Array 1 918-3125 **** Predicted by CRISPRDetect 2.4 *** >NZ_UYXC01000011.1 Anaerostipes caccae L1-92 isolate Anaerostipes caccae 81B4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================================================================================== ================== 918 30 100.0 35 .............................. TTGCAAAGAAGGTGGTCTGGCCGAACACAGTGTGA 983 30 100.0 35 .............................. TTTTGTAATTGTTCCATTTCCAAACTCTAGTGTTT 1048 30 100.0 35 .............................. TAGGAAGCTAAAGGACTGCCGCCGCGCAACTGAGC 1113 30 100.0 37 .............................. ACTGGTCATATGTAAATGTTTCTAATTCTTTGTGATC 1180 30 100.0 36 .............................. TGAAAAGAGGGCGATCACTCGCCCTCCGTGTCTCCC 1246 30 100.0 36 .............................. TTTTATTTTTCCAATCCTTTATTTTATTTGCATAGA 1312 30 100.0 36 .............................. TAACAAAATTTTCTATTATCATCCGGTCCATATTCA 1378 30 100.0 36 .............................. GCACGATAGGGATGTAATACTCTGTGATAAATTCTA 1444 30 100.0 36 .............................. GCGCATACGGCTTACCTTTTATATCAATCAACTGCA 1510 30 100.0 37 .............................. TATCTCGCTGAGTTCTATCTCTTCGCCTTGCTCTATG 1577 30 100.0 36 .............................. GGGGGAGAGGTAACAAAAGAAGCATTTAACAAGATG 1643 30 100.0 37 .............................. ACCCGTCGGATTCGCCGGATTGGAACCGTGATTGAGG 1710 30 96.7 35 ..T........................... TCTTTTGTTGCTGCTATCACTTTTGTCAGTTCATC 1775 30 100.0 36 .............................. GAAAATAAAAGAATAATCGTGAGTGAAAGATTTAGA 1841 30 100.0 36 .............................. AACAAGTTGTCGCCGGCGGAATTTGCTGCACCGCTG 1907 30 100.0 35 .............................. CAGTATTGCTGGCCCCTGCGGGTGTCGTATCCATG 1972 30 100.0 36 .............................. TTTCTCAGGAAAAGTACCTTTATTTCTGTCGACAAA 2038 30 100.0 37 .............................. TATAGTATATAATAGTGTACAAAGGGGTGATGCAATG 2105 30 100.0 34 .............................. CTATGTAGACGAATATAAGATTGTATTGTTCCCA 2169 30 100.0 35 .............................. AAATGATTTCAAGGTATATCAGATAGAAGCAACTG 2234 30 100.0 35 .............................. GTCAGCTTTCCTGTCGCAAAATCTACCTCATACTC 2299 30 100.0 36 .............................. AAATTAATTTGTGTTTCTATTGAGATGCTATCTTTT 2365 30 100.0 37 .............................. AAACTTGTGACGCCGATCAGCCTGCAGCAGGGATATG 2432 30 100.0 37 .............................. GAAGGACCTCGGGATCTTAGATGACTTCGGGGCCCTG 2499 30 100.0 36 .............................. GAAAGGGATCGACTGCATCGAGTATAAGAACGGCCA 2565 30 100.0 37 .............................. AAGTTTTCAGAGGGTGACGTTGCAATAATTTGAAAGC 2632 30 100.0 37 .............................. GCCAGAGACGAGACGGCCCCACGGCTTACGGAGATGA 2699 30 100.0 37 .............................. GCTTACAAGATCCTCTGCTGCCGCATTTGCATTATTC 2766 30 96.7 38 .................T............ AGTGGTAGTTTAAATCCATCTATTCAAGATCTAAATGT 2834 30 100.0 38 .............................. ATATGACTTTGAAGGTGCTACAGTTCAGCTTAGGATTG 2902 30 93.3 100 ........................C..A.. ATCACTGTTTTTTGCAATTCCAACCATTTTTAAAGAGTAATAATAGAACCCATTGGAGTCTAAAGATTTCTTTTACATATTTAATGTGGAAACAAGAACG 3032 30 86.7 34 G.GA.............T............ GTTTCAGTACTAGAAGTACCGATTAATGGTTTTG 3096 29 83.3 0 ..T..............-.T..G......T | C [3120] ========== ====== ====== ====== ============================== ==================================================================================================== ================== 33 30 98.7 38 ATCTTAATAGAAACATAGTGGAATTTAGAG # Left flank : TACGGCTATTTTTGTGGCATGGGGCGATTATCTCGCCCCTTTATCTCTGTTTCGGTGAGGTTGGTTGGCATTCTGTCTGTCAGCCTTTTCCTGATATCGCTGTAACTTTTCGTGCATTGATTCGGCTTTGGGAGTGGCTTTCTCTCCATAGACTTGCGTCCGTTTTACCACTCTGAAAGTGGTAAAATCACTATGCAGGTTGATGAAGAATTAAAAGGTCAAATTCATACAGAAATGATGAAAGCAATCTTGAAATATGAAATCAGAGTGAAGTAATCATATTACATGAAAAAAACGGGAGATACACAGACGTTTGTGCTATCTCCCATGTTATTTTTTGTGTCATATCAAGGCTCATTCAATCGTGGTAAATTCGTGGTAAAATGAATGGTTTTCTATATTTCAAAATGCTTAAAGGTATAGTGTTTATGCGGATAATCGAAAATTAGATATAAAATTTATCTTCTAATTTATTTGTGATAATATCTCTAATATTTTCC # Right flank : TTGTCGACGTTATGCCAGAATTCATTGCAGATTAAGGCCTTAATAAAACTGTATGGTTACTCTGTCAAGAGTTTTGTATAAACATAAAAATTATATTGATTCTAATTAATTACAGAAAAACACAGCATTTGACAATCAATCTCATCAAAAGCTGTGTTGTTTTTTATGTTATCTACTCTTTCCCATCCCAACAATAAGTACAGAGTTTCTTAGGATCCAATCCCACAGACTCAATCATATCATCCAGCCTGTGATACCGGAGCGATGTGAAATTCAGCTGCTTACAGATTTCATCGATCATACCCTGATATTCCGGAGAGTCCGGATTTGAAAACTTCTCCAGATGTACATTCTTGTAATCTCCGCTGATCTGTTCAATGATCCGGCGTGTGATCAGATCCATTTCAGAAGTAGAGCGTGAGAAGTTTAAATATTTACATCCATATAAAATCGGCGGACAAGCCGGGCGGACGTGTACTTCTTTTGCACCGCTCTGATAG # Questionable array : NO Score: 3.03 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:-0.16, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCTTAATAGAAACATAGTGGAATTTAGAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [83.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA // Array 1 48995-49551 **** Predicted by CRISPRDetect 2.4 *** >NZ_UYXC01000021.1 Anaerostipes caccae L1-92 isolate Anaerostipes caccae 81B4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 48995 30 100.0 37 .............................. ATGCCACCTGGAAAGATAAAATAATGTAAGTATTTCC 49062 30 100.0 36 .............................. TACGCAAGGATGTCTAAGAGCGGTTCTTGCAGTTCA 49128 30 100.0 36 .............................. ACTGTAAAATCCTGTAGCACAGAAACGTCAAATTCA 49194 30 100.0 35 .............................. TACTATTTCCAAACCGGCTTTCAACTGGTTGACCC 49259 30 100.0 36 .............................. ATGGCTGGACCAGACGGTACAGGACATCTTAGAACT 49325 30 100.0 36 .............................. TAGTGATATCATAGGCGGTATAATATAGGTTCGGAT 49391 30 100.0 35 .............................. TTACACCCTTAAATTTTATAGTTTCTGAACTTTTT 49456 30 100.0 36 .............................. TCAACTACGAACTTGCCTTCAGGCGGCCGGAACTGC 49522 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 9 30 100.0 36 GATAAACAGTAACAAGAGTTGTATTGAAAT # Left flank : AAAACTATCGTTGGACGGTTCCATTTGTTTGGTGGATACTTATCCAGTAGATATTACGTCCATTTTGACCAGTTTGGAGGCCTTGCATTCGAAGAGATGTTAGTTTTTCTTCTTTCAGAAAAGGCTCGGAGGTGGTGTGCAAAGCACAGTGAGGCCGCCCCCGCGCCAGCGAGTTCCGAACGGGCCACCGCAGAGACTTTACTGAAAGTTAGAAAATCTTACATCTCTGAGACAGCAAGCCGGAAAACTGGTCAAAATGTCATACCAAAGGGCACACCGTATTTTATACTCTTCGGGTGGCGCGCTCTGCGCGATAAGGTATACTGATTTCCCAACCTATAAAATTGATAATTGCATACAAACCGCGGGAAATAGCCATTTGAAGGTGTATTGGAGAAAAATGTGAGAAAATTGATGACGGTTGGGAAAAATTTAGAGAAACGTTGATTTTATCAGGAAAACTGGCTATAATGAAATGGAAGAATGGCTTAAAAGCGTTA # Right flank : TTTGATTGCAAGATCAAACCGTTTCATTACAGCCAGATAAACAGTAACAGAAATAAGATATACCCTGATAGTTAGGCACAGAAAAGCAGTCAATGTTTAACTGCCAGGGTATTTTTCTGTATGTCATGACATTTTTACCAGTTCTGCGGCTTGCTGTCTCAGGAAGGTAAGATTTTCCAACTTTCAGCAAGGTCTCTCCAGCGGCCCGTTCGAAGGAACTTAATGAGCAGGAGCCGCAGGCGAAGTGCAAATTTGGTGAATCGAACCTCCCCTCCTTGCCTCTGAACCTTTTCTGAAAGAAGTAAACGAATCTTCCTTCTAATGCAATGCCTCCGAACTGGTAAAAATGGACATAATGTCTGATGGATAAGTATTCTCTGAACAAAAAAAGCTATCCAACGATCGTTTGATAAGTATTTATCCAGTAGATATTACGTCCATTTTCTACATGATTTCCGTTCAGCTCTTAGAATGTCTCACTCCAATCATGTGGAAAATGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATAAACAGTAACAAGAGTTGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.10,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [66.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0 Confidence: HIGH] # Array family : NA // Array 1 169909-169160 **** Predicted by CRISPRDetect 2.4 *** >NZ_UYXC01000001.1 Anaerostipes caccae L1-92 isolate Anaerostipes caccae 81B4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 169908 30 100.0 34 .............................. TGAAACAAATTGATCAGAATGGCGAAAATGTTGG 169844 30 100.0 36 .............................. CATGGAAGATCTTCAAATTCTTTCTCCGGTACATTC 169778 30 100.0 36 .............................. GCTGTATGGTCCGATCATTATGAATGGATTCACATT 169712 30 100.0 36 .............................. TTTGCTGAATCAATGTAAGCGATGGAGTCTTGAGAA 169646 30 100.0 37 .............................. GAAGTGAAAAGTTCATATGCATCTTTTGGGTCTTCGA 169579 30 100.0 34 .............................. TACATACGAGACCATAATTCGATGTCTCGTGCCA 169515 30 100.0 36 .............................. ATGATTTCCATTTTAGACTGTAACCTCCCGATCGCA 169449 30 100.0 34 .............................. AGCCATACAAGCAAATCATTCTTTAGTAGCTTTT 169385 30 100.0 36 .............................. GCTTCCATCCGGGCCTCTTTCTCCCGGCGAACTTTT 169319 30 100.0 35 .............................. TTTCCTGAGTGTCATTATCTATAACAATCGTATAA 169254 30 90.0 35 ...T..T....T.................. TCTGCAGTTGCATAAGGATCATCTTTTGCCACATA 169189 30 86.7 0 ...................CA..C....G. | ========== ====== ====== ====== ============================== ===================================== ================== 12 30 98.1 35 GATAAACAAAAACATTAGATGTATTGAAAT # Left flank : GGGCACACCGTGTTTTATACCCTTCGGGTGGACGCGCTTTGCGCGATAAGGTATGACATTTTCCACATGATTTTCGTTCGGCCCTTAGAATGCCTCACTCCAATCATATGGAAAATGGACGTAATGTCCGTTGGAGAAGGCCCGCTGTCAAAAAAGGTGCCGCTTTTCGAAAGTTATTTACCGCTATTGGAGGAGCGCATTTCAAAAGCACGACGGAAATAGTGGTGAATAACTCATAATATATGGGGAGATCAGTGGATCGGCCTGCTGAAGATGCTGTAAATCGAGCCTTGAGATTGAGTTTAATTCCATAAAAAGGCAGGCGTTTTCCCAACCTTGTTTTTATTAGAAGTGGAAGAAAGATTGGTTTTATGCGGGTTAGGAGAAGTTATGGAAGAAAATTGAAATTTTAGAGGGGAGGTTGGGAAAATATTTAAAAAACGTTGAAAAATAAGGGTTTATAGGGTATCATGAAAAATAGAAATGGCTTATATGCGTTG # Right flank : TCTTTTCTATTACATAAATTTTCTACAATTTTATCTTTAAGATATAAGTGAAGGATTTTTTCTGGAATTTGTTGAGAAAACAGGATGATTGTAGTAAAATAGTAGATAGAATGGTTAAGGATTTGGGGATTCAGATATAAATATGATGAATAAGAATGTCGTACAGAGATATGGGGACCAATCCGCTTCAAAATGGGATAAGAAAAACAATAGTAAATTCATTAGAATAGCTGACGATAGCTGTTCTTACAAGTGTGCTTTGCATAGATATAATTAGACGGAAGTTGTAAATATACAATTTCTGTCTTTTTTTGTGAATAAGGGGGTTGAGGGGAAGTTCAACAAAATGGGGCATAGTATTTATAACTTAATTCTTAGTAATGTAGAAATGAATTTACATGGAAAATGTAAATATTAAACAAAAAGGAGAAACAGCTATTATAACAACGCTGAGTATTGATTATGAGATTTCTAGTATTTTATCGAAATGAAACACCTTT # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:0, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATAAACAAAAACATTAGATGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.91 Confidence: HIGH] # Array family : NA // Array 2 179850-179496 **** Predicted by CRISPRDetect 2.4 *** >NZ_UYXC01000001.1 Anaerostipes caccae L1-92 isolate Anaerostipes caccae 81B4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 179849 30 96.7 36 ...T.......................... GAGCGTTTATCTCAAACGCTGCATTGTGGGCCATTT 179783 30 100.0 36 .............................. TTGAGAAGCCGGGTAGGCTAATTTTGCGATGATCTG 179717 30 100.0 34 .............................. AACCAGTTGGTCCCAAGGATCTGTGCATTCTGCT 179653 30 100.0 32 .............................. AGTCTATTTCCTCCATCTTGTCCTCCTCTCTC 179591 30 96.7 36 ...................C.......... CCCATTCCGTTTAATGCATCGAAAGCGGGATTGCCT 179525 30 86.7 0 ......C................A.A..C. | ========== ====== ====== ====== ============================== ==================================== ================== 6 30 96.7 35 GATAAATAAAAACAAGAGTTGTATTGAAAT # Left flank : GCAAAAGCCAGGCGGTGGTTTTGATTGGGGTGACTTATCAGCAAAGAGGACTGAATGAGTGCTGTGGTTGGTGTAATCAGACAAACTGCCAGGGCTGCAGGGAGAACCAGAGCGTCTGTGTATTTGATCCGGTGGATCTGGGAATCGCATTGGGCTCGGCAGTCAGTGTGGCATCCTTAAACCACGTGGACAATCGGATCATGTTTTCTGTTGGAAAAGGAGCACTATCCTTGGGGATGCTGGGACCGGAAGTAAAGATAATCCTTGGAATTCCGTTGGCTGCGGCGGGAAAAGCGCCATATTTTGACCGAAAATAACGATGTTGTTTTCCCAACCGGCTAAATAAAGAAAGGTCTGAAACGCTGATTTTATCGGGGCTGTAAAGGATTTTTGGGATTAATTTTAAAAAGAGACGGCCGGTTGGGGAAAAAGCGGGAAAACGTTGAATATATCTAGGTTTAGAGATATAATGGAAATTGAAGAATGGCTTAAAAACGTTG # Right flank : TCATATTTATAAATCATTAAGGCTATAGAAATTGAATTATAAATTATTAATTTTGATTTGAATTGTTTGAAAGTACTATGAAATGTTGTATTATTTTCAAAAATATAGTAAAATAGAACAATAGAGTGGTTTGTGTATAAAAGCTACTAATGAATCATTCCCTCCAGGGCAGTCGTTACGATAGGTACTATCAGCATGTATACGATACGAGGGTGCATACAAAAGAAAGGGGTGGGGCAGTGGATTTGAAAGTTTTTGAAATTCGGCTAAAAGTATATCTGTTAGAAGATATACCGGTAGAAGCAGTTCAAAAGAAGACAGCCGCACTAATTGACATTTGTCTGAGCAGAGACGAAGCACTTCTGAAATTTCATGAGACGAATCAATTTAAGAATTATTCTTTCGGAAATCCATATCCATTGGAAAAGGACAAAATTTATAAAAAGGATAAGGTGTATGTCATAACAATCCGCACCATTGATCCACAGCTTGCAAAAGTA # Questionable array : NO Score: 6.10 # Score Detail : 1:0, 2:0, 3:3, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATAAATAAAAACAAGAGTTGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [85.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.91 Confidence: HIGH] # Array family : NA // Array 3 243247-242820 **** Predicted by CRISPRDetect 2.4 *** >NZ_UYXC01000001.1 Anaerostipes caccae L1-92 isolate Anaerostipes caccae 81B4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 243246 30 96.7 37 ...T.......................... ACGCCCTATGCCCGCCGTTTGTATTTCCATCCTGAGT 243179 30 96.7 36 ...T.......................... AAGGTATCAAAGCCAGGATCGCATACCAGAGTATTT 243113 30 93.3 37 ..............G.....A......... TGACTTCCGCCTTTTACACGGCAGTCAAACCCTCCCG 243046 30 90.0 36 .................AC.A......... TGAAGAAGCTGAGTGCACCTTGCCCAGTTGAGATAC A [243039] 242979 30 100.0 36 .............................. AGCCAAATGATCCGTTCATATACCCCGTTGTCATCT 242913 30 90.0 33 ...T............C......C...... TATGGTTTTGACCCATCAAATTTGACACTTCTA 242850 30 70.0 0 ...............AA...A.T..AGGCA | C [242847] ========== ====== ====== ====== ============================== ===================================== ================== 7 30 91.0 36 GATAAATAAAAACAAGTGTTGTATTGAAAT # Left flank : GGGATTACGACGATGAAACCATACAAAAGTGGCTGGATAAATTCTACTGGCGGTTCTTCAGCCAGCAGTTTAAGCGCTCCTGCCTGCCGGACGGGCCGAAGGTGGGAAGTGTAGCAGTGTCTCCAAGAGGGGATTTGAGAATGCCGAGCGATGCCAGCGTGAATATCTGGCAGAAGTCATAGATAAGGATTGGAGCTGTGCAGAGTTTTGCATGGCTCCTTTTTTGTTATCAGATAAAATCTTGCTATGGAATGGAAAGATCTCCAGGCAGGTTGGAAAATCGCATTTAGTGCACAAAGTGGGTAAGTCTCTCAAAGAGGAGGATTTTTCCCAAGCTCTAAAAGCAGATGAATGCCGGAAAGCCGCATAGAATAAGGGAGGGAAGCTATTTTGGAAAAGATAAGAGAAAAATTTATGGCGGTTGGGAAAAAATTGAGAAAACGTTGATTTTATGCGGAAAGACGATTATAATGAAAACAAAGAATGGCGGAAAAACGTTG # Right flank : TACAGAAAACAAACAGATTTGTGCTGTTGTTGTAATATGATTCATTTAATGAATGAAAAGAATTCTGTGGAAATATCCATACACAGAGTTCTTGTTTTTTTTGTCTTTATTTCTGTACAATCTTTATTAAGTTTTATTTTCTTTTATTTATACTTGCATAATGAAAGTTAATATGATAATATACAAGTACAAAGTAAAAGATAATAAAAGAAAACAAAATGGAGGAGTCAGAAATGAAGTTAAGTGCAGATCAAATAGCAGGCATGGTAGACCACACAAATCTCAAAGCCTTTGCCGATGAAGCAATGTTCGAAAAATTATGCGGCGAAGCCAGAGAATATGGTTTTAAGATGGTAGCCATCAATCCTGCACAGACAGAGCGGTGCAAACGCCTTTTGGAAGGATGTCCGGTTCACGTAGGGGCAGCCATAGGATTTCCGCTGGGACAGACAACACTGGAATGTAAAGTATTTGAGACAAAGGATGCCATCGAAAAAGGT # Questionable array : NO Score: 3.65 # Score Detail : 1:0, 2:0, 3:3, 4:0.55, 5:-1.5, 6:0.25, 7:0.01, 8:1, 9:0.34, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATAAATAAAAACAAGTGTTGTATTGAAAT # Alternate repeat : GATTAATAAAAACAAGTGTTGTATTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [13-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA // Array 1 67648-68197 **** Predicted by CRISPRDetect 2.4 *** >NZ_UYXC01000005.1 Anaerostipes caccae L1-92 isolate Anaerostipes caccae 81B4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 67648 30 100.0 36 .............................. TGCTGGCGGTTTCCGGAGTTGTGTCGAGCCGACCAA 67714 30 100.0 35 .............................. TGGTAAATCAGTCCGACCTGCCGCCGTCTGAAAAT 67779 30 100.0 34 .............................. TCCCGTACATCGTGCAGGACCTTTCCATCGCACA 67843 30 100.0 35 .............................. ATCACAAGCTTATGAATGACTTCGTTTCCATGCCG 67908 30 100.0 34 .............................. TCCACTATGTCGGAGCTCTTGGAGGAGCAAAAGC 67972 30 100.0 36 .............................. TGCGCTCGGATATAAACTAGACTATAATTTTATAAA 68038 30 100.0 36 .............................. TATTGTTTCAGTATTTTTACAATTTGGTGTAGATCC 68104 30 96.7 35 ...T.......................... TAAAGTGGATTGTGAGTACCGCCGGAACAGTCCGG 68169 29 86.7 0 .......................-CA.G.. | ========== ====== ====== ====== ============================== ==================================== ================== 9 30 98.2 35 GATAAATAAAAACAAGAGTTGTATTGAAAT # Left flank : TGGCTTTGGGCTGATTTATGTGATTCATCATGTTGAAAAACAAAAGATTTATTACGAATTTGGAAAGGAACACTGCTTTTTTGTAGTTGTGACATAAGTGAGGAGGTAAAGAAATGCTGCCGAATGATCCGGTGATACTGTTAAGCTACATCAACACACAGTTAAGGGACTATTATGACAGTTTCGAGGAACTGTGCAAGAGTCTGTGTGTGGACTCAGGAGAGATCAGCACAAAACTTTCGGGTATCGGTTATGAATATCATCCTGAGACAAATCAATTTAGATAGTGGAGAATAAGGGCTGCCGGATGGGCAGCTTTTATTGGTTTTCCCAACCTCAAAAAGAGACGAAATGCCGGGAGACCGCTTAAAATGGCGGTTGGCAGCCGATTTGAAAGGAAATGCCGGAAAAACAGAAACGGTTGGGAAAAATTCAGAGAAACGTTGAATTTATCAGGGAAAATGACTATAATGGAAATAAGGAATGGCGGAAATACGTTG # Right flank : TTTATATTTACAAACAATACAAATCATGAAAAGGCATTGAGCTTCTTTAATTTCACAAGAAACTCAATGCCTAAGTTTTTACTTTTTCATATCCTGTCGATTTGACTCATTTATAAAAACTGCTCAACAAACTCAACCGGAAGCATTGTCCGTTCCGCAGTTTCTTCTCCGGAGAGTCCCTGTGACAAGAAACGTTTTGCAACACTTTCCATGCTCTCTGCCACTTCTACGATATATTTGTCATAATCATAAAACCGCATAACACGCTGGCCCCATGGATATTCTTTGATACCATGGAGAAATTCAATCCCTTCCAGAGCTTTCAGCTTATCTTCCCAGGCGTCCAAATCTTCCACTTCAAAATAAAGCTGAAAATTATCAGGTTTCTCCTGGGGCTCCAGTTTCACTCCGACCAATTCTTCGTAGTTAGACTGCAGAGACAGGCCGTTTTGAAAAGAAACATGAACCCCCAGATCCATCTCTACCGTTTGTTCCATTAC # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:0, 3:3, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATAAATAAAAACAAGAGTTGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.65%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.27 Confidence: HIGH] # Array family : NA // Array 1 21990-21699 **** Predicted by CRISPRDetect 2.4 *** >NZ_UYXC01000024.1 Anaerostipes caccae L1-92 isolate Anaerostipes caccae 81B4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 21989 30 100.0 36 .............................. AGAGATCCTGAGATGTCCACCTTATCGGTGAACAGG 21923 30 100.0 37 .............................. TTGGAAAATGGACAAAAAAGAAGCAAATGCGATCGCT 21856 30 100.0 35 .............................. GGAAATTTGTTGAGTAACTGGATGTTACGTTTATT 21791 30 100.0 34 .............................. TTGATTGCAAGATCAAACCGTTTCATCACAGCCA 21727 29 90.0 0 ................T.....T..-.... | ========== ====== ====== ====== ============================== ===================================== ================== 5 30 98.0 36 GATAAACAGTAACAAGAGTTGTATTGAAAT # Left flank : TGCCACCTTTCGAAAGTTATTTGCCACCATTGGAGGAGCGCATTTCATGAGCGTGACGGAAATAGTGTGAATAACTCATGACATTTTCCACACGATTTCCGTTCGGCTCTTAGAATGCCTCTCTCCAATCGTGTAGAAAATGGACATATTATCTGCTGGAGCAGGCTGCTTAGAAATCAAAGGTGCCGCCTGCAAAAGTTTTTCTCCATTGTCGGAAGGAGGCCTTTCCAGAGCCGACTGGAGATAATGGAGAAAAACTCATACCCAAAGGGCACACCGTATTTCATACCCTTCGGGTGGCACACTCTGAGCGATAAGGTATACTGATTTCCCAACCGATAAAATTGATAATTGCATATAAACCACGGGAAATAGCCGTTTGAAGGTGTATTGGAGAAAAATGTGAAAAAATTGATGATGGTTGGGAAAAATTTAGAGAAACGTTGATTTTATCAGGAAAACTGGCTATAATGAAATGGAAAAATGGCTTAAAAGCGTTG # Right flank : ATTTCCTTAACGCCTGACCTCAATTATATTCTTAGAAAACAATAATTATCCAAAAAAATGACAGACAAATGATTGCTGTCTTTTTTATATTTAGAGGTCTTAGATTAAACTATAAAAATATAGTCAACATGTCTTTCCTATACAAAAGTCAAGAGTTGAAAAAATAGGGTTTTTGGCATATAATTTCTTATTGTAAGAGCTTAAGAACTTTTTTACAAATAAGGAGGAGAGAATGAGAAAGAATGTTTTAGTTAGTAGGGTAACGGTATTGTTGTTAAGCTTTATTTTGATATTTTCATGTCAAAATATAGTAGAAGCAAAGGCAAAAGTTAAAATTTCAAATTCAAAAATCACACTTTGTAAAGGACAATCAAAAACACTGAAAGTAAAAGGGACAAAGAAGAAACCTAAGTGGTCCAGCAGTAAAAAATCAGTAGCTTCAGTTTCTAAGAAAGGAAAAATAACTGCAAAGAAAAAGGGTACAGCGACCATTACAGCAA # Questionable array : NO Score: 5.96 # Score Detail : 1:0, 2:0, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATAAACAGTAACAAGAGTTGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA // Array 2 33995-33252 **** Predicted by CRISPRDetect 2.4 *** >NZ_UYXC01000024.1 Anaerostipes caccae L1-92 isolate Anaerostipes caccae 81B4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 33994 30 100.0 34 .............................. CCAGTATCATATTTGTGTAGGTCATTTTTTTCAA 33930 30 100.0 35 .............................. ATCGGGAACAGGAATCCGTATGCCTGCAAGGCTCC 33865 30 100.0 35 .............................. AGCTGAACGACCGAAAACTTGAATCTTTGATTTCC 33800 30 100.0 34 .............................. TCGTCTGCGACAAGAACGCACATAAACAAGACAA 33736 30 100.0 34 .............................. TTCTTAACATTCTTTTCATTCTTGTTTGTGTGTT 33672 30 100.0 36 .............................. TTACTCTTTATCGGGTTTTTTGGGTTACAGTCGGTT 33606 30 90.0 34 ........T.......GA............ GTAACTACCGTTCCATGTATCCTTTGCTTGACCA 33542 30 93.3 35 ........T.......G............. AATCGTCCATGTTACGAACTGATGCTCTTTTAACT 33477 30 90.0 35 ........TC......G............. CATCCAACTCTAGTTAGCTGTTCTGCTACATGAGA 33412 30 90.0 35 ........TC......G............. TAGCAACGGCAAACAAGCTATAGCGAAAAAACAAC 33347 30 90.0 36 ........TC...................A TGGGTAGTGTGCTGGTCTATGGCAGTAAAGTTCTCA 33281 30 86.7 0 ...............A..........T.TA | ========== ====== ====== ====== ============================== ==================================== ================== 12 30 95.0 35 GATAAACAGTAACAAGAGTTGTATTGAAAT # Left flank : CTGCTGGTGAGGCCGTACAGGGAAAGCAAGAAGTTAAAGGTTGATTTGAAAGAGGTAACAGGAACAAGATAATATTGGAAATAGAGAGGTCTGCACCTGGTGTGCAGACCTGCATTAGAAAGGAGATTTCTATGGGAACAATAGCAGTAGGTTTGGCTGTCTTTGGCATTGTCAGTTTGATCGTCAGAAGTATGATGAAGGATAAGAGACAGGGAAAATCGATCCAGTGCGGGAATGACTGCAAACATTGCGGCGGGCACTGCGGTCATTGAGAAATGGAGAGTTGTCTCAGCTGACTGCATTGAGGCTGGCTGATAATGATTGGATTTCCCAACCACAAATATTTAAATAGTATGGCAGAACCGCAGAAAATGGTGGTTTACAGGCGATTTGAAAGAAAAAACAGGAAAAATGAAGATGGTTGGAAAAAAATAAAGGAAACGTTGATTTTATCAGGGAAACTGGCTATAATAAAAAATAGAAATGGCTTAAAAACGAGG # Right flank : AAGATCTTCTTTCTATGTCCAGGAGACAGAAATTATAATTTCTGCCTTCTATTTTTTTGCCTTCTGTCTGCTGAACCACACCAGTCCACAAGCTGCCGTTTTTATGTTATGATAAAAGAGCAAAACACAAAGGAGGAACTATGAGATTTGGTTACGAAATCCCGGATTCTTTTTGGAGCCTGTTCCGTTCTGTAAACCGGGATCATTACATAGAAGCGCTGCTGAAAATCAGTGAAGAATATGAATATAACAACTACTTTCTGAGCCGGGAGGTCTGTATTCAGGTCCTAAGCGACTGGAATGCGGACAAGCGCATCTGGCTCCAGCGGGAAGAGTTTGAATCAGAACTGGATGTACTGGAGACTCCCCCAAACCGGATACTAAACTGGCTGATCCGGACCGGCTGGCTGAAAAAACTGGATGACTTTTCTACGCTGACATCCAATATTGTCATTCCTGATTACGCGGCCGTTTTTCTCGATGCTTTTGAACAGCTCGTG # Questionable array : NO Score: 5.89 # Score Detail : 1:0, 2:0, 3:3, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.88, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATAAACAGTAACAAGAGTTGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA //