Array 1 10314-12843 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAESJE010000074.1 Rhodovulum sulfidophilum strain AB16 NODE_74_length_16459_cov_4.86187_ID_9992, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 10314 29 100.0 32 ............................. TAGATCGCCGCGGCGCCCCATTGCGCCTGAAT 10375 29 100.0 32 ............................. GCTTCAACGCGACGGGCGAGTTTGAGGCGGAC 10436 29 96.6 32 ............................C CAACGCCTCCGTGACGATCGAGGGCGTAGACC 10497 29 100.0 32 ............................. GACTACAACGCAGTCTATGGCGCGTTGCAGAT 10558 29 100.0 32 ............................. TCCCCCAACCACTTTGACGCGGTCAAGATCCT 10619 29 100.0 32 ............................. CGCCAAAGAGTACGCCGAGACCAACCTCATGA 10680 29 100.0 32 ............................. ACTTTCCTCCAGATCACCGCCGATATCCGCAT 10741 29 100.0 32 ............................. ACAAACCCGACCCCCTGCATGCCCGCTGCTCG 10802 29 100.0 32 ............................. AGAGACCACCATGCACCATATTTACAGCACCC 10863 29 100.0 32 ............................. ACCTCGCGCAGGAGGTAGTTGGTAAAAGGCAC 10924 29 100.0 32 ............................. CCCGCATCCCCTGAGGTGAGCGTGCGGCAAAG 10985 29 100.0 32 ............................. GCCCGACGGACCCTCTTGCCACGCACACCACC 11046 29 100.0 32 ............................. ACCGATGTGATCAGCGGGGCCGTGGGTGATGT 11107 29 100.0 32 ............................. AACCCCGCGCTGCGCATCCGGCCAGAGGAAGA 11168 29 100.0 32 ............................. GCACCCGTGACGCATACGACGAATACCTTCTC 11229 29 100.0 32 ............................. GTGGGGTGGTTTGAGAGCGCCCGCTATGAGGA 11290 29 100.0 32 ............................. ACATGCGCGGTAGGCAATGCCCGGCGTGCCGC 11351 29 100.0 32 ............................. GACATCTACCTGGTGTCCTGTTCCCAGATGGG 11412 29 100.0 32 ............................. CTGCGGTTGCTTCATCTGTTGCTCAGGAATAC 11473 29 100.0 32 ............................. ACCTGCGGAACGCCGGCCTCATTAAGCTCGAC 11534 29 100.0 32 ............................. GGGTGTACAGCTGACCTCTGGCACGGGAACCC 11595 29 100.0 32 ............................. GCCACCGCTCATACTGCGTACTCTCGTTGACA 11656 29 100.0 32 ............................. AGCCCAGAGGCCCCGGAGCCCGCGGCAATGGA 11717 29 100.0 32 ............................. CGAATTGAGCAGGTCCCGGCGTTTGTTGCGAG 11778 29 100.0 32 ............................. CGCCTCGTGCTGCGGATGCGCTACTACCAGCT 11839 29 100.0 32 ............................. CGAACGACCTGACCGAGTTTGTGGACCGCCAC 11900 29 100.0 32 ............................. GGTGTGCTGGGCCATGGCCGCCTCTCAAAGGT 11961 29 100.0 32 ............................. CCGACACGGATACGCCCACGCTGAACAGCGTC 12022 29 100.0 32 ............................. CCCATGCGATTGAACGTCCGCTGTCGAGAACG 12083 29 100.0 32 ............................. CGGCTCAACGTTCTTAAGACGGACTTGGCGGC 12144 29 100.0 32 ............................. ATCGAAGCGCTTCATTTCATTCCTCCTTTTCA 12205 29 100.0 32 ............................. ATGCGGGTGGTGGCATCGCCGGAGCTGGACGG 12266 29 100.0 32 ............................. ATCAATGAGGATACCGGTTTCACCGTGCAAAG 12327 29 100.0 32 ............................. CAGACTGCCGCCTTCGCTCGCGAGCGGCAGAA 12388 29 100.0 32 ............................. GACGCAACCTCAACCATTGGCACCAGAGACGC 12449 29 100.0 32 ............................. CTCTGCCACGGTCCCCAGGCTGCGCCGTCATA 12510 29 100.0 32 ............................. GAGTCACCAAAAAAGGGGCCGGTGGGCAATAC 12571 29 100.0 32 ............................. ATCGTGACCAACTCCCAGAAGTCCATCACGTC 12632 29 100.0 32 ............................. CGGCTGGTAAATGCCGCGCACGTCGGCCTGGT 12693 29 100.0 32 ............................. CTGGGCTACTATGTGACGGTCAGCGGTGCGGC 12754 29 100.0 32 ............................. ATGCCCGGCGGATCGACCATCGAAATCGAGTA 12815 29 96.6 0 ..........................T.. | ========== ====== ====== ====== ============================= ================================ ================== 42 29 99.8 32 CTGTTCCCCGCACACGCGGGGATGAACCG # Left flank : CTGGCCTGCTAAAGAGGATCATTCCTGCCATCGAGGAGGTTCTCTCGGCCGGAAACCTTCCTCGTCCCGAGCCGCCGCCCGAGGCCGTTTCTCCCGCTTTTCCCGATGCGCCGCCGACGGGCGATGCCGGTCACCGATAGTCTATGTTGGTTGTTGTCGTCTCCAACGCCCCACCGCGCCTCCGGGGCAGGCTGTCTGCCTGGTTGGTCGAGGTGCGCGCAGGGGTTTATGTCGGCGACTATTCGGCCCGGACGCGCGAGATGATCTGGGAACAGGTTCTGGCCGGGCTTGATAAGGGGGATGCCGTCATGGTTTGGAAGGCACCGACCGATCAGGGCTACGACTTTGTGACGGCAGGTCAGAACCGCAGGATGCCGGTGGATTTCGACGGATTGAAATTGGTCAGTTTCTTCCCCGAGCCACCAAGCCGATAGGCGGAAGAGGACGGTAGGCTCTTTGACATCGTGAAAAATTTTTTAGATCAACGGTTTGCAGTAAGA # Right flank : GGAGGAGTCGGCCGCACTCTGATAGAAAGTTCCCGTTCTCTGCGCGCCTGGGAGTGAAGCGAGAGCTTGCTAATCATTCCGAATGACTTCCGGTTGTCGTGTACAAAAGCGTCGCGTGGCCGTGCGTCAGCGCTCAACAGATTAACTCCCTCTGACCGCTTCGCCGATCCGCCGCCCGATCTCGCCGGGCGAGGGCGCGATCCATCCGATCAGCGCGACCAGCACGATCCAGGGCGGGATGACATTGACGATGACGGTCTCGACGCGGTCGGCGCGGAGGCGGTTCTCGGATTGCTCCTGGCGGATCTCGCGGGCGCGGGGCCGGACGATGCTGGGGGCGTTCTCGACCTTCTGCCCCTGCACGTTTTCGGCCCCGGCCTGGACATTCGCGGCGATATTGGGGCCGAGCGGCACGGGCAGCCCGCCGCACCCGGCCAGCAGCAGCGCCGCGAGGAGCGCCCTCATGCGCCGCCCCAGCGGAACGGCACCTCGGCGGGAAC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTCCCCGCACACGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCACACGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [60.0-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //