Array 1 15796-15615 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEWJ010000002.1 Synechocystis sp. LEGE 06083 NODE_19_length_39712_cov_5.023316, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =================================== ================== 15795 37 94.6 35 TA................................... AATTCGGAAATACCTTCACCCATAACACTAAATAA 15723 37 100.0 35 ..................................... GATTGAAATGAAAACTGACAAGGGCAAGCTCAACC 15651 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== =================================== ================== 3 37 98.2 36 CTTTCCTTTAACTAATCCCGGAGATCGGGACTGAAAC # Left flank : AAACGGCACTCCGTAACTTCTCCAATATGCTCGCCACTGGCAGTTTCAGTTGCTTTTTGACACGCTTAAGTAGATTCGCAATGGCTCCCTCCGATATTTTTAGTCCATACATCTCCTCCATTAACCGACTCAGTCTTTCATAGCTGATGCCCTGGCTATAGCGCAGATAGCTGACCATTATTGCCACACTATCTCCAAAGGGAGACCCTGGTTCTAGTCCTACTGGTACTGCTGCTTCATAACTTTGCTGACAGCACTTACATTTGCCTCCATGACGTTCCACCCTGGTCACTATTACCTTGACTGCCGGCAGTTCTATCCTTTCGTATATCCCTATTAGTTTTTGCCCTTCTGGGCCTACCTCCATTCCACAATGGGGGCAAGCTGTCGCATGAGCTACCACTATCTGGTCTGGATTGGGGTTTAGTTCTCGTCCTCCCTGTTGGTGATTCCTTTCTCGTTTTTTCGCAGTCTTTTCCTCTTTGCTCTGATTGGCTTTG # Right flank : TTTTTATGTCCAATACTTTAACAATCATCAGTTGATGTTATGAGCCGCAATTGGGATAATTTATCAACCTCAAGCCAAAGAGGTTAGAGCAAAAAGACCAATTGCCGGACAACTTAAAACGGCGTCCAGCCCGCGGCAGAAATACGAAGAGACCTAAACAAGGATGGAGACGACATTAGCCGTGACATTAGATACTGATTTTACCGAAGAGCATCCAAAAAAACTTGCAATCATTCCGGTTAGGGATGATAGCATTTGATGAAAGACAGTTTTTGTTATTCGTAATGGCTAGAGTCAGAAAGCTCGTCAAGCTAAATGTCTTCAGTTCGCCGACCAAGATCTAAGTTTTTTAAAGAACTTCAACAGATCTTAAGGAATACTGGCAAGCGAATACACCGACCGCAAACTTTTAGAGGATTTATTAAATGAACGAGCGGCTTAATGCGCCGCTGATCGCCACACAAACACCTAAAACCAAGAAAACCCCTGATGCTTTGGCC # Questionable array : NO Score: 5.27 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTCCTTTAACTAATCCCGGAGATCGGGACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.05%AT] # Reference repeat match prediction: R [matched CTTTCCTTCTACTAATCCCGGCGATCGGGACTGAAAC with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.50,-7.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [1.05,4.5 Confidence: MEDIUM] # Array family : I-D [Matched known repeat from this family], //