Array 1 11753-11227 **** Predicted by CRISPRDetect 2.4 *** >NZ_JQJI01000021.1 Mesoaciditoga lauensis cd-1655R = DSM 25116 EK18DRAFT_scaffold00019.19_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================================================================================================================== ================== 11752 30 100.0 36 .............................. ATAGTAACTGGTCATGGTACCCAGTTCCAAAAAACA 11686 30 100.0 35 .............................. TGCGCCTCTCACACTCTTCAACGAGGGCCTTGAGC 11621 30 100.0 36 .............................. GAAACGTCTATATCGTCGTTAAGCGTTTCTTTTAAT 11555 30 100.0 35 .............................. TGTTCCTCTCACTCTTTTCATTGCTTTTGTTGAGC 11490 30 100.0 36 .............................. GAAACGTCTATATCGTCGTTAAGCGTTTCTTTTAAT 11424 30 100.0 134 .............................. AAGTATTTGTCCTCCAAGAAGACCCACCAGCATTTCCGTTTCTAACCTACCTTACTGCCTGCGCGGCCGCCACAAGACAGGCGAAAAGGAATGAAAACTCTTTTGCATCTTTACCTCTAATCGTTTCAACTTTA 11260 30 86.7 0 ................ATT..T........ | T,TTC [11230,11238] ========== ====== ====== ====== ============================== ====================================================================================================================================== ================== 7 30 98.1 52 GTTCCTAACCTACCTTTAAGGAATGAAAAC # Left flank : AGGATAAGATCATTGAAGAAAAAGATAGCGTGCTTTTCTTCAAATTCAAAAACAACAAAGTTTTCAAAAAAGAGGTAATGGGAAAAGATAAAAATCCCATTTCCGATGATCAATCTTATATGGTATGAAGGACAATTGGCTATTTTTAGACGCTTATTTTTTCTTTCTCTTTGAGATATAGTTTCATTTTATTTGCGCTCGCGAATTAAAGGCAAACACCTCTCTACGCTAAAAAGAAACGTTTTTCCTTGTTTTGAATGCATTCATGATAATGCTATGGATAGGAGGATACAATAAAAAAACGCCCATTTTTGTTACATCTGTGTTTCTTTCTTCGTCGACCCCCGATAGTGCAAAAACCCCTGGGGATCGACGAATTTTTTTAATTTTCCTTTTTGCCTTGTTTAATAGCTATCTTCAAAAAATCACACTTTTGACAAACGAAATTTTTTCATTTTCTTGTAAAATCAACTTTCCTTATGCTATAATGCATTTGACGG # Right flank : TCAGAACAAGCGAAAAGGAATGAAAAGCATTCGCTAATTTTTTCCCCCTACGGCAGCAGAGCTGCCACTTCCCCCGCAAGCGGGGGCAGACTTATAAAATGAAATAGCTTCGCCATTACTTTTCCTGTAAATGAGGGCAGACTTTTTAATTTGGAAAACAATTCTGCTGATTCTCCTCCCAAAACTGGGAGGAGTGGCAACTCCGTTGGCGAGGAGGGTTCAACTACGCCCGCGCGATCATCACGAAACCAGTGAAAAGGAATGAAAGATGCTTCGTTAATTATTCCCCCTACGTCGGCTTCGCCGCCACTTCCCCCGCAAACGGGGGCAGACTTTTAAAATTTGGAAAAATAACTCCGTTGATTCTCCTCCCAAGCCTGGGAGGAGAGGGCCAACACCGTTGGCGAGGAGGGTTCAATCACGCCCGCGCGATCATCACAAAACCAGTGAAAAGGAATGAAAGATGCTTTGCTAATTATCTCCCCCTACGTCGGCTTCGC # Questionable array : NO Score: 3.06 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCTAACCTACCTTTAAGGAATGAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.00,-1.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [55.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA // Array 2 21591-20763 **** Predicted by CRISPRDetect 2.4 *** >NZ_JQJI01000021.1 Mesoaciditoga lauensis cd-1655R = DSM 25116 EK18DRAFT_scaffold00019.19_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 21590 30 100.0 38 .............................. TGAAATGAGCTTTTTGAGAGAGGCTAACGATGCGCTTT 21522 30 100.0 34 .............................. TGGATCCACCGTGAAACATTAACTTGTACGTACA 21458 30 100.0 35 .............................. AGATAGGCCAACAGGCCCATCTCTAAACTCGTTGT 21393 30 100.0 37 .............................. ATTTTGAAACCTTTGTACTCCAATTCGTTAGCTAAAA 21326 30 100.0 35 .............................. CTGTTTTTGGCGGCGGCTTCAGCAGCCGCTAGTTC 21261 30 100.0 38 .............................. TCGAGGTCCTCATGGAGGAGTGTTAAAAAAGCGGCATG 21193 30 100.0 36 .............................. AATATACCGCCCTCAGTGGGCATTACCTTAAGGGCC 21127 30 100.0 38 .............................. AAAACTCAGAAACAGGATTGACTTCTTCTAACGGTTCA 21059 30 100.0 37 .............................. ATACCACGAAGCGTTAGAATATGCAACCCCGATAACA 20992 30 100.0 37 .............................. TCCTTTTTTCACGTAATACTTTAACATTGTTCTTGCG 20925 30 100.0 37 .............................. TTGATGTTGCTCAAAACTTTTACCACGCCGTCAATGC 20858 30 100.0 36 .............................. CTGAATCTTCTTTATCTCGGATATGCCCCAAACAGG 20792 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 13 30 100.0 37 GTTCCTAACCTACCTTTAAGGAATGAAAAC # Left flank : ATCAATAAGAGAATCTGCAATATCATATTACAAAAAGCATGGAAAATGGCCAGAATACATGTCCGCTCAGGATATAGTAAAAGCTAAACGATATATGGAAAAAATGGAACATAAAAACAAAAATACGAACTGGAAATGAAGAGTTTTCGGCACTTATTTTTTCTTTCTCTTTGAGATATAGTTTCATTTTATTTGCGCTCGCGAATTAAAGGCAAACACCTCTCTACGTCAAAAAGAAGCGTTTTTCCTTGTTTTGAATGCATTCATGACAATGCTATGGATAGGAGGATACAATAAAAAAACGCCCATTTTTGTTACATCTGTGTTTCTTTGTTCGTCGACCCCCGATAGTGCAAAAACCCCTGGGGATCGACGAATTTTTTTAATTTTCGTTTTTACCTTGTTTAATATCTATCTCCAAAAAATCACACTTTTGACAAACGGAATTTTTTCATTTTCTTGTGAAATCAACTTTCCTTATGCTATAATGTGTTTGACGA # Right flank : GGTGGCGTGACAACCATAATACTTTCTTCATATTGCGTTCCTAACCTACCTTACCGCCTGCGCGGCCGCCACAAGACAGGCGAAAAGGAATGAAAACGGCAGCGTGTGGCAGCCACTCTCACGGTGCACGCAATTCTTAACCTACCTTACTGCTTGTATGAATAACTCAGAACAAGCGAGAAGGAATGAAAAATGCTTAGTTAATTATTCCCCCTACGGCAGCAGAGCTGCCACTTCCCCCGCAAGCGGGGGCAGACTTACTAAATGAAATGGCTTCGCTGACACTTTCTCCTGTAAAGGTGGGCAGATTTATAAAATGAAATAGCTTCACTGTCACTTCTTCTGCAAACGAGTGCAGACTTTTTAAATTTGGAAAAATAACTCTGTTGATTCTCCTCCCAAAACTGGGAAAGCCCCCTTCGGCAGCAGAGCTGCCACTTCCCCCGCAAGCAGGGGCAGAATATCCGTAAAATGGCGAGGGGGGTTCAATCACGCCCGCG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCTAACCTACCTTTAAGGAATGAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.00,-1.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [53.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA //