Array 1 12205-13957 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCNA010000051.1 Coprococcus catus strain DFI.3.20 EOGFDFHN_51, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 12205 30 100.0 37 .............................. ACGCATCAAGCGTCACCATCGTGACTGCAGGAGGCCT 12272 30 100.0 37 .............................. AAGACGAAAAAAGCTAACAGCAAAAAGAAAACAGACA 12339 30 100.0 38 .............................. GATGGGGAGAGAGCAAGCTGGCATCCAAGTATCATAAC 12407 30 100.0 35 .............................. TTGATACAGGGGAACGTGTGGAGATCTGGGAGGTC 12472 30 100.0 36 .............................. GGCATTATCAGCGGCAGTTTTTGCATCATTGGCATC 12538 30 100.0 38 .............................. GAATCAGGAGATCCGGACGGCCATTGATAACCTGACAG 12606 30 100.0 35 .............................. ATTTGTTACTTGTAAATTGTCTATAAGTGTCTTCC 12671 30 100.0 38 .............................. CCAAGACCCTGAATCAATGAAGCAGCAAAAGACGTTGC 12739 30 100.0 39 .............................. CATATTTCTCCAGAGCGTCAATCTCTGACTCTCCCTCCA 12808 30 100.0 36 .............................. GACTATAGCCGTTTAGTTGTACCATAACCGCTTTTG 12874 30 100.0 36 .............................. TACATAAAAGGCATGCATATCATTTTTTTTGATGCA 12940 30 100.0 37 .............................. CTCACTTCGCATTAATTCGGGGATTAATTGCTTTTTA 13007 30 100.0 36 .............................. TTTTTTGTCCTCCTTATGCCGCTTTTTTCCTGATTG 13073 30 100.0 36 .............................. TATACCGCGAAGACAATCTACGCGGCACTTTGCACC 13139 30 100.0 36 .............................. CTACAACGTCCGATAAGCGAAGTAAAACAGAATATA 13205 30 100.0 35 .............................. GTGGAGATGCAAAAGACATCTGGCTCGCAGTCAGA 13270 30 100.0 37 .............................. CTAAACAAGTCATGAAGCAATGCATCTCTTAACTCTG 13337 30 100.0 36 .............................. TTCGTCTCACTCCTTATCATCGTATATCTTCGGTAC 13403 30 100.0 36 .............................. CACTCCATTGCGGCCGCTTCCAGTTTCTTGTATTCC 13469 30 100.0 35 .............................. GAATCTGTTCTTCCTCTTCCGCAAACGTCAATTCG 13534 30 100.0 36 .............................. TGATTATTTATCCTCACTTTCTTTTTTCGCTCTGCC 13600 30 100.0 37 .............................. ATGGTTAGAGGACGATGACGATGCATGGATGGAAGGG 13667 30 100.0 35 .............................. ATGCTTATCTGAAGACACTGCCTATCTTTGAGGGA 13732 30 100.0 35 .............................. GTCATTGTTCAGTGTTCGGAGAATGAAAGATTGAC 13797 30 96.7 35 ...............T.............. TTACGAGTGGTCTTACCATGAAGAATGAACATGCA 13862 30 96.7 36 ...............T.............. GATATTTCTCCGGATTCTTCTCCACGGCTTCACGGT 13928 30 93.3 0 ...............T............G. | ========== ====== ====== ====== ============================== ======================================= ================== 27 30 99.5 36 GTATTAATAGAATCAGATTGGAATTTAAAG # Left flank : AGCGAAGCAGGACAGAAACGTTGGTCACGTATCTTTAAAATTTGCAAGAAATATTTGTCACATATACAAAATTCAGTTTTTGAAGGTGAAATATCGAAACCTCAGCTGATGCAGTTGAAAAAGGAAATGCAACCGTATATAAATGAAGAGCTTGATTCAATTATTATTTTTAAAAGCAGGCAGGAAAAATGGCTGGATAAAGAATTTTGGGCAAAAGAGGATGATAAAACAAGTTTTATGTTATAATAGATGGTGAAAAAGATGTCTGTATGGATTTTCTTCAATGGGCATCGGAGAGAGTGAGATGAAGGTTAAGGTTTTTAATTGTCGACCTGTAATAATGCAAAAAGTGCAGGGGGTCGACAGAGGCAAAAATGCAGATAGAATCAGGCAACTGGAAATAATGAAGTTTAAGAGGTTAAGGCATACAGATGTTTATTTCTTAGGTCGACAGAAATAAGTGTTGTAACCTGTGGTTTTAAAGGTGTCTTTGAACACGG # Right flank : GATTATTTAATAATATAGGGAGGGTACATACATTTTGAGAAAATGTACTATCTGAGATGATTTTTTATGATGTATTATGTAGAAGGCTAATATATATATAAATTAATGGGATGTAGATATAAAATTTAGAAAAAGGTTGCTAGATAGAAGGAATGCAGTGTATTATAGAAGAAATGGCATATTATTTTAGATTTAGTATTTGAAAATGATGTAATGGCATTAAACAGGTTATTCCCTGTCGGTTCAGACAGAAAATTTTAATATAGAATGATAAAAATAACTAGGAGGCAAGATGGCAGCTAAAGAGTATTACAAAATGTATGACTCTTTCTTGCAGAGTTTATCGGATGGTGAAGCGCATCTGTATTAAGATGTAAAAAAGAAAGTGATAGAAGATTTTAAGCTGACAGATACAGCATCTGGCAGAGCTAATGATTGAACATGATTTTGGTGTCAGCACAGAGTATACCTATCGGATCAAACGAATCGATATGGATGTT # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTAATAGAATCAGATTGGAATTTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 1 16616-14881 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCNA010000031.1 Coprococcus catus strain DFI.3.20 EOGFDFHN_31, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================================ ================== 16615 36 100.0 35 .................................... TGAGGAATATCTCATTCTGCCTGGAGGAGCAGAAG 16544 36 100.0 34 .................................... TCTGTTGAAAGTTCTCCTGACAGCTTGTATTCGA 16474 36 100.0 33 .................................... GTAGACGAAATCCATCATCAATGTCAAATTCAG 16405 36 100.0 44 .................................... CTGTAAAAGCATCGATAAATTGCCACTGCTTAGAAAATATTCTA 16325 36 100.0 38 .................................... TTACTTAATACTTCCCGATTAATTTTAACCTGCATTTC 16251 36 100.0 34 .................................... CTTCATGTTCATTTTCCTCCTCTTCAATATCTTA 16181 36 100.0 33 .................................... CTTTGCTTGTTTCTTTAATTGTAACTGCCATTT 16112 36 100.0 42 .................................... TTTGAACTATAAACCTTTGCTAGATGATATTGCCCACATATT 16034 36 100.0 40 .................................... AACCCCCTCAACATTCTATACATTTAATTGACCACTCTGG 15958 36 100.0 41 .................................... TTAATAAAGTATTGCTGACCTTTGCCAGTAACCTTGGTGGT 15881 36 100.0 39 .................................... AATATTACCGCAATCACATTTACATTTCCAGATTACACT 15806 36 100.0 36 .................................... TATTACTGCAATCACATAAGCTACTCTTTCTTTCTC 15734 36 100.0 44 .................................... GCGGACTTAGACGGCTGCTTATTACCGTTTTCAATGTGGGATAA 15654 36 94.4 38 ..............A....T................ TATACTCCTTGCCTCTTTATAGTTTGGAGTTACAGCTC 15580 36 94.4 41 ..............AC.................... AATACCTCCGTGTATTTTTAAGTTGTGTTTGTTTGTAATTG 15503 36 97.2 44 ...............A.................... TTTCGAAATCTTTTTTCATTTTAACAAGCGCCTCCTAACTTACA 15423 36 97.2 39 ...................T................ TAGAATAAATCTTCCTCTTCTGTCGTGAATGAACCATAT 15348 36 100.0 37 .................................... GTGTTATAACTTATCAGAAAAGAATAACCCCTTGTCT 15275 36 94.4 36 ..................T.........G....... AATCGTTCTAGTTACCATTCGTTTTCTTGCCATATT 15203 36 100.0 37 .................................... CGATATGACTTTCTTATGTAAGAATCAACATTTGACT 15130 36 94.4 35 .....A.............................T ACAACTGCCTATTGTGAGTCGATTATGACCTTCTT 15059 36 94.4 36 .....A.............................T TCTTCTGGTGCTGGTGTCCAGTCGGTGGCTTTGTTG 14987 36 97.2 35 .....A.............................. ACTACATCCTATATTTGGCTTAACAACGGTCTACA 14916 36 77.8 0 ......C.......AA.....TC........C..TT | ========== ====== ====== ====== ==================================== ============================================ ================== 24 36 97.6 38 ATTTGGAAATAAGATGCCCCGAGAGGGGACGGAAAC # Left flank : GGCGGGTGGATGAGGTCCCGTGAGGGAACGGAGTATACTTGTAGATTGCCTTTTGGAATTTTTTAGATGATTCAGAAAAAGATACCCCGAGAGGGGACGGAAACGCTGGAATTTTATTATTGGCGAAATAATTCATGTTAAAAAAATAATAAACTCCGAGAGGGGCGGGAACTCGTTATTTCCAACTGTAACCCTAATCATAATTTCCTCATTTGGAAGAAAAACTTTTTATTTAATTTCAGATGCAAATGTGGAGAGTCTGTGATAAAATTTCTATGAATGAGAGTACTTTAAAAAATAGAAAAAGAACAGGTTTATTCTAAAAAGTAAAATTGCTGTTCAGATAGTATTGGTATAGTTTATAATTTTTCCGCGCACCGCATAAATACTGCATTTGGAGGCGATTGTGTATGTTAGATATAAGAAAAATATACAAGAAAATGATTTGCCACGCAAAAGAGTCAGAAAAGCCAGCAAAATAGCGGGCTCTGGCGGGCAGT # Right flank : TTATCGTTGCAAAACGATGAAAGGGGGATGAGTACGTGAGTTTACTGTATGTGAATGAAAATGGAGCGCTCATTGGTATTGAAGGCAACAAATGTGTGGCGAAGTACAAAGATGGCATGAAGACTTTTATTCCAATTGAGTCTTTGGAAGGTATCACGATTATGGGGCAGTCGCAGGTGACGACGAAATGTATGGAAGAGTGCATGATGCGTGGGATACCTGTGACTTATTTCTCAAAAGGCGGCAGATATTTTGGACGTTTAATGTCCACGGGCCATGTGAATGTTGAAAGACAGCGAAAGCAGAGCGTATTGTATGATACGGATTTTGCAGTGGAACTTGGGAAGAAAATTTTGAGCGCCAAGGTGAAGAATCAGAGTGTGGTTTTGCGGCGATATGAAAAGAGTAAGCATAAGACTCTGGAAGAGGAACAGCAAATGATGTCGATTTGCCGTAACCGTATTCTTACAAGCAAGAAGATAACGGAGATGATTGGTTTT # Questionable array : NO Score: 3.14 # Score Detail : 1:0, 2:0, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTGGAAATAAGATGCCCCGAGAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,13] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.50,-7.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,1.15 Confidence: MEDIUM] # Array family : NA //