Array 1 161552-166919 **** Predicted by CRISPRDetect 2.4 *** >NZ_QJTK01000008.1 Rhodobacter viridis strain JA737 Ga0191652_108, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ========================================== ================== 161552 32 100.0 33 ................................ CTTGCGCTGGACATGGCGTTGCACCTCGCCTTC 161617 32 100.0 35 ................................ CGTTTGGACGCGCCGCACCTCGTCAAGCACCAGAT 161684 32 100.0 35 ................................ CTTGTGGTAGCCATAGCCACCCGCCTTGCCGCAGC 161751 32 100.0 36 ................................ CTCGCTTTCGCCGTCGATGGTGTCTCCCTCGACAGC 161819 32 100.0 33 ................................ ATCTGGGGATCTGGCGCGGTCGAGATGATCGCC 161884 32 100.0 36 ................................ GAACGGCGCCGGATGCCTGCGATGCCGCCGCCGCCC 161952 32 100.0 35 ................................ ATATAGGCCGCGATCGAGATAGCCATCGACGGCCG 162019 32 100.0 34 ................................ TCGGCGGCCAGCGCCTCGATGGCGTCGGCGGCTT 162085 32 100.0 35 ................................ TCGTCGTCTGGCAGGCTCGCCCCGCCGCGCTGCCA 162152 32 100.0 34 ................................ GCCCAGCTCGCGCCACATGTCGGCCACGGTGCGC 162218 32 100.0 37 ................................ ACCAGATGAAACGCGACCTGCCAGCCCACGTCTACAA 162287 32 100.0 34 ................................ TATGAGCTGAGGGCGATGAAGTGATCCGTCAGCC 162353 32 100.0 35 ................................ ATGTCGCCGATCACCTCGACGACGCCTGGCTTGCG 162420 32 100.0 36 ................................ TGTTGCATCGCACCTTTACTGGGTGTAAACATGACC 162488 32 100.0 35 ................................ TCTGGCTCATGGGGTGGGGCCCGGCGTACAGGCCC 162555 32 100.0 34 ................................ CGCAATCTCGCCGCGGCGCAGCTGCTTGTAGCTG 162621 32 100.0 34 ................................ CAGATCGGATCGATCAGCTTGTGCAGCTCTTGGC 162687 32 100.0 33 ................................ CAGTTCTTCGACAGCGAAGAAGATCGCGCCGCC 162752 32 100.0 35 ................................ GTGCAGCACTTCGTAGCGCGCCACGCCCGCAAATA 162819 32 100.0 34 ................................ CTGCCGCCCGCGCCACGGTGACCGCAGCGAACAC 162885 32 100.0 34 ................................ CTCGGTGGCGCAAAGGCGCTTTTCAAACTGATCG 162951 32 100.0 34 ................................ GCCATGCGGCTTTCGATGCGCGCGACCTGCTGCA 163017 32 100.0 36 ................................ GATCTTGGCGACCTCAAGCTCGGATGCCGCGGCGTC 163085 32 100.0 35 ................................ GATCCGCTGGCGCAAATCCGGCGCCGTCTGGGCCG 163152 32 100.0 35 ................................ TTGTAGGTGCAGCTGCGCCGATCCCACGGGTTGAA 163219 32 100.0 34 ................................ GGACGGTGGAACTCAACCGCGCCACCTCGCCCAC 163285 32 100.0 35 ................................ AAGAGCTGGTGCAGCCATCGTATGCGCGTCCTATC 163352 32 100.0 34 ................................ ACCGGAGCGATGCAGGATGCCGTTTCCGCACGCT 163418 32 100.0 34 ................................ CAGCGCCCGTTGAACGCGCGCTCAACCATACAGA 163484 32 100.0 36 ................................ ATCAGCACGAGGTCGAACCCGACGCCGAGCCATCCG 163552 32 100.0 35 ................................ CGATCCGGCCCCGGCGGGGTTGAGCGCAGCGTCAC 163619 32 100.0 34 ................................ TGCCGCTTGGCATGTTCGGCCCGCGCCGCCCGCT 163685 32 100.0 34 ................................ GAAAGGTCAGGCAGACGTTTCGGGGTGACGCGGC 163751 32 100.0 35 ................................ AGCTCGAACGCGTTCAGCGCCGTGCCCGACAGCGC 163818 32 100.0 34 ................................ GGTCACCCCGTAGGTGCCATCCTCCTTGCGGCTG 163884 32 100.0 35 ................................ TCGCACTACCGCGCCGGTCAGACCGTCGCCGCCTT 163951 32 100.0 35 ................................ ATCGCGTCTATCCAAGCCTTTGACGAGGCCATCAA 164018 32 100.0 35 ................................ ATGGGCGGTCAGACGTTCGGCGCTGTCAGCCCGCT 164085 32 100.0 34 ................................ AGACCGCCTTCGGGATGCCGCCGAGGATCGCGTT 164151 32 100.0 34 ................................ TTCACGGTGCCGGGGGCGTAGATTTTCTGCAGGA 164217 32 100.0 34 ................................ CATGTCAGCAAAGTAGCGCCCATCGCTACAATTC 164283 32 100.0 35 ................................ ACGCGGCGGGTCACGTTGACCCGGACCGCCTTATT 164350 32 100.0 35 ................................ CACCATGGCAATCCTCTACGCCTGGCATAAGGCCG 164417 32 100.0 34 ................................ GTTTAATTGGTGCAAGCGCAATTCATGGTTAACG 164483 32 100.0 36 ................................ CTGCCCCTGCAAGCCCAGAGCGTCCCAAGTCTCGGC 164551 32 100.0 34 ................................ CATCAGACGCGATAAATTTGACCGCTGCCACCGG 164617 32 100.0 34 ................................ CCGCCAAAACGGAACGCCTGAACCCGATCACGAT 164683 32 100.0 33 ................................ TCGACCATGACGCGATCCTCCTTGGCGAAGAAG 164748 32 100.0 35 ................................ CTGCGCGACCGGGTTCGAACCGTCGAACCGCCACG 164815 32 100.0 35 ................................ AGTTGTTCCGAGAGGGCGTTGACCGTCTCGGAGAG 164882 32 100.0 34 ................................ TCCGAAAAGTGGGTCAACTCGTCAAACAGGAACA 164948 32 100.0 35 ................................ GGCTACGACATGCCCAACCCATTCGTGCCCGGACT 165015 32 100.0 32 ................................ TCGACCGGCTGCGCGCCAAGCAACGGATAGAG 165079 32 100.0 34 ................................ GGCCCGGCCGGTTTCGGGGTTTTCCGGCCGGGCC 165145 32 100.0 33 ................................ TTCTTCTTCGCCACCGGACCCTCAATGGTGGCG 165210 32 100.0 34 ................................ CGCTAAGGCGTTGAAAAGTAAGAATGCAGATATG 165276 32 100.0 35 ................................ TGGGCGGTGCCGCTGACTGCATCGCTGACCGAGGG 165343 32 100.0 42 ................................ TGTGGTGTCCAGCGGCCCCCACTCACCCCACTGCTTGAAGTG 165417 32 100.0 34 ................................ AAGCAGTGGGGGGAATGGGCAGATCAGACAAACG 165483 32 100.0 36 ................................ GTGCCGTGGACCTGCCCGCTGCCAGCCTATGCCGAG 165551 32 100.0 34 ................................ GGATGGTTAACGTCTGATTCTGCGGCGGCGTGTC 165617 32 100.0 36 ................................ ATGCTTCCGCGTCGTGGCCACCTGCCTCCGACACTC 165685 32 100.0 34 ................................ CGCGGTGGGGGTGTGGCACGGTGGGGCAGGCATG 165751 32 100.0 35 ................................ GGCCACCTGACCGCCGAGCGCGTCACCGTCGAGGA 165818 32 100.0 33 ................................ TGCGGGGGTGAAGTGAAAATTAAACTGCGCGGA 165883 32 100.0 34 ................................ CGCAGCCCTGACCGAGGCGCAGGTCGAGCGTGAC 165949 32 100.0 34 ................................ ACGGCGCTAGTCCGCAGCTACATGCAGAGCGACC 166015 32 100.0 35 ................................ ATGTGCGCGGGGCGGGCATCTGGAGACGCTGTGCA 166082 32 100.0 36 ................................ ATCAGGACGCCCATCGACGCCGAGACATAGACGATG 166150 32 100.0 35 ................................ GCTTTCAAGACTTCGCTGAGCGTGGACGACGCCAA 166217 32 100.0 33 ................................ CGGACACCCTTGCCCGTCTTGGGCGCAAGTTGC 166282 32 100.0 36 ................................ GCCGTGCGCCATTGCGCGGCCAATGCCCTGCGCGGA 166350 32 100.0 36 ................................ GCTGAACACGCCGCGAATAGACCGGGCCGGGCGGGC 166418 32 100.0 34 ................................ CCGAAAGCATCGAATGGGATCACGCGGCGATAGT 166484 32 100.0 36 ................................ TTGTTGAGTGTCACGCAAATTGCGCTTTGACGGCAA 166552 32 100.0 35 ................................ AAGGCCGAACTGTCTGGCAAGTCACGACTGCGCAC 166619 32 100.0 34 ................................ AGCGATGCCGTCGCCCACTCCCCGCCGGACTTGG 166685 32 100.0 35 ................................ AGGTCGGCCCGTCGCCGATTGCGCAGATCGTGGCC 166752 32 100.0 38 ................................ CCGGTGCTGGAAGACCAGATGTGCAGCCTCACGGTGGG 166822 32 100.0 34 ................................ CTTCATCCTCGGCTCGCTGTGACCAGCCCCGCCC 166888 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ========================================== ================== 81 32 100.0 35 GTCGCCCCCTTCGCGGGGGCGTGGATCGAAAC # Left flank : CGACGCCTATCCGCCCTGGTTCTGGAGTTGAGATGCTGGTTCTGGTCACCTATGACGTCAACACGCTCGAAGAGGGCGGCAAGAAACGGTTGCGCCGCGTGGCGAAGGCCTGCGAGGATTTCGGCCAGCGGGTGCAGTTCTCGGTGTTCGAGATCGAGGTCGATCCGGGCCAATGGGTGAAACTCAAGGCGCGGCTGGAGGGGATCATTCGGCCGGAGTTCGACAGTCTGAGGTTCTACTACCTCGGTGCGAACTGGGAACGCAAAGTCGAGCATGTCGGTGCAAAACCCGCGCTGGATCTCAACGGCCCGCTCGTACTCTGATCTGCGAACCACAAGCGTGAAGCGGTTTCCTGCGCGGTTCGCAACTTGGGTGCTCTTTGAAAACGTTAAGAGAAATGTGACCTCAGGCGTCGGCAAGGCGGGAACGCCGGGTTTTCACGAGTCTTTCGCAAGGTGAGTCGGATTTACTCAATCTGCGCAAATGGTTATCGAATGAGA # Right flank : CTTCGCATCCCCGAGCCAGATGAAGGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCGGCCCCTGAGGGGAAAGATTCTTGGCGCAATTCCGCGCCCGGGGTCGAATCGAGCGATGATCGGAACGGTGGTGTAGGTGGGCGCGGACCGGCTGAACGCTTGGTTCGGGACCGCTGCCGCGGGTCGCGGATACCGCGCCCAGCTCTCATAAGGGGCGATGGCAATGATGCTCCTGCGGACCTGACGGCATGCCGGACCGTCTGCGGCGCTCAGGATGTGATGGAGTTGGGGGGCGAGAACCGGCTACGGTCGGTTCGAGACCGGTGTCGCTGGCTGTCGCCGTGCGGATGCCGCCCCCCAGCCCTCATACGGGGCGATGGCGGCGCTGTTCCTGCGGACCGGACGGCGTGTCGGCCTGCCTGCGGGGGACAAAATGGGATGGAGATGAGCGCGACCGGCGTGCGCCTCGAACGCGAGGCCCTGCGGTGGGCGCGAGGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCCTTCGCGGGGGCGTGGATCGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCCCCCTTCGCGGGGGCGTGGATCGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-7.00,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [55.0-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //