Array 1 846903-848851 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP040902.1 Longibaculum sp. KGMB06250 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 846903 36 100.0 30 .................................... ATTTAAAGTTAACTATAATTGGTTGACTGA 846969 36 100.0 30 .................................... AAACCTTTGCACCACGTTGTAATACAGCTT 847035 36 100.0 30 .................................... ATCGAGTGCGAATACGAATGTTTCTTTGAT 847101 36 100.0 30 .................................... TGTTACATTAAGTGGATGTACTAAAGTCAT 847167 36 100.0 30 .................................... ATATATATCAACAATTGGACTTTATTACAA 847233 36 100.0 30 .................................... AACCCTAAATCTTGATCATAATTTCCCGTA 847299 36 100.0 30 .................................... CCCGCTTTTATTTATAAATAAAAGGTCTAA 847365 36 100.0 30 .................................... CCCGCTTTTATTTATAAATAAAAGGTCTAA 847431 36 100.0 30 .................................... GAAATCTATTTACGCTTATAACTGGTCAGT 847497 36 100.0 30 .................................... TATTCTTGATTAGAAAAAGACTAGGTGTAA 847563 36 100.0 29 .................................... TTCGAGTGTATATGAAAATACACACAGAA 847628 36 100.0 30 .................................... TTATAATACAGCGTTCCATATTTGGATGGA 847694 36 100.0 30 .................................... TCGTACGTGGTAATGATGATGAATTCTGTA 847760 36 100.0 30 .................................... TTTAGTTCAAATGAACTCAGGCATGTACTT 847826 36 100.0 30 .................................... AGCTATGAACGGCTTTATTGGTGCTATCTA 847892 36 100.0 30 .................................... AAGAAGAAACTCAACAAAGAGACCCTCAAA 847958 36 100.0 30 .................................... AGTTGTACCACAGACACCACCACAAGCCCT 848024 36 100.0 30 .................................... GACAGCCCGTCATCATCTGGAATGACCGCA 848090 36 100.0 30 .................................... TACAAAATCAGAAGTAACGACAGTTGAAAC 848156 36 97.2 30 ...........C........................ TCGGTTTTGAAATAATCTTTCTTGAGTGTC 848222 36 100.0 30 .................................... AAAAATTGTTGAATGATAGCCTGGCATTTC 848288 36 100.0 30 .................................... GATAATGATAAGAAAAGCATTATACTATAT 848354 36 100.0 30 .................................... AGCTTTTTAGTGTAATATAGGTATCGTCAA 848420 36 100.0 30 .................................... TAAACAATTACAAAACACCTTATGAATTGT 848486 36 100.0 30 .................................... TATCGTAACCCCAACCCAAAAAGCGTTTCA 848552 36 100.0 30 .................................... GAAAATTTAAAAATCATCTAGGGGACTGTA 848618 36 100.0 30 .................................... ATTAGTTGATAGTGGAAAAAAGGATGATAG 848684 36 100.0 30 .................................... AAATGCGATTGCTTGGAGTGCTGCTATAAA 848750 36 97.2 30 ......................G............. AATTCAACTATGTAATGATATATTAAAAAC 848816 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 30 36 99.8 30 GTTTTAGAAGTGTGTTATTTTGAATGATTACAAAAC # Left flank : TGATAAAACTATTATTACTAAATTATATAATAAGTTATCTAAAAGTATAATATCGAATGTAGAGATTGATAATGAATTAAAAAAATATTTTATGAAGATTTCAAATATTTTATATGATGAAATTGAATACTATAATGTTGATATTGATTTAAATGAAGAAATAGATTTAGTAAAATATTTTAAATTAGCTGGAATTGAATTTGATAATAAGCATAATAATCTAATCGAAAAATTTATTGATATATTAGAGATATATTCAGAATTGTATGATCAAACAATGATATTTATTAATGTACTAACATATTTTTCAAATGAAGAAATTAGAGAAATATTAAAGTATATAACTTATAAAAAAATAAGTGTTTTATTTTTAGAAAATAGTTATAATAGGAGTGTGTATTTTGAAAATAAATATGTCATAGATGATGATTTCTATGATTATATCATTCATGATGACAAAAGTTAGTGTTGGCTTTTATAACTTTAAAACCTGATTTGAG # Right flank : CGGAACAATGTGATCAATACAAGGTGACAGTGTTTTAGAAGTATGTTATTTTGGAATAAAAATATTCTAGCAAAAATCCATAGTTTTATAGTTGTGTTTATATTTTGAATAGTAATAAAAAATCCAGAGATTTCTTCATCTCTGGATTAAGTGTATTTAAATATAAATTTATAATATATAACTTAATTGCCCATCTGAAACAGGTGGTGATTAGGTGTTAAGTTTTGTACATGTAAAAGCCATAATTTTACTTATAAAATTATGGTTTAAATTTTATGAATTCAAATCTTATTTAAAAAGATGTGTCATATGGTTTATTAAGATATATAATAAAAATATTTATATAAAATAAAAAACAACCCGAAGGTTGTTGTTTATTAAATGGCGTCCACGAAGGGATTCGAACCCCTGACCGCACGCTTAGAAGGCGTGTGCTCTATCCAGCTGAGCTACGTAGACATTACTTACTTTCAACTGCTCATATATATTAGCATGAATAT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGTGTGTTATTTTGAATGATTACAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.70,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 2 2847055-2847974 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP040902.1 Longibaculum sp. KGMB06250 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 2847055 32 100.0 38 ................................ AAATAATCAAACACTAACATTGCAATCCCAAAAATTAA 2847125 32 96.9 35 ...............................C TAATTTCTTTGATTATTTGTTCATCGTTTTCTTCA 2847192 32 100.0 37 ................................ AGATTTGTTAAATAAAATTGAGTAAGTTTTTATATTT 2847261 32 100.0 37 ................................ TTTATATACTATTTTTTTATTGATTTGATTTTCTATT 2847330 32 100.0 37 ................................ TTTGTCCAAAATGGTCAGTAAATCTATAACATTGTTT 2847399 32 100.0 35 ................................ TTCACAGGCATATTCATTATATTCACTTAATGAGA 2847466 32 96.9 35 ...............................C AAGAGAAAAGAGCTTATTGGAACGTATCGAAGATG 2847533 32 100.0 38 ................................ ATAATATTTCAATAATTCATATTCTAGTCTTGATAAAG 2847603 32 96.9 38 ...............................A AACGAGGTATCTCTATTCCCTCATTTTTTAATTCTTCT 2847673 32 100.0 33 ................................ TGACACATGATAAGAATTGTTGTTCAAGTTTTT 2847738 32 100.0 36 ................................ CATACGTATATAACTGACAAATACTAGCAAAACTAA 2847806 32 96.9 38 ...............................C TACTTGTTTTTGCTAATTCATCACTAACACCCTTTTCA 2847876 32 100.0 36 ................................ CTTTGATTTCGGTAACGATATATTTATCGTTTACAT 2847944 31 78.1 0 ......C.....G........-....T.TTT. | ========== ====== ====== ====== ================================ ====================================== ================== 14 32 97.5 36 GTTAGATATCATACTTATTAAGGATTAACGCT # Left flank : CGTGAAGTTCACTTGCTTTCTAATTACATCGCTAATGAATCAAATGATTATAAACCATATATTATGAAGTGGTAAAATGTATATAATTTGTACTTATGATGTAAAAAGCAAGAACTGTCCAAAGTTTATGAAGTTGTTAAGAAGATATCTTTTTCATGTTCAAGAATCTGTATTTGAAGGTGAACTTACACCAGCAACATATAAAAAATTAACTAAAGAGTTAGAAAAAATCATTACAGATGCTGATCATGTTGCAATCTATTATTCATATAATTCTAAAATGATTAAGAAACAAGAAATCGGTAATTCTATTGATAAAACACGTTTCATAATAGATTAATATCGACTATCCCCTAATTACTATAAGAATTTCATTACAAAAAACTTATATTTTTGATAGATAGTCGATATTTCTAATCATTTTTCTTCTTAATTTTACATATTTTTAGTATATTAACAAATCAATTTATATTATTCATTAAATATGTTAATATTTCATT # Right flank : TTATTTCTATCTAATAATGAAAAAACTATATTTTATGTTCTTCTTTTAGTACAATAGAATATATACAAAGGAGAGCGTTATGAGTAAAATTGTATTTTTAGATGTTGATGGAACTTTAATTGACTATGAAACAAAGTTACCTGATTCAGCAAGAAAAGCTGTTGATCAAGCCAGAGCTAATGGACATAAAGCCTATATTTGTACAGGTTGTTCTAAAGATGAAATCTTACAAAGAAATCTATGTGAGTTAGATGGGATGATTTTAGGAAATGGTACTTATGTAGAAGATCATGATCATGTTATTATGCATCAAGCACTGCCTTTAGAAGAAGTAAAAAAGATTGTTCATTGGTGTAAAGAAAGAAAACTTGCTTTTTATTTAGAAACAAATAGTGGAGTTTATTGTAATGATCAAATGATTAAAGATGGACCGGCTGTAATGATTAAATACGGTCAAGGTAAAGGAGCTAATCTTGAAAATGCGAAAGAAAAAGCACAAA # Questionable array : NO Score: 3.14 # Score Detail : 1:0, 2:0, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAGATATCATACTTATTAAGGATTAACGCT # Alternate repeat : GTTAGATATCATACTTATTAAGGATTAACGCC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:71.88%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [90.0-83.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //