAATCTCTGGTGTTATTGTGAATATGAAAGTACTCCTGATAGCATCAAATTAATTATTTTCACTGTTCAATAAGGTAATGGAGCAGGTTTATACTTATCAATTTCGCCCCATTTTTGAATAGTAAATTTGCTGACAATTATGAGTTAAACGGGTATAACATTAAACAATTGATTCTTGATGCGTATGCCAAAAAAGATATTAAGCACTGAGGGCGCTCAGGATGCTTTTAGACGAAATTATTTTATAATATTTAACCTTTTTACCATCTTATGATGCTTTTTTTCTTGAAATGACTTCTAAAACTTTTATAGCAACGTTTCTGTTTATCTGTTATAATAGAAATAATGATTAATTGTATAGGATTGTAAGATGGATATTCAAGAATTAAAAAAACGA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: R [matched GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.20,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //