Array 1 22947-23094 **** Predicted by CRISPRDetect 2.4 *** >NZ_BAOB01000482.1 Vibrio azureus NBRC 104587, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 22947 28 100.0 32 ............................ AGTGATCGATTGGCACTATCATATGCAGTTTC 23007 28 100.0 32 ............................ ATGACGATGCTGATAATGATAGTCACATTGAA 23067 28 89.3 0 ....................T.....GT | ========== ====== ====== ====== ============================ ================================ ================== 3 28 96.4 32 CTGTACTGCCGCATAGGTAGCTAAGAAA # Left flank : TTCTTTAATGGTAAGTGACGGGCTGTTTGAATTGTCTGGTGTACTAGAAGTTCCTAAAACAGTGCGTGAACTGAGGTTTGTCCGTAACCAAAGTATTGGCAAAAGCTTTCGAGGTTCAAAGCTGCGACGAATGAAACGAAGTATTGCTAGAGCTTCAGCGTTAGGGCATGCATTAAAAATACCTCAGGCAAGAGAAGAGCGATCTATTGAACATTTTCACCGCGTTCCCATTTCTAGTGGTTCATCAGGGCAAACCTATTTTTTATTTACTCAAAAACAAGTGGTTAATGAACGTTCTGAGGCGAACTTTAGTAGTTATGGACTAGCAACTGCACAGGAGAGAAGGGGTACCGTGCCAGACCTAGATTTATAACCCTTTTTTGAAGAGTATTTTAATAATCATAAAATCAATGAGTTATGTTTGAACTAAATAAAAGGGTATTTTGGCGTTTTGTGATGTTATACACACGAAATCATAGAGTTAGATACTACAGTTATCA # Right flank : TATGTTAAAAAACCACTCAGGAATAACACCAGAAAAGACTGCCGAAAAGGTAGTTTATACGATATAAAAACCCTGGGATTTCTTGGGGTTTTATTTTTATAACAATACCTTGTGGCGGTGAGGAATGTAATTCTCTTTAAATCTGCTAGCAAAACAATCCATTAGCTAGAGAGTACAACTGATTGTATTTTAAACCTTAATTGAGAATTCGAGGCATTGTGATATGTATTATAAGGCTTTGGTGCGAACTCAGAGCCGTGTATATACTAATCAACAAGGTAAGGTTTAGTCATACTTTGTCAGCTTAGCTTAGTTAGATAATTTATGCCCAGAGGCTTCACAAGGTAGCACTTCGTAACGCAGAAGTACCCCAAAATGGTTTGGATTTTTACTCATTAATACTCTGTTAATATGCTTTTCCCATATTAAAACTAATTCTTCGTCAGGTGCATCTAAGAATGATTATATGAAATTAGCAAAATGATGATTTGAATGTAAAT # Questionable array : NO Score: 5.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTACTGCCGCATAGGTAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.17%AT] # Reference repeat match prediction: F [matched GTGTACTGCCGCATAGGCAGCTTAGAAA with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.00,-1.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 8360-8938 **** Predicted by CRISPRDetect 2.4 *** >NZ_BAOB01000138.1 Vibrio azureus NBRC 104587, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ =================================== ================== 8360 28 100.0 33 ............................ CTGCGATGGTAAGATAGATGGCAAAGAGGCTTA 8421 28 100.0 33 ............................ TGAGAGAAAGCTCATTTCTGATACTAATGCGTT 8482 28 100.0 33 ............................ TGAGATCGACGGTCAAGAGCTTTTTGCACCCAA 8543 28 100.0 33 ............................ CCTTTTGCTTTTCGTTGTACCCGGCAAGGTCTG 8604 28 100.0 33 ............................ CTTCTGGGACGGCTCATATGGCGAGAAGTTTGA 8665 28 100.0 33 ............................ TGGGTACTTAATCAGAGCCGATCTCGCGGCTAA 8726 28 100.0 33 ............................ CTCTGCATAGCCTAGCTTCGCCAGCAGAGTATC 8787 28 100.0 33 ............................ TGTGTCTGATGCTAAGGTTTATCTGGGCATGGA 8848 28 100.0 35 ............................ CGTTATCCAGATCTATGATTGGAAAGACTTATTTT 8911 28 85.7 0 .........G.A.T............G. | ========== ====== ====== ====== ============================ =================================== ================== 10 28 98.6 33 GTCTTCCCCACGCACGTGGGGGTGTTTC # Left flank : TAAAGAAGAATTAACGATTGATCTTGCATTTTCGCTGACACGAAAAATGGCGGGGCAGTATGATAAATATGTCGTTTCCAATGCATTCAGAGAAAGGGTTATAGAAATGGATATACTCCAGCGTGTTGGTAGGGATATCAGCGAATTTATGGGTATAGAGGAATGTTAGTGGTGATTGCAAATGATTTGCCTCCTGCCGTTCGTGGCCGCATGAAACTTTGGTTTGTAGAAGCAAAGCCGAATGTTTTTGTTTCAGGCCTAAAAGATTCGGTTGCCAATAAGGTTGTAGATTATCTGTTCCAACACTGCCCATCTCAAGCTGGGTTGACGATATTCAAAAGTATAAATAAGCCTCCAGGGTATGAGATAAGGACATTGGGTGAAACCAAGAGGTCACTCATTAACCTCTCAGGCTTGTTTTTGGTTTCTGAAAAGACCGTTAGTTAATCATTAAACACATCATATGGTGTTTTACTTGTGCTCTTTTACAATATGTTGGT # Right flank : CTAAACATCACAACTTGCCAGATTTTAACTTTAAAATATAAAGCAGACGTGATTAACCCTCACGCTCAGCTTTCATTTTCTTAACTACACGCACAACCGTTCTGGCAGAGACGCCAATCATCTTGGCCGTTTCGTTGATGCTCATTTGGTTATCGACTCTTAACTTGTAGATTTTTTCATGCAGTTCTAGGTCAGGTTTCCTCCCTTTGTATTTCCCTTCGTTCATGGCCTTCTCGATGCCTTGCTTTTGGCGGCGGCGTCTATCTTCATAATCTTTTCTAGATATCGCGGCCAACATGTCCATCATCATGTTGTTGATGGCCTTGATCATCGAGTTGGTGAATTCATCAGAAATTTCTGGAGCCAGGGCAATATGACTGGTAGGTAAATCCAGGCTAATGACTTTCAATTCCTTCTTGTACAGCATTTCTTTTAATTTAGACCAACTAGCTTCATTTAAACGTGAAAGGCGGTCTATCTGCTCAATGATGATCACATCT # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACGCACGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTTCCCCACGCACGTGGGGGTGTTTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 2168-2805 **** Predicted by CRISPRDetect 2.4 *** >NZ_BAOB01000075.1 Vibrio azureus NBRC 104587, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 2168 28 100.0 33 ............................ TGGATATATTGAGAAATACACTAGAGCTGACAC 2229 28 100.0 33 ............................ CTGGTGCGGTGGTTCAATTACTCGCAATGAAGG 2290 28 100.0 33 ............................ CTTGATAGCGATTTTATATGCAGCCAAGTCGTT 2351 28 100.0 33 ............................ TGTGCAGTCTGCTGGTAAGGTTTTTGTTAATGA 2412 28 100.0 33 ............................ TTAGCTTTTCAACATCATGCGATGTACTAGGGA 2473 28 100.0 33 ............................ CAAAGACTCTAACCCTATGATCGAATCAATCTC 2534 28 100.0 33 ............................ CGGCCCAATGATCATAAGCGATACGCTTGAAGT 2595 28 100.0 33 ............................ CTGGTCCGAGGGCGAAAATTACGTCGCATATCC 2656 28 100.0 33 ............................ CATTGCTGATATCTGGGAATGGGACGACAAGAA 2717 28 92.9 32 ............C.T............. TGCGTTGTAATTTAATTTTATCAAGTCACGGT 2777 28 82.1 0 AC..........A.T............T | C [2799] ========== ====== ====== ====== ============================ ================================= ================== 11 28 97.7 33 GTCTTCCCCACGTACGTGGGGGTGTTTC # Left flank : TTTGCAGGAGTAACAAATGCTTTAATGTCGTTCATCTATTCTAGCGGACTGGGATTTTTAATTTGGTTCGGCCTTGTCTTTGCATTATTTTTCATTTGCGAAATGATTAAAAGTGCGAGAAGTCGTTCAGAAAGTGGGGAGTTATTGATCGTGAAGAACTTGAAACTCTTAGTTTCTTGGTATTGCTCTATAACGAAGAAGCAACGAAATATCATTTGGATTTCGGCGCTAATTATTTGTGCAATACCAATTGTAGGATGGATGTTTGTTACTCCTTGGCTAATACCGTTGATGTTGTTTTTAGAGTACAAGCGCTCCTAATGAGGCTTTGCTCATAAAAAATAAGAATAAGTGTCGCGCAGTCGACACTTTATCTGGGTGTTGGACAAGCTCGCCCTTTATTAAGTCAATTCAAATCTGTAGGTGTATGTAAAAATAGATTGAAAATGATTAACCACAATATATAGTGTTTTATTGATGCTCATTTTCAATATCTTGGT # Right flank : CTAGAGAGCGAGATGAACCTTCCTTTTCTTGTGCTGTAAAAGTGGCGGAACGGCTTAAGAAAATCTTCAGTAATTTATTTTAAGTTGCGGGGGGCGTTCTGATTAAATAATTATTCAATTAATTCTGAGGTGAAAATAAATTATTAATTTATATAACAATGGCTTATTGGTGTTTTCATGATGTTTGTTAAGTTTATTTAATACGTTTCGCTGTATGTTTTGTAGCAGTGT # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACGTACGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTTCCCCACGCACGTGGGGGTGTTTC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //