Array 1 2386654-2386014 **** Predicted by CRISPRDetect 2.4 *** >NZ_KZ269082.1 Escherichia coli strain 76-1274 aervX-supercont1.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 2386653 29 100.0 32 ............................. CCACCGTTTTCGCCCACCAGGGCGCACAACCC 2386592 29 100.0 32 ............................. GAAAAAGAGAAGGTAGAGAAAGCGGAATCTGG 2386531 29 100.0 32 ............................. CAGGTCTATCGGGCGATCAATAAAATCGGTCA 2386470 29 100.0 32 ............................. GCGCACCGTTGCGTCGAAAAGGCGCTGGAGAT 2386409 29 100.0 32 ............................. TACGCTTACACAACGGGCGAATATTTTAACGG 2386348 29 100.0 32 ............................. GAACCCAATAGTGAAATACAGCATCATTTTTT 2386287 29 100.0 32 ............................. ACCTGGAGGCGAAAAAGGCGCTTCGACGTAAA 2386226 29 100.0 33 ............................. GAGGCCTATATCTCTAACCGCATCGGGCTGCGC 2386164 29 100.0 32 ............................. GGGCAAATATAAATTCCAGCGTGCTTCATGAA 2386103 29 100.0 32 ............................. CTGCGTAGCGACCTTTGCTCTCAATTTCGTTG 2386042 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 11 29 100.0 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTCCTTGCTGCAGGTGAAATTGAACCACCACAACCCGCGCCGGATATGTTACCGCCTGCCATCCCTGAACCTGAAACGCTGGGTGATAGTGGTCACCGGGGGCGCGGCGGATGAGCATGGTCGTGGTTGTTACAGAAAATGTCCCTCCGCGCTTACGTGGACGGCTCGCAATCTGGCTACTGGAAGTGCGTGCCGGTGTGTATGTTGGTGATACATCAAAACGTATTCGGGAGATGATCTGGCAACAAATTACCCAACTGGCTGGTTGCGGAAATGTGGTGATGGCCTGGGCGACCAATACCGAATCGGGTTTTGAATTTCAGACCTGGGGAGAAAACAGACGTATTCCGGTGGATTTGGATGGGTTACGTTTGGTTTCTTTTCTTCCTGTTGATAATCAATAGGTTATGTGTTCTTTAAAAATAAGGAAATGTTTGAATTTAGTTGGTAGATTGTTGATGTGGAATAAATTTGTTTAAAAACAGATATGTATGCTTAGT # Right flank : GGCGCACTGGATGCGATGATGGATATCACTTGGAGTTCCCCCGCCCCTGCGGTAGAACTCCCAGCTCCCATTTTCCAACCCATCAAGACGCCTTCGCCAACTCTTTCACCAGAGGTAGCATTATCCGCATAACGTCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGCTGTTGATTATCAAACCTGACGTCATGCCAGCTATTTCCCGCAGGGAATGCGGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTCCCAAGATTCCAGTTAGTCGCTTCCACCGAAAGTACAGCAATGCCCGCTTTGTCGAATATTTCTGCGTCATTACAACACCCGGTGCCTTTCGGATAGTTTTTATTCAAACCAGGATTGGTCGTCGCGGCTATTCCCTGACTGCGCGCAATTGCCAGTGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCGCTGTTGAAATACAATTTATCGCCAACA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [40.0-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 2403770-2402155 **** Predicted by CRISPRDetect 2.4 *** >NZ_KZ269082.1 Escherichia coli strain 76-1274 aervX-supercont1.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 2403769 29 100.0 32 ............................. GCATTGACGCTTTAAACGACGACGGACGCCAC 2403708 29 100.0 32 ............................. AAAACAGCCTTTAGATTAGTACCTGACGACCG 2403647 29 100.0 32 ............................. TAAACGCACCTGGCGCGCCACTTTATCAACAA 2403586 29 100.0 32 ............................. CGGCTTGTTTAATTGCGTGGAACGTCTCAATT 2403525 29 100.0 32 ............................. ACGGCGTGGATTGAGGGACGGGTATTTGGTCC 2403464 29 96.6 32 ............................T AGATCGCGCCACGAGGAAACGAATATGAACGG 2403403 29 100.0 32 ............................. TGCCGCCAGGCCAGCGACACATCAGACAACTG 2403342 29 100.0 32 ............................. GTCTGTGATGGCCTGCTCGTGAGTCCGCGGCG 2403281 29 100.0 32 ............................. TTTTGATTTCATTAACGGCGCTCCCCATATTT 2403220 29 100.0 32 ............................. TGCGCCGTAGCGTGTCCACCTATTGTAGTAAA 2403159 29 100.0 32 ............................. ATACAAACGCGGTGTTTATCAATATGAATTTT 2403098 29 100.0 32 ............................. GCACCACGCGTACCCCGATGTTTGTTTTGCCA 2403037 29 100.0 32 ............................. ATCCGGCTATATCTTTGAGCATTACAGAAATA 2402976 29 100.0 32 ............................. CTATTGCTTTCGTACAGATTTTCAGTGGTGCT 2402915 29 100.0 32 ............................. AAAATTCTGTGTTTCGACCATTACTTCGGTAA 2402854 29 100.0 32 ............................. ATTCTTGATCACGCTTTTACCGAAGTAATGGT 2402793 29 100.0 32 ............................. GGGGTAGAATTATTCTTCGTGAGCGATTTATC 2402732 29 100.0 32 ............................. CGGCGTTCCGTGCGGCAATTGGAATCACACCA 2402671 29 100.0 32 ............................. CGTTCTGAATCCGATATTCTTCAGCACCTTCA 2402610 29 100.0 32 ............................. AGCGTCAATCAGCGCGTCTATCGCGTCACTTT 2402549 29 100.0 32 ............................. ATTTGGGGGTATGAGAGCGCCGAGCCGTTCGG 2402488 29 100.0 32 ............................. GCTCCCTGTCAGTTGTAATCGATAACGTTGAT 2402427 29 100.0 32 ............................. ATGTAGGGGCAATCGAACGATTCTCTGCCGAC 2402366 29 100.0 32 ............................. CCGAGCCCGATTATCGGCATGAGCGATGCGGA 2402305 29 100.0 32 ............................. TCGAAGAAGAAAGGGAAATAATGCGAGGAACG 2402244 29 100.0 32 ............................. CGCGAGAGCCAGCAAAACGCCAGGGCACAAAA 2402183 29 93.1 0 .A..........................A | ========== ====== ====== ====== ============================= ================================ ================== 27 29 99.6 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TGGATGAACTATTGGCAACGCTGACCGATGATAAACCGCGAGTCATTGCACTGCAGCCGATTAGCCAAAAGGATGATGCCACACGTTTGTGCATTGAAACCTGCATTGCGCGTAATTGGCGTTTGTCGATGCAAACACATAAATATCTAAATATTGCCTGATTAAACATTTATAAGCGTTATAAATGGGTGGAACCTGTAAAGACTTCTACTCATTTATATTGTTTGTCGCCTCTGAAAACTCCTCCATTTTACCCATCCAGGGCTAATCATTAGCATTCTCTACAAATTCTGTGGCATTAATTTTTCGCTGGAGTGAAAATTATTGCGGTAAAGTTTGGTAGATTTTAGTTTGTATAGAGTTATTTTAAATATTTACCTTTTTAATCAATGGATTAAGTACTCTTTAACATAATGGATGTGTTGTTTGTGTGATACTATAAAGTTGGTAGATTGTGACTGGCTTAAAAAATCATTAATTAATAATAGGTTATGTTTAGA # Right flank : CCATATAACCCGTTATCTCTTTCTCAAGTTTTTATATTAGCAGTACTTGTAATAAGCAACATATCCACGTAACCCCTCATGTTCAAAATAGTTCTCCATGCCAGAGAAGTTCACAATTATCGATACAAAAAATTAAATTTAATCAAAGTGTTATTTGTATGATTCTTAAATCGTTAAGAAATTTTAATCTATTATTTTTTTAATGTTGAATTAATATCTATTAATTTTTTCTTTAGGTTAATAGTTTGTTTTTTAAGCTTGTTATTCATTGATTAAGTAATAAATCTGAAAATTTGTCTTTGTTTTGAGGCTAATGAGTGGTTTTACATTACCGTTTCTATACGCTGTTGATGAATAGTTCTTATGAATAAAGATATCCAGTTCATACTTTAAGTGAAAATTGATAAAGTGCGATTCGTATTGTCTTTTATTCTAAAGACATCGAGTGTAGTTAATATTCCTTGTAAAAACAGGGATAAACCGAACTAGTTAAAGTTTTT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //