Array 1 624784-626595 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR594044.1 Streptococcus lutetiensis strain NCTC8796 chromosome 1 Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 624784 36 100.0 30 .................................... TGACTTGTTATAAATTTGAACACCCGTTGG 624850 36 100.0 30 .................................... AGAAGTATTTTGTATCGACTGCTATGAGTG 624916 36 100.0 30 .................................... TCAAAGGGATTGTTAATATTGCTGGTGACC 624982 36 100.0 31 .................................... AGATGACTCTTTCCAACGCCTGGACGACCTT 625049 36 100.0 30 .................................... CTTCGACTTGGATAGCGGCAATATCACATT 625115 36 100.0 30 .................................... TAACGCTAGATGAATTAAGTAAAGAGCTAA 625181 36 100.0 30 .................................... ATAATCACGTCAAAAGCAGCCCAAATCGCT 625247 36 100.0 30 .................................... TGAAAGTGGCATGTTAGATGATTATTAGAG 625313 36 100.0 30 .................................... CGACTTCGGTGGACCGAAGAACGCAATCGG 625379 36 100.0 30 .................................... CAAAACAGTTTAGAGATGACGTTAAAACGG 625445 36 100.0 30 .................................... GAGTTTCAAACAATATGGCTAATAAACTGA 625511 36 100.0 30 .................................... CTAGCGTGTTTGTTCCTGTACCTGAAAAGA 625577 36 100.0 30 .................................... AATAAGGCCTTGTGGATGGCTTGTAATCGT 625643 36 100.0 29 .................................... TTATTCCGGCAGGGGAGATAGAACCTATT 625708 36 100.0 29 .................................... TTATTCCGGCAGGGGAGATAGAACCTATT 625773 36 100.0 30 .................................... GTACAAGTGAGCGACAAGTTCGAATGTATA 625839 36 100.0 30 .................................... CATTGCTGTCACGGAGCTGACAATAATTGT 625905 36 100.0 30 .................................... TTCGGTTATCAGCGAGCCGTACAAAGAGTT 625971 36 100.0 29 .................................... CCGATGAAACAACCATTATTTTTAAACCA 626036 36 100.0 29 .................................... ACATTGATATAACAACCTTTCTAAGCATT 626101 36 100.0 30 .................................... GGGGGCAAGGATTTGTAAGAGTGAATAGCT 626167 36 100.0 29 .................................... TAATACTGCAAGCTAAACCATACAGGCCT 626232 36 97.2 30 ......A............................. CTGGTATAGCTCAATACGCTGAATTCTTTT 626298 36 100.0 30 .................................... ATAACTATCGCAGCAAACAAGAACGCTTGT 626364 36 100.0 30 .................................... AGTCGTCTTCTTCACGATTGAGCTAGGAAT 626430 36 100.0 30 .................................... CTTAGATTTGTCACATGCAGGCTTGCAAGA 626496 36 100.0 30 .................................... AAAAAATTAAAAACAAAATAGAAAGAGGAC 626562 34 83.3 0 ......................--C...ACC..... | ========== ====== ====== ====== ==================================== =============================== ================== 28 36 99.3 30 GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC # Left flank : ATGGATGATTACCTTGATTATGCCTCATTTATAAGAATTTGTCAGGTTATCACAAGAATGGCTGATGAGTTTCCAAATTTTTATTGTACGATTTTTCCGTCAAACGAAAGCTACTTGTATGTGACTAAAGAAACAATAGAAAATATTACCATTGTTTCAGATTATATTGAATCTTTGTTTGATCTTGATTTTATGTATGAAAGGTTTGTTGGAAGATATCCATCCAACAATGTACCAACAAAAAAAGAATTTTTAATTCTTTTACAGAAGAATGCAAGTTATTTATTTAGTGAGCAAATTTCATATGTGAGTTTAGGAATTTCGGATATGGTAGCTATCAAGATACTAAATAGTTTATATCACTATGATAAGTCAGTTAAATATCCAATTTCAGAGATAAATCAGCTTGAAATAAGCTTTCTTAAGGATAAAGATTGACTTTTAGGCTCAATGAAATTATAATTCTTGTAGAGTATAAAGACCCAAAATGACGATTTGAG # Right flank : CCCCACCTAGTTCGTCACTGGGTGGGGTAATCTATGTGGGTCATAGGTTTGCAGAATTGAGTTTTTATTACCTTTGATTAATAATAACGCTTTCTGCAAAAATTGTAAAATGATTTGCGGTAGCTGATTTTAGCGATATTTATCGTGCCTAGAAAACTTTTTATAGCACCAGTGGTGTTTATTTGTTATAATAGAAATAATGAATAATTGTATAGGATTATAGATAGATGGATATTCAAGAATTAAAAAAACGACAAGAAAAGATTCGCAATTTCTCAATTATTGCGCATATTGACCACGGAAAGTCAACTTTGGCTGACCGTATTTTGGAAAAAACTGAAACTGTCTCTAGTCGTGAAATGCAAGCTCAACTCTTGGATAGTATGGATTTGGAACGTGAACGTGGTATCACAATCAAATTGAATGCGATTGAGTTGAATTACACAGCTAAAGATGGTGAAACTTACATTTTCCACTTGATTGACACACCAGGGCACGTT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: F [matched GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //