Array 1 32413-34102 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB851123.1 [Clostridium] clostridioforme 90A1 acBSi-supercont1.5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ======================================================================== ================== 32413 33 100.0 34 ................................. AACAAGGCCCTGGCGGAAACGCCAACGACCTACC 32480 33 100.0 33 ................................. TTAACAATGTACTACTTCCAATTTCAAAATGGG 32546 33 100.0 37 ................................. TAATATTGCTATTGTGTAATTCTCAAAAAAATGCTAT 32616 33 100.0 35 ................................. GGACCAGCGCATCCATCTCAGGGTATCCTCTCCTC 32684 33 100.0 33 ................................. CCCCTCCATGGTCAGGGCTTCCAGGCGGATGTC 32750 33 100.0 34 ................................. TGGAGAAACAGTCGGAGTATATCTCCTGCGAGGG 32817 33 100.0 34 ................................. CTACAGGAACGCAGGAGCCGGCCATCCAGGAGGG 32884 33 100.0 34 ................................. ACTGCAACACTATCACAATGCCAAACTCCGACCA 32951 33 100.0 34 ................................. CGTATACTCAGACGGTCAGTGTACCGGGAGCAAA 33018 33 100.0 35 ................................. TGCAAAGGATGGAAAAATGCAAGAGGTTGCCGGAT 33086 33 100.0 33 ................................. CTAAAAATAGGTATAAAAAATACAGCTCCGCAA 33152 33 100.0 34 ................................. ACACTCATGTCGAAAATCAACATCCTGATAGTCT 33219 33 100.0 35 ................................. TGTGTTAGAAGATGCGAAAGTCTATGTTGGTTGGG 33287 33 100.0 35 ................................. TGTCCGGTAGACTTATATATATACTGCATGGGACT 33355 33 100.0 37 ................................. AAAGTTGGCCTGTATCTCAATCATAAATCGCTCCTGG 33425 33 100.0 34 ................................. TCCGTGATATTCGCAACCTCACTGGAATCCGGGG 33492 33 100.0 34 ................................. CTCGCTCCCAGGCTTAGCCTCGTAGCTGTACACC 33559 33 100.0 34 ................................. ATAGCCTGTGCCACCTTCCACCAGGGAAGGCCGT 33626 33 100.0 35 ................................. ACAATATGCAAACAAGGTAACGTTTTTTGATACCC 33694 33 100.0 35 ................................. CTGTTCTCATGGTTCTTTCCTTTCCGATTCTTGTT 33762 33 100.0 36 ................................. TGCCAAACTGACCAATTACCGGATTGAGCAGCTAGA 33831 33 100.0 34 ................................. TTTTTTAGTCCCTGGTGAGGAGCCCGGCTGGAAA 33898 33 100.0 72 ................................. ATCCCTCATTGCCTGGAACGCGTCTCTCGCCGTAGTCGAGGCCCGCGAGGGCCTTGTGGATTGAAATATNNN 34003 33 78.8 34 NNNNNNN.......................... ATCCCTCATTGCCTGGAACGCGTCTCTCGCCGTA 34070 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ======================================================================== ================== 25 33 99.2 36 GTCGAGGCCCGCGAGGGCCTTGTGGATTGAAAT # Left flank : TGGAATTTCCGGAGAAATGTGGATTTCTGGCAGTGGCCGGAACAGCGGTGGCCCTGAAAGCGGGAAATCTGGCAGCTGTAATGGAACGCCAGGGCAGGGTATTGCGCATTTACGATGTCAATGATAAGAAGGAAGTGATGGCGGAATTTGTCCGTGCGTTCAAGCAGGGAGCTATATATCCGGAACAAAAGAGGCTTGTTTTGAAAGAGTATCCGGCGGAGGCGGCAGAGGCACTGCAGCATGCGGGATATATGCGTGAAATGAAGGATTATGTAGTGTATAAGTAGAGTGTGATTTCTGTGAGGCGGAATCCCATCAAACCAGGTGCGAATGCCAAGCTAACATGAAATGTCCGGGAGATTCGCACCTGAAAAACAGAGGAAAAGCCGTGAAAATAGGCTGGGTGAATGGATGGAGGAGGTTGAAATAAGGAGGGGGGGGGGGGGACATAATGCATAAAAAGTTAGGGGGATGTGGAGGGATTGTTGGATAGTTTTGCT # Right flank : TATAACATGCTTTATATACATATGCTTTTCCTTTCCACCACTGCTGGATATGTGGTTTATTTTAGCTGGCCGATTTCGTGATAGGCCTCCAGAATACCATTTTTGGCTGCTTTTTATACAGTATCAATATCAACCCAATACCAACACTAACCCAATACCACCCCAATACTAACACCAATTCTTAATCATGCAGAACCATTAGGCAATTGCGAAACTCACTGACCAGAATTTATGCACATCGTATAGGAATGAATCTAAATTGAATATATTAAGCAAGATATTTTGTGCAAGGTGAATATAAAAATTCAGAGTTTCGCAATTACCTAATGCAGAACCATTTCTGAAAGGAGAGGGAAAAGCCATGAAACAGATGTCATTATTCGATGACAGAGAAGTATACAATCCCCTGGCCAGCAGGCTGCGTCCGGATGACCTGGATGGATTTGTGGGACAGGAGCATCTTTTGGGAAAGGGGAAGCTGCTGCGCCAGCTCATAGAGC # Questionable array : NO Score: 9.12 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:-0.09, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAGGCCCGCGAGGGCCTTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGAGGCCCGCGAGGGCCTTGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.00,-10.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 984211-982652 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB851120.1 [Clostridium] clostridioforme 90A1 acBSi-supercont1.2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 984210 32 100.0 34 ................................ ATCAATCAACGAGTTTCACCTCCGCCCCGTCCAG 984144 32 100.0 34 ................................ AACAGATATGAAAGAGGACTTCGTGGAACCTCTC 984078 32 100.0 34 ................................ TTCAAAATCGCCAGTCCATTTACCCCTATGGAAA 984012 32 100.0 33 ................................ TCCGCCTCTGCTATAAAACCTATCTTGTCAGGT 983947 32 100.0 34 ................................ ATACGGTATCTCTCCGCTCTCGCACATCTCATGG 983881 32 100.0 36 ................................ CACCTGGGCCGGGGCCATGGATGCAAGGTCCAGGAG 983813 32 100.0 34 ................................ CGTCAAGTATGTCGGATGTGGGAAAACAGGCTAT 983747 32 100.0 35 ................................ CCCCAGGCGGGTACCGCAATGGTATCCAGTCATGA 983680 32 100.0 34 ................................ ACCCGAGATGTCCAGAAGGTTACTTTCCAGCCTT 983614 32 100.0 35 ................................ ACAAACCTTAAGGTCACTGCTTACAACGCTTATGC 983547 32 100.0 33 ................................ CCTACAAGGAGCGCATTATATACTCTTGCTTGA 983482 32 100.0 34 ................................ TGTACTGAATAAGAGTAATACCCCCGCTTGCCAC 983416 32 100.0 34 ................................ CTCGAACCGAAACGCCTTTAATGTCGCCGTCCCC 983350 32 100.0 35 ................................ TCCACAATCTTGACAATAGTCTTGCCCCATCTCAA 983283 32 100.0 33 ................................ TTGTGCAGTATTTCAATGCGGTGTTTCTGGTAA 983218 32 100.0 35 ................................ GCTATTATCTTTTTTACCTCACTTTCGCTGATTTC 983151 32 100.0 37 ................................ CCTTCCTGGCCGTCCTGCCCTTCCTTGCCTGCCTGCT 983082 32 100.0 35 ................................ ATCATGCCGTTCGTGATTCCCACGCCCGCCGCCGT 983015 32 100.0 34 ................................ CCTCACGTGCCCGTCCCCGGCCGTCTGGTACTGC 982949 32 100.0 34 ................................ ATCCATTAACTGAGCCGCAAGCTCACCCGTCTGC 982883 32 100.0 34 ................................ AGACCAGCAGACGGCCGATTTTATCAATTGTGTC 982817 32 100.0 36 ................................ ATGGACATGTACCGGCTGGCCGTTGACTGGCTTATG 982749 32 100.0 34 ................................ CGCAATCCGCAGTGCACCTCTGGCATCCGTAATC 982683 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ===================================== ================== 24 32 100.0 34 GTCTCCACCCTCGTGGTGGAGTGGATTGAAAT # Left flank : TGCTGGTACTGATTACATATGATGTGAATACGGAAACCGCCGCAGGCAGGGCCAGGTTGAGAAAGGTTGCAAAGCAATGTGTCAATTATGGCACCCGCGTCCAGAACTCCGTATTTGAATGTATTTTGGATAATGCCCAGCTGATAAAGCTAAAGGCGATACTGACAGATATAATTGATGAACAGACGGACAGCCTTAGGTTTTACAACCTTGGGAATAAACACACTACAAAAGTGAACCATGTTGGGATGAATAAGGGGATTAATGTGGAAGAACCGCTGATATTCTGACCTGGCCGCGGGCGGTAAAGCGGTATAAAGTATTTTGGTGCGAACCTGAAGCAAACATGGATTTACGGGGAGATTCGCACCGGAAAATTTGCACAATGAGAACGGATTTGCGAGTGTGCAGGGATGGTTGGCCGTGATTTGAGGGGGTGGGATATGATTTGTTTGTGGAAATGTGTTGAAGAATAGTAGTGGTTATTGTGTAGTATTGCT # Right flank : TCCGGGGTAGTCTCATAGCCGTTCACATAATAGCGTCTCCGCTCTCGCGTCGGAGCAAGTTAAAAATCCGCCAATTACAGAATTACATCCAGTTGCCCACTCCTCTGCCCTTTTCGCAAACGCCGCAATCCCTTTTGAACTGCAAAAAAGGTTAGGTAAAACTAATTCCGTACAACAAAAAAGATGGGGCAAGCCCCATCCCTTCCATAATCTTGTTAGAATGTACAAAGAATGCATACTTCCATTATCCCTTCCATGCCCGAATCTCTTTAAGCCCCGGCACCAGCACCTTAGCGCTGGTTTCCAGAATGATCCGTCCCTTTTCAGCTGTGGCGCCTGAGGGGTCTCCGCCGATTCCGATGGGTTTGCCGTCTGCTGTTTTCCAATCCTCGGATACCCAGCCAATGGATACATTTCCGTAAGGTTTCAGCGCCTGATTGTCTTTAAATGCAGTGGGAATTCCTGCCTCTGAGGTCTCTGACTTTACCAGGGACGGGTCC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCACCCTCGTGGTGGAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCTCCACCCTCGTGGTGGAGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.10,-5.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [43.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //