Array 1 44-313 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACDZC010000139.1 Acinetobacter baumannii strain 547_16 NODE_213_length_367_cov_0.691667, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ============================== ================== 44 30 100.0 30 .............................. AAATCACATCAGGGAAGTGAAGGCGAGCTA 104 30 93.3 30 ........................A...G. GAATGAATTAAATTGCATTAAGACCTTAAA 164 30 96.7 30 .............................C GTTGCTACGCGCCACGGCGCACCCATCGTT 224 30 96.7 30 .............................T TAATCGGCCGCTTTGCGTATAAACACCACC 284 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ============================== ================== 5 30 97.3 30 GTTCATGGCGGCATACGCCATTTAGAAATA # Left flank : CCATTTAGAAATTTAATCGGCCGCTTTGCGTATAAACACCACCG # Right flank : AAATCACATCAGGGAAGTGAAGGCGAGCTAGTTCATGGCGGCATACGCCATTTA # Questionable array : NO Score: 5.84 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.17%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.41 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 110944-113556 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACDZC010000005.1 Acinetobacter baumannii strain 547_16 NODE_5_length_224547_cov_116.433945, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 110944 30 96.7 30 ............................A. ACGCGATATTGGCAATATCTGGCGAGATAA 111004 30 93.3 30 ............................AG TCGGCACAGGTAGCAGTTGAGCAGTCATCG 111064 30 93.3 30 ............................GA GTTCTTTCATAACGTAGGCTTTAATGCCTG 111124 30 93.3 30 ............................AA CGTTTCCGCAAATCTGCGAAATACTCGTTG 111184 30 93.3 30 ............................AA TATAGTGGCATCTTCGAGAGTTAAAGGCGG 111244 30 96.7 30 ............................A. CAGAATTTTGTTTACAAGTTCTAAGCGGGA 111304 30 93.3 30 ............................AG TTTGAACATCTAATAATTGAGCTGTAATAC 111364 30 93.3 30 ............................GC CTCCAATTGATCCAATTGATCAACCTCCAT 111424 30 96.7 30 ............................A. ATGGTGGTTGTTATAAACCGCCTAATGATA 111484 30 96.7 30 ............................A. TAGAAGACGTGGACTCCCCCAACCTTTCAA 111544 30 100.0 30 .............................. TGCGCTCTTGCGGTTATTATCAAAGACCTC 111604 30 93.3 30 ............................AG CATGTGCTAAATCAGGGAAAAGAAAAGCCA 111664 30 96.7 30 .............................A ATTATAATCGCAATAGCTTCAATACTCCTA 111724 30 93.3 30 ............................AG TGCGTGAACATTATTCTTTCTGCATCAGCT 111784 30 93.3 30 ............................CG GTACGTTCAACGGTCAGCAGATTTGTGTTA 111844 30 96.7 30 ............................A. TAATAGTAATCGTAGTGGCGGTGTGTCAAT 111904 30 100.0 30 .............................. AACTTGCTTACGGCCAACACCTGTAATCAA 111964 30 93.3 30 ............................AG CCAACTTAATAGTAGAAAGGTAATGCCCTT 112024 30 96.7 30 .............................A CCAAACCAATCAGCAATGGAAAAACCACCG 112084 30 96.7 30 .............................A TAAAACGCGCAAAAAAATATAAGGGACGTA 112144 30 100.0 30 .............................. AAACTGATTTACAAGCTTGATCAGTAGGCC 112204 30 96.7 30 ............................A. CATGAAGCTTATTAAATGACTGACATGGCT 112264 30 93.3 30 ............................AA AGATTCTAGCCCCCTCAATTGAGAAGTTAT 112324 30 96.7 30 .............................A TTTAGAAAGCTTGGAAAATAAAGGTGACTA 112384 30 100.0 31 .............................. TGCCGATGCGTGCAAACATTTGCTCCGCTTC 112445 30 100.0 30 .............................. ATAGATGGCTTTAACTGACTCCCAGCCCAT 112505 30 96.7 30 .............................A TAAGAAAAATGCAAAAAAGGCATTTATTAG 112565 30 96.7 30 ............................A. ACACATGTTTTTCTAATAAGAATAAGACAA 112625 30 100.0 31 .............................. ACCAGATAGCAACTCTCTAGGTCAGATAGAC 112686 30 93.3 30 ............................CC AGACTTGATTTTTATCACCATTGAAGAGTT 112746 30 96.7 30 .............................C AGGTAATAAAAAACCGCCCGAAGGCGGTAT 112806 30 96.7 30 .............................C AAAACGTATGGGTTATTGATGCTCAAGATT 112866 30 96.7 30 .............................C GTTGCTACGCGCCACGGCGCACCCATCGTT 112926 30 100.0 30 .............................. GAATCGGCCGCTTTGCGTATAAACACCACC 112986 30 96.7 30 .............................A AAATCACATCAGGGAAGTGAAGGCGAGCTA 113046 30 93.3 30 ............................GA GAATGATTTAAATTGCATTAAGCCTTTAAA 113106 30 96.7 30 .............................G GAAGTCATGAATGTAGGTGTTGAGGATGGC 113166 30 93.3 30 ............................AA TAGAATTAAAACCACGTTGATAATATAGGT 113226 30 96.7 31 ............................G. AAAAAAGAGCATTTCCAGCAAAAATTGACGA 113287 30 100.0 30 .............................. TAAAGCTAAATGAGGGTTAAACCTAAGAAA 113347 30 90.0 30 .......T....................AA CGTGAACAATTGTTTTAGCTTTGAACATTA 113407 30 90.0 30 .............C...T..........G. TACTGGGTTGCGGAATATATTCGCAATTAT 113467 30 86.7 30 A......A.........T..........A. TTTGATCTTTACTTATTCTCGCTTCAAACA 113527 30 73.3 0 .......A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 44 30 95.2 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCCTAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAAGATAAACAATAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTAAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGTAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAGCCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGCCAAAGTGACGGTGAAATTACCGATGCAAAATCGCAGTTACCAGAAGGTGTCATTATTGGCCGTACTTGCTTAAACTCTTTAGAGCTTGCTCAAAAAGCAATTGCCGATGGCGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAAC # Questionable array : NO Score: 5.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.23, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //