Array 1 8786-12511 **** Predicted by CRISPRDetect 2.4 *** >NZ_PPBE01000078.1 Campylobacter concisus strain AAUH-35UCil4-a 1101797, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 8786 30 96.7 34 ......T....................... AATTTCTTGTCAAAATCTTTTCTTTCAGCGTCAG 8850 30 96.7 35 ......T....................... ACAAATTTAGTTAAGAAAGTCTTTTTTGGCTCAAA 8915 30 100.0 37 .............................. TACTGAGAAAAATAGATGAAAATGTAAATACCCTAAA 8982 30 100.0 36 .............................. CTTAATGAAGCCCTTAACTCTACGAGCAATCATAAA 9048 30 100.0 37 .............................. CTGCCTATCTCTCGCAAAGGTTGGGGGCTGGTATTAG 9115 30 100.0 34 .............................. TTACATAGGGCTTGGTATTTTCTTTTTGTATACG 9179 30 100.0 34 .............................. CATTTTAGGAAAGGTTAGAAAAATGACACTTGGT 9243 30 100.0 34 .............................. GTTTTTTGGTCTCTTTCGCTGCTTCTTTTGCTTT 9307 30 100.0 34 .............................. TCTGCATATTGTGTAGCCAGCGCTGCTTTTGGCG 9371 30 100.0 38 .............................. TGGCGTTGATATTGGCGTGCTTGGCGAGCAAGTGGCTT 9439 30 100.0 34 .............................. ATATCATCGCCACAAACAGTATGGACAATACTTG 9503 30 100.0 34 .............................. CCTTTGTTCTGCCTTGTTTTGGTAAGCCCCCTAA 9567 30 100.0 38 .............................. GTAAGCACGTAACCCTTAGCCCGTCGTCTGTCTTTTCA 9635 30 100.0 38 .............................. GAAAAATCACGATAGGGCATAAAATAATGCCTAAAACT 9703 30 100.0 37 .............................. AAATATGGTAGCGTGATAAATGCAGAGGGTGGCGAAA 9770 30 100.0 35 .............................. AATAAAAATTAAAAATGAAAGAATTTCAAAGAATA 9835 30 100.0 35 .............................. AGATCGATACGCCTTAAATCATAATCAGGCAATTT 9900 30 100.0 35 .............................. ACAGCGAAAAATACGCCATAAGCAACAAGAACAGC 9965 30 100.0 35 .............................. ATCGCACTGGCTACAAGTCCAGCCGTATTGTTATC 10030 30 100.0 37 .............................. GCTTTTTGATGTCGTTTGTCGTGAGGTAAATTCTATG 10097 30 100.0 35 .............................. CTCCTCTTTGTAATTTTCAAAAAAACTTAAAAGGC 10162 30 100.0 37 .............................. TGCTATTTGTTCGTAAAATTTCCACGCTGGCAAGCTC 10229 30 100.0 35 .............................. TCAGAAAGAAAAATATGGGAACCAGAAAAAGAAGA 10294 30 100.0 35 .............................. GCAACCTTTGATAACTTTTGGCTATCTCTTGGCTT 10359 30 100.0 37 .............................. AGCCTTTTTTTCAAAAAACAAATTTTAAATATCCAAA 10426 30 100.0 36 .............................. TAGATGCGGTGGCAAACCGCGAAAAAAATGGGGTTA 10492 30 100.0 34 .............................. CTGGCTTTTTTGAGGGACTAAGAAAAAATATAGC 10556 30 100.0 37 .............................. ACGGGTATAACAGCCTACCTAAACAAGGTGTAAAAAG 10623 30 100.0 37 .............................. AGTCGATTTTGTTTGGCTTAGCGTCGTAAAACTTGTC 10690 30 100.0 37 .............................. AAATACGCTAGCGTGATAAATGCAGAGGGTGGCGAAA 10757 30 100.0 38 .............................. TCGGGGTTGATGAATACGGCAACTTGATCAACCACTAC 10825 30 100.0 34 .............................. TAACGCATATTGAGTGCGGCGATGGGCAAAACGA 10889 30 100.0 38 .............................. AACGATAGTGAGGGCTTTATTTTAAGCGAAAAAACTGG 10957 30 100.0 38 .............................. ACTGACGGAAAAGAGAACAAGGACAACAGCACCGCCAA 11025 30 100.0 36 .............................. AGAAAAGAGTATTTAAATCAAGTTTTAGCCGATGGC 11091 30 100.0 36 .............................. TTGATAAAAAGAGTGCTGACTTTCAAAATCTAATGG 11157 30 100.0 35 .............................. ACGAGTGGATCACTTCAGCACAAAACCCAAGCGTT 11222 30 100.0 34 .............................. AAGGCGGTCTTGTAAGAAGTTCAGCTTCTGGCAA 11286 30 100.0 35 .............................. AGCCACGAAATAAAGACAGAGCAACAAGGATTTTA 11351 30 100.0 37 .............................. CAATAAACTACGCCAACTTTTCGTCCATATCTATCAG 11418 30 100.0 34 .............................. CTCTAAAATATAAGTTAGCTTTAGAGAAACTAGA 11482 30 100.0 37 .............................. TCTAGCTGTATATCTATATGTGCCCGCTTAGCCCATT 11549 30 100.0 33 .............................. AAACAAAAACAAGGTTATGAGCCAGTTATCTCA 11612 30 100.0 37 .............................. ATAGGGGTGACACCCTTGTCACTATGCAATGACACAT 11679 30 96.7 36 ..............T............... TTTTGTTGTATGCCTCTAGGCTGTTATTAGCTATCA 11745 30 100.0 36 .............................. CAAATCAAAGAAGGAGACAAAACGATGAATTACAAC 11811 30 100.0 38 .............................. TAAAGTCTAAAGCTGGCATATACTTCATAACGAAATTT 11879 30 100.0 37 .............................. GCTTTAAGCGTGTGGGATAAGCTCACAAGCGGAGATT 11946 30 100.0 35 .............................. TATCCTCTTTTAGCGCCAGCAGATTATAAAGATCG 12011 30 100.0 35 .............................. CCGCCATATTTAAAGGGCGGTTTTCGTTGGCTGTT 12076 30 100.0 37 .............................. GCTTATCGGTCTTTGCTACTTGTTCTTTGCTTAGACC 12143 30 100.0 37 .............................. TATCCCCAAAGGGCTTTAATAAGCCCCTCTTTATTTC 12210 30 100.0 36 .............................. TTAAGATACTTTTTCATAAAATTTAACCAATTTTAA 12276 30 100.0 40 .............................. GAGCTATATAAGAGCTAATAGAAGCTAGAGATTGGCTTTA 12346 30 100.0 40 .............................. CTGATGATGCCCTTAGGTTATATATTAGGACTGGTAACAA 12416 30 100.0 36 .............................. GGATTTGGCTTTGTTTCTACACCAGTCCCACCGCCA 12482 30 90.0 0 ..................T......T...T | ========== ====== ====== ====== ============================== ======================================== ================== 57 30 99.7 36 ATTAGAATTTACTCCGTTGGAGTTTGAAAC # Left flank : CGAGCTTGATCCTCGCATCGGCTTTTTGCACGAGCCAAACTACCGCGCGCTAAGCCTTCACCTCGACCTTGCGGAGACTTTTAAGCCGATCTTGGGCGATACGCTGATTTTTAATATGCTAAATAAAAAAGAGATCACCGCAAAGGACTTCCAAACGGACGCTGGCAGGATAAAATTTAGCAACGACGCCGTGCAAAAGATCGAGCTAAAGATGATCTCGCGCCTTTGCGAGACGCTCACGGTGGGCGGTAGGGAGCTAACGTGGAGGCAGGTGATCCGCCGCGAAGCAAATAAGCTTAAAAAGTGTATCTGCGAGGACGCGCCTTATAAGGCTTTGGGTGGGAGTGAAATCGCATTTTAATAAAGCGTTTTTTAAGATTTTAAAAAGCTTGAAATTTGGGGCTTTGCGTATTTAAACATGGCTAAAATTTAGTCAAATTTAAGGCGAAAAAATATAGACTTCTTGCACCTAAAGGCCTATAAATCAGCTTTTTGGTGCG # Right flank : TCTTAAAAAAAGATATCCTTAATCAAAAAGCTTAAAATTAAACTTTAAATTTAGTTTGATATATTAAATTATTAACATGAGTATTGATATTTTAAAATATTTCTAAAGAAGTTGGACCCAAATATGGGTCCGAATAAGGTAGTTATAGACCTTCAAAAGGGTTTGAAACTACGTCTTTGCGATCAATTATATAAGGTATGATGGCTGCGTGACGAGCTCTCTTGATTGCTTTTTCTACCATCTCTTGATATCTTTTTGATGTGCCAGTTAGGCGTCTTGGCATGATTTTAAATCTCTCTGACAAACAATACTTCAAAAGTGAAGTGTCTTTGTAGTCTATAAAATCAATCTTTGCTTCTGTAAATTTGCAATATTTGCGTGAATATTTTCTTTTTTCTGCCATTTCTTTATCCTTTAAAATTAAAACGGTATTTCGTTATCGCCTTCAAAATTGTCAGCGTCAACATTTATATCAGGGATTTTCTCTTCATAATACTCTT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTAGAATTTACTCCGTTGGAGTTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.60,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA //