Array 1 1576325-1576595 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT992502.1 Enterobacter bugandensis isolate EB-247 chromosome I Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1576325 28 100.0 32 ............................ GCCGGAACAACACCCACGCGCGATCCACAGCC 1576385 28 100.0 32 ............................ AAGACTCTCCATCGCTTGCTGTATTTTTGGGT 1576445 28 100.0 33 ............................ TCCACGATATACGTAAGGGTATTGAACATAAGA 1576506 28 100.0 33 ............................ ACGACGGCCAGGAGAGAAAGTGCAATTCCTGCA 1576567 28 89.3 0 .....................A.GC... | C [1576593] ========== ====== ====== ====== ============================ ================================= ================== 5 28 97.9 33 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : TTCACGGTTTGCATAAGCTGTTTGGTGGCGTGGGCTTTATCAGCGGCATGCTGGTAGAGAAAGGGCTACCGGGATTTATTGCCTACGGCGTGTTGATTGGCGAAGTGGTGGCACCGATCCTGATTATTGTCGGGCTCTTTACGCGCCCGGCCGCGCTGGTGCTGGCGTTTACGATGATCGTGGCATGGCTGATGGTGGGAATGGGTGAAACGTTCGCGCTCGATAAGGTTGGGGCATGGGCGATTGAAAGTCTGGTGTACTTCTTTGTTGGCTCGCTGGCGGTGGCGTGTTTAGGGGCAGGGCGGTTTGCGTTAGGGAAAGCGCCTGCGTGGCAATAAAGCTGGGTGCTAAAAATATAAGGGTCTCTGGACCCTTTTTTATTGGTGGTTTTTAAGTGTTTGATTTTATTAAGCGGAATTATTTGTGATGAAAAAAGGGTTTAAAGGGTATTTTTTAGGGGAATTCTTTATCTGACAAGGTGATAGGTGTAGATTGTTCCA # Right flank : ACGTAGGCCGGGTAAACGCAGTGCCACCCGGCAAAAAAGCCCGGTGGCGCTGACGCTTACCGGGCCTACGAACGAACGTTTATTGCTTATGCGAGGACCAGATCCCCCTGCGGGTGGCACGAGCACGCCAGCACGTAACCCTCGGCAATTTCCGCGTCGGACAGCGTCATGGTGCTGGTGACGGTATATTCCCCGGAAACCACTTTCGTTTTACAGCAGCCGCACACGCCCGCACGGCAGGCCGCGACTACCGGCACCTTGTTGCTTTCCAGCGCTTCCAGCAGCGTGGTGCCCACGCGGCCAAAGAAGGTCTGTGCGGGCTGCAGTTTGGTGAACTGAATCCCGCTGGTTGCCGCTTCCGCCACCGGCGTGAAGAACTGCTCTTTGAAGAAGCGGGTCACGCCAAGCGCTCTAACTTCTTTCTCCACGATATCCATGTACGGCGCCGGGCCGCAGGTCATCACGGTACGGTTCGCAATGTCCGGCACGCTTTGCAGCAG # Questionable array : NO Score: 5.96 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 1593329-1593838 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT992502.1 Enterobacter bugandensis isolate EB-247 chromosome I Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1593329 28 100.0 32 ............................ GCATTGAATTCACGCCCACCAGCCCCGGCGTT 1593389 28 100.0 32 ............................ GAAAGCAGCAGCAGCATCGGTATCTGGATCAC 1593449 28 100.0 32 ............................ ATTGCGTTTACGGCGGTATCAGACAGGCCGAA 1593509 28 96.4 33 ............T............... AGTGCGTAAGCCTGTTGCTCTGTAATGCCGAAT 1593570 28 100.0 32 ............................ AGATTGAGCCAGATAGCGACCATCCTAAGTGT 1593630 28 100.0 32 ............................ AGATTGAGCCAGATAGCGACCATCCTAAGTGT 1593690 28 100.0 32 ............................ GCCTCCTGCGTCGCCGCCTGACTGATACCAAT 1593750 28 100.0 33 ............................ GCTGAGATTGCCAGCAGTTTTGGAAGTGTTCGC 1593811 28 96.4 0 .......................T.... | ========== ====== ====== ====== ============================ ================================= ================== 9 28 99.2 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CTCCCGCAAACGCAGCCCGTATGCCGTTGCCTCGGGGCATATCTGGAAGAGGTTAAAACCGGCCTCACGGAATCCATGCGTGATTTTCAGATAGTGGAATTTGAGGACGAGGCGGAACAACCGCGACAAAAAGAGTGGCTGCTGGAAGATACCGAAACGAAATGTGACTACTGCCGGGCGTTGAATCATGTGCTGCTGGTGTCGCATTTTGACCGCGACATGCTGCCGCATCTTACAGGACTGCTCCATGACATCACGCATTCTATGGCCGCAGATGTCGTTGCGCCTCAACGTGCAGAAACGGTAGTTCACATTATTTCCTGAATGTAGTTTGTGACGTCCGGGGTAGGCTCCTGAGGCCACTGGCTAGACCCTTTTTTTTGATGATAATGTAAAGTATTGATTTATATGATGCGAATTTACGTACCAGAAAAAAGGGTTTTATGCGGGAAAGTTGATTATTTTCTTTTCTAACAATAAGATGGCGGGGTTTCCTTTCA # Right flank : AGCCCCTCTGGGCTTTAATGCCGTGGAAATGGCGTTACTGTCCCACAGACAGTACAAGTAAACCCATCCCTCACAAATATTCACCTCGTCTATTTAAAAACGAAATACCATCATCCACACGCTTTCCATTTGCAGATTAAATAAAAATCCCATTCAGGGGTTAATTATATTTCCGTGTATATATTATTTGTAAAAATAATACTTTTAAAAAATAATGTGTTTTTGTTTAGTTATCACAGAAATTTCCATTCATTTGATATATATCACATTTGTATTTCTCTCATCTCCGATAACATACCCGCATTCAATATCTTGAAATAAAAGCCGTTGCTATGCCTGCAAACAGCGTTACCCCAACAGATTTAAAAACCATCCTGCATTCTAAACGCGCCAACATTTATTACCTGGAGAAATGCCGCATCCAGGTGAATGGTGGGCGTGTTGAATATGTCACCCAGGAAGGAAAAGAGTCTTTTTACTGGAATATTCCCATCGCGAAT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //