Array 1 3309-4199 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_BCXB01000048.1 Rhodococcus marinonascens NBRC 14363, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                           	Insertion/Deletion
==========	======	======	======	============================	==========================================	==================
      3309	    28	 100.0	    33	............................	TCGGTTGTACCGGCTACTCGATGGGAAATGGAT         	
      3370	    28	 100.0	    33	............................	GTCTAGGGGATCAGATTTGCGACACGTTCTCGT         	
      3431	    28	  96.4	    33	.................A..........	CGCTGCCGAGTAGAAGAAACTCGACACGTCGAA         	
      3492	    28	  96.4	    33	....G.......................	CTACGACGTCAACATGATTTTGCGCAACGTTCC         	
      3553	    28	  96.4	    33	............T...............	GGTCCTGATCTGAACCAGAATTCGAAGTTCGGT         	
      3614	    28	 100.0	    33	............................	CTTCTGGGACCGCTCCGCACGCAAGTGGCCGTC         	
      3675	    28	 100.0	    33	............................	GTCGTCGATGAAGCGTTGAAATACTTCGACGGC         	
      3736	    28	 100.0	    33	............................	TACGAGGTGCTTGACCCCCGACGCGGCGTTGTT         	
      3797	    28	 100.0	    33	............................	CCTGTCTTACGTAGGGACGTCGGTCAGCGGCAG         	
      3858	    28	 100.0	    33	............................	GACCCAGAGGCGGAAATTCTCGCCTGCCCCGAA         	
      3919	    28	  96.4	    33	........T...................	GTGCCCACTGACACTCTCGAACGGTCGAATCCG         	
      3980	    28	 100.0	    33	............................	GGACTATCTTCGCTATCTCGACCAACTCCGGCA         	
      4041	    28	  92.9	    33	.............CT.............	GCACCGCAAGCATTCCCAGGTCGCGAGGATTGC         	
      4102	    28	  89.3	    42	..A....................T.T..	GCGAAGCGTGTCTCGGTGACGATCGCCGACGGGCTGTTCTGT	
      4172	    28	  85.7	     0	AC.T.......................A	|                                         	
==========	======	======	======	============================	==========================================	==================
        15	    28	  96.9	    34	CTGCACCCCGCACACGCGGGGATCACCC	                                          	       

# Left flank :   CCGGGACCGGTGCCCCGCCAATTTTTTTCGCCTTCTGGCAAAGGAGAATCGGATCGGTATGAGGGGGCCGGAGTGCAACTTGGGATCGGAGCAGTTTTCCCAGCGAGCGCAGCGAGTACGGGGTGGGGAAAGTGGTTCGACCCGAAGGGCGGAGCGCAGCGTAGTCACGGGTTGCGCGCAGGTCACCGCCGATCAGAATCGGAAGGCCAGAAGGAGAAACAAATCAATGCTCTTTGCCGGGCGGAGCGCAGCGGAGCACTATTCGGAGAACACCGCAGGTGGTCGGCCGCCGGCAGGCGCAACCCGAACCGCGACCATCTCCCACCACCGTCAACGACCCCCACACAGGCAGGCGTGGCAAAATCGGGGTGTGGCTCGCCACACAGATCATTGACACCTCAACAGCACACTCGACTCGACCAGTTCCTCCCCTCCCAGTTCAACACCCAGAACTGAACGAGAAACAGCAATCCGCGACACATCACTCCAGGTCAACAAGC
# Right flank :  ACACCGGCCACGGATCACGTGGTGGCTCGTGTTTGCGCGGACTCTCCGTGGAGGGGTGTGTTCGTGGAATACGATGGTGGGATGCTGATCGGGTATGCACGATGTTCGTCGTCCGCGGGCGACGAGAAGAGTCAGCGGGATCAATTGGTGGCGCGGGGTGTCGGCGCCGACGCTATTCATGTCGATCATGGGCTGACCGGCCGCGACCGGACGCGACCGGCTCTGACTGCCGTCTTGTCGGCGTTGTCGGCGCGGGACACGTTGGTGGTCACCACCCTTGATCGGTTGGCCCGCTCGGCCGCTGACCTGGGTGCGATCACCACCGATCTGCGGGATCGCGATGTGCGGTTGATGGTCGGGGGCACCGTGCACGATCCGCGGGATCCGATCGGGCGGGAAGTGTTCGCGATGTTGTCGACGACGTTCGCCGAGTTCGAGTCCGGGCTGATTCGTCTGCGGACGATGGAGGGCAATGCCCGTCGCCGCGCGGCCGGCGGTTT

# Questionable array : NO	 Score: 3.03
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.92,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     CTGCACCCCGCACACGCGGGGATCACCC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [5,2] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-12.70,-12.10] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [3-10] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [48.3-33.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [1.42,0   Confidence: HIGH] 

# Array family : NA
//