Array 1 355313-350604 **** Predicted by CRISPRDetect 2.4 *** >NC_009714.1 Campylobacter hominis ATCC BAA-381, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =========================================== ================== 355312 30 100.0 36 .............................. TCGAAAGACAGAGAAACATAACATTCACGCATTTTT 355246 30 100.0 35 .............................. TAGATTTCATTTCCATTTTTGTCTTTAAGCCCGGT 355181 30 100.0 35 .............................. TTTATTATTGATAAAGGGAAAAATTTTCTATTTAA 355116 30 100.0 36 .............................. AGCTTTCCAAAATATCCTCGCAGCTTCTATAAAAGT 355050 30 100.0 36 .............................. TTAAACATTATTTTTTAACTGCGCTTATTTTATAAA 354984 30 100.0 36 .............................. CTTATAATTCTAAAGATGGTAAAGTTTATAAAAGCG 354918 30 100.0 36 .............................. CCCTTTAAAAGTTTTAAACCTTTTAATTCAAGCATT 354852 30 100.0 37 .............................. AAAGAAGTTGATGGAAAAATAATTGATACTTGCACGA 354785 30 100.0 36 .............................. ATAGCTTCAAAGGTGCTGAAATCGCCTTTTAAAGCT 354719 30 100.0 37 .............................. CTTCTAGTAGCCCAAATTTTTGTTTTTTCTATTTTTG 354652 30 100.0 36 .............................. TTTAGCCGCTAAATACGGCTTTGCGGTATTATTAAA 354586 30 100.0 37 .............................. GCTTTAAAAATCCGAAAGACTACGAAAAAGAAGCAAC 354519 30 100.0 35 .............................. TTCGCGCAATACGGACAGATCATAACTCTTTACTC 354454 30 100.0 37 .............................. CCAAATGTACCCTCGTTATCCACACCTATACACATTC 354387 30 100.0 34 .............................. TTCATGGCTTCCTGCCACTTCGGATTTGTTATCG 354323 30 100.0 37 .............................. GTTTCAACGCCACCTGAGATATAATTAACTAACTCGC 354256 30 100.0 35 .............................. ATATATTTTTTCATTAATTCCAAAATACCCATAAA 354191 30 100.0 38 .............................. AAGTGATGAAAAAAATGTTTATAAATTTACTTGTAAGC 354123 30 100.0 37 .............................. AAATGGCTGTTCCTGTTTGGGTTTATAGGAAAATAAA 354056 30 100.0 38 .............................. ATAAATTTAACATAACGATTAAAAACCATTTCTGTAGT 353988 30 100.0 34 .............................. TTTAAAATTTTAAAGGAATAAAAAATGGCGGCGG 353924 30 100.0 37 .............................. ATTAGTTTTTCTGCTCCTAGTATTTTTACTAGCACAT 353857 30 100.0 36 .............................. TCAAGCCCGAAAATTACGAAATCGTGGTAACCTTTA 353791 30 100.0 37 .............................. TTATCCAATTTTTCAACTGAAGTTTTAAAATTTAAAG 353724 30 100.0 34 .............................. ATTTCCAAAAACTTATTTTTTATATCTTCATATA 353660 30 100.0 35 .............................. CCAACTCTTCGATTTTTCCTAAAAGTTCCTTTGAA 353595 30 100.0 36 .............................. TAAGCGCGTCCATTTTTTTCTATCATGTCCGGCACA 353529 30 100.0 35 .............................. TTTTTCTAGTTCTTTCTTTATATTAGGACATTCAA 353464 30 100.0 35 .............................. TATACCCCGTTAAATATGCAGGATTAAGTCCCAAA 353399 30 100.0 36 .............................. TAGACAATGTGAGTTTTGAATTAATGGCGCTTAAAG 353333 30 100.0 35 .............................. TTATTTATACGGCAAGCCCTCAGACACAAAAATAG 353268 30 100.0 35 .............................. TTATTTATACGGCAAGCCCTCAGACACAAAAATAG 353203 30 100.0 33 .............................. GCAAATAATAGCAAATGCCGGAGATAAAGGAGC 353140 30 100.0 34 .............................. TCTTCATTCAATACATTATTTGTTATTTTTTCAG 353076 30 100.0 37 .............................. TTATATAAAATCGCTCTTTCTGCAAGGCTCATTTCGC 353009 30 100.0 35 .............................. AAAATTATAGTTTATAAAAAACTTAATTTTTTATT 352944 30 100.0 36 .............................. TCATAAAGTTTATTTAATTCCCAAGGCTCATTTTTT 352878 30 100.0 36 .............................. GTGGCTTTGGCGCCTTGATAAAATCATCATTTTTAT 352812 30 100.0 36 .............................. ACGAAAATAAGAAAGATAAAAAAATAGAAAAATTAT 352746 30 100.0 36 .............................. GTTTTTAAATTAGATACATAATTAAATAAATCATTA 352680 30 100.0 36 .............................. AAGTGTTTTCATCTTGCAAAGTGTCATAAACCAAGT 352614 30 100.0 36 .............................. TCAAGTTTGGCGCCGAAATATACATTAAAATAAATG 352548 30 100.0 36 .............................. AAAGAGCCGATATCTGCGAAGCAAAACTGGAAGAGC 352482 30 100.0 38 .............................. TAATGTTAAAACAACTCTTAATGAAGATAAAATTTATT 352414 30 100.0 36 .............................. CTACGAAACTTATTCCAAAGCCCTCATCTTTAAGTG 352348 30 100.0 35 .............................. TAAACGGAGTAACGTCCAATTTACCACCTATAGCA 352283 30 100.0 36 .............................. CTACGAAACTTATTCCAAAGCCCTCATCTTTAAGTG 352217 30 100.0 36 .............................. TTGTAACTGAGCACAAACTTCCCTTTTATGTTTTTT 352151 30 100.0 36 .............................. CCCGTAATTTTGTTAATTTCTCCCAAAAAAGCCCTG 352085 30 100.0 36 .............................. CCCGTAATTTTGTTAATTTCTCCCAAAAAAGCCCTG 352019 30 100.0 36 .............................. AACGGCGACACAATATCTTAATAACAGCTTTATCAA 351953 30 100.0 36 .............................. CTATACGCCCACAATCCACAAGTATAATATACAGTA 351887 30 100.0 35 .............................. TCTGTTATTCTTATAATTGCTTACCGTTTCGGTAT 351822 30 100.0 35 .............................. ACTTGCAAAAACTTTGGGACTTAATCCTGCATATT 351757 30 100.0 35 .............................. GCTAATGTATTAGCTGCAAATCTTCCACCACCTTT 351692 30 100.0 36 .............................. AACATATCCTGTAAATTAGTGTATTCAATACACCTT 351626 30 100.0 36 .............................. TTTATTCGCACGTTTAAATCGTCCCAAAGTTTTTTA 351560 30 100.0 36 .............................. CTTAATATTAAAGTATCTAAATCGTAAAATTTTGTT 351494 30 100.0 36 .............................. TCTTGTAATGAGTATGATTTTAGTCTTTCTTGTGAA 351428 30 100.0 36 .............................. TGTAATAGCGCATACTTTAACGATTATGCTACTATC 351362 30 100.0 36 .............................. ATGGTTTTATCAAGTTTATAAAATCCTAATTTTTCT 351296 30 100.0 36 .............................. CTTGCTCTTCCAAGCGCTATATTATCGCCACCGTTT 351230 30 100.0 36 .............................. TCTTTTTATGCATTTTTAAAATCTCAAGCGCGCTTT 351164 30 100.0 36 .............................. TCATTTACATTTATAAGGTCGTTTATTTCATTAAGG 351098 30 100.0 36 .............................. AGCTTTGCGACAAGATTTATCTCTTTTTGCTGCATA 351032 30 100.0 36 .............................. TAAAATAGCCCGCTCCTTTTTCCTTTTAATCCTTTG 350966 30 100.0 36 .............................. GCAAAGGTGCTGAAATATTGGAGAAATACACCGCAA 350900 30 100.0 34 .............................. TAGGGAGTTAAAAGTCCGTTTTTAAGTATATTTG 350836 30 96.7 36 .............................C AAGATATTAATGCAAGCGCGGTCGTGTGTTTTTTCT 350770 29 90.0 43 .................C.-.........C TGTATTAATTGTGTTTTCTTTACCAAGGCAGCATTTCTTGCAA 350698 30 100.0 36 .............................. AAAGGATTTTATCAGCTCTTTTAATATTCCTATTGT 350632 29 86.7 0 .......C.......-.........A...A | ========== ====== ====== ====== ============================== =========================================== ================== 72 30 99.6 36 ATTTTGCTATAACAAATTTTGTATTGAAAT # Left flank : CTTATGTTTTCTACGATATCGGCGACAAAGAAAGTGAAGTCGGAAAAAGGCGTGTGACAAAGGTTTTTAAGATATGCAAAAAATACTTTTTGCATCATCAGAAATCCGTTTTTAAAGGCGAAATAACACCTGCAAATTTTATAAAATTTGAAAGCGAAATCAAAAAAGTAACGGATAAAAACCTGGATACAATTACCATACTTAGGCTTTTTAGACAAACAGATGTAAAAGAGATAATAATCGGCGAAAATGATAGCGATAAAATATTTTTATAAGTTAAACCTGATTTTGTTTCAGTTTTTATTGTTTATTCACTTTTTTTGATTTTTCCAAATAAAATTTTGGTATAATTGCTCTGAAATATTTATTTTACGGATATTTTAAGCCGTTCTTTAACAACTCATTGTTAAATTAAAAACGGTTGGAAAATTTTCATAAAATGTAGGCTTCTATGAACTTTTCGCGGTTTAAAATAATTTTTAAACTGTTAAATGATATTT # Right flank : CAATGCTTTTCCAGCTTTTTCGCGCCTTCCGTGTCGCTATCAACGTTTATGCTTTATTCTCATCCATTTTTTGTCCTTAAATAGAAAAATATGCTAAAATAATAAAAAGGAGAATGAAAATGATATATGTCCCACCGACAGGCGCGCTTATATTTGTTCTGTTTTTGTTATTTATGTTTTTATTTACAAAATACTTTATTTCGGCTACAAAGCACTTTATCAGGTTTGGAAATTTTATTACCGATAAATTTACAGCGCCTTTATTCAGCGCTATTTTTAAATTTCTTGGTAGAAAATTTTTAAATTTTTGCAAATACTTGAAATTTAACGTTTTTAAATAATCGATTATTCTCATTTTTTACCTTTTTAATAATCGCCCGCACTCATTTTTTCATCATCTATTTTCATATCGCAATAGTTGAAATCTCTATAATTTTCTTTTGTAATTTCATCGAAAAATGGCGGAAATTCCTTTATGAGCTTAAACTTAAAGCTGCTGT # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTTGCTATAACAAATTTTGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:83.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.18 Confidence: HIGH] # Array family : NA //