Array 1 3904-445 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMMA01000003.1 Deinococcus wulumuqiensis strain CGMCC 1.8885 sequence003, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================ ================== 3903 37 100.0 36 ..................................... ATTCATATCTCCACCCACGCCGAAGGAAACGGCACG 3830 37 100.0 36 ..................................... TGCTCCTCGCGCTGCTGGTCGGCGTGCTCGTGGGCC 3757 37 100.0 36 ..................................... TTCGGTCCCCGGCCGCCATGCAGCGCCAGGTGCTTG 3684 37 100.0 36 ..................................... CGGTGAGGCTCGCTCGCAAAAGGCCCTGAGCAAAGT 3611 37 100.0 35 ..................................... GACGGTCCAGTTCCTGCACGGCCTGTTCCACCGCA 3539 37 100.0 36 ..................................... ATTCATATCTCCACCCACGCCGAAGGAAACGGCACG 3466 37 100.0 35 ..................................... CCGAAGGCGCCCCGAAGATCATGTTCGTCTGGAAG 3394 37 100.0 36 ..................................... AGTGTCTGGACACCGAGCGCGGCACGGTGCGCGGCA 3321 37 100.0 36 ..................................... GTGTAGATGACCCACTCATCGCCGTTGGGCAGCACC 3248 37 100.0 33 ..................................... AGTCAATCGGCGTCTGGTCGAAGGCCAGAGCGG 3178 37 100.0 35 ..................................... TCTGCCATGTACGCGGCGTAACCGGGCGTGGCGGG 3106 37 100.0 37 ..................................... GAGGAACTGACGGGGCGGTTCGTGTGGGCGTCCCTGC 3032 37 100.0 38 ..................................... TGCCGCTGCCGGAAAAACCCCGGCCTGAGCCTCAGCCG 2957 37 100.0 36 ..................................... TGGTCCATATGGACACGGCCATCAACAGCGGGCCGG 2884 37 100.0 37 ..................................... AGTTCGGGGCTGAGTAGGGCCTGGGCTTTTGCTTCGA 2810 37 100.0 43 ..................................... CATGCCCTGGAGTCAGGCCTTCGTGCTGGCCCTGATCGCGTTC 2730 37 100.0 37 ..................................... GTGATTCGCGGGGACTGGGGGCGCCGGTGAAGCCCGG 2656 37 100.0 35 ..................................... TGACCACCACGCTGCTGCTGACCAACCCCGGCCCC 2584 37 100.0 35 ..................................... CGCCTCGGCTCCCGCTTCTCCTCCACCTTCTCCGG 2512 37 100.0 35 ..................................... GTCTCGCGCAGGATGATGTTCGGCTCCTTGAACGC 2440 37 100.0 35 ..................................... GTCTATAACCCGGACGGCACTCCCAAAATGGCCTA 2368 37 100.0 36 ..................................... AGTTCAAGCCGAAAGCGGCAGGTAGGTGTGAGAGGT 2295 37 100.0 35 ..................................... CAGCAGCCCGGAAATGAGGCGCGTGGGCTTAGGCA 2223 37 100.0 37 ..................................... GTGATTCGCGGGGACTGGGGGCGCCGGTGAAGCCCGG 2149 37 100.0 35 ..................................... GTCTCGCGCAGGATGATGTTCGGCTCCTTGAACGC 2077 37 100.0 35 ..................................... GGCACCAGTCGCTGATTTCTCGCTGGGAAGCAGAC 2005 37 100.0 35 ..................................... AGCCACGTCATCTTCTGGTGGCAGAAATCGGCAGA 1933 37 100.0 37 ..................................... GACTGACGCCGTAAACGTAGCCGGAATTGAGGGAGCC 1859 37 100.0 34 ..................................... GCTCAGGGCACGGTCATTCAGGGCAACGTGCCCG 1788 37 100.0 35 ..................................... AGCGCAGCACGCACGGCACGGTGCTGCTCACGCTC 1716 37 100.0 36 ..................................... CGCCATCATCGGGCCTATGGGAGTGACCACATGGCT 1643 37 100.0 34 ..................................... CCGAGTGAGCAGGTGCGCGAACTTGGGGCGTACC 1572 37 100.0 34 ..................................... CCCGCTCGGCCAGCGCCACAGCCTGGGCGTGTAG 1501 37 100.0 34 ..................................... CTGTTGCTGGCGGTGGGACTGCTGCCCTGCCCAA 1430 37 100.0 35 ..................................... TCCGCGACGGCGCGACGTGGCAGGAAGTCACCAGC 1358 37 100.0 35 ..................................... GCTCAAAAAGTGGGGCGACGAGACGCTAGACCTCT 1286 37 100.0 37 ..................................... AGTTGGACGAGATCCTCCAGGCGAACGAAAGCCTGAA 1212 37 100.0 37 ..................................... AGACGCTGCACGTCACCAAAGACGGCGCAACCCTCGA 1138 37 100.0 35 ..................................... TACCTGCTGTTCCAGGGCAACGCGAACGCCGCCAA 1066 37 100.0 34 ..................................... CCCGCGACGGCGAGTACATCGACGGCGGCGACAA 995 37 100.0 35 ..................................... TGCGGCGTGCCATAGCTGTCGCGCTGGGTCAGCCA 923 37 100.0 36 ..................................... GTCAGCGCAGGCTTGTTCATCTCGGCTTCGAGGTCG 850 37 100.0 35 ..................................... CTCACGCCGAGCCATGTGCGGAGCCTCGCCCGGAA 778 37 100.0 44 ..................................... CGGCAGAGGAGAGGGGCGGCAAGCGCAGGCCAAAGGCCGGGAAC 697 37 97.3 35 .........G........................... GGTAGGGGAGAGGGCGCTTCGGGCATCGGGACGAA 625 37 97.3 37 .........G........................... AGGAAACAGGGCTTGCGCTGCCTTCATCGCTTCGAAT 551 37 97.3 33 ...........................C......... AGACAGCAGCGGCAGCAGCGAACTCCGGCGAGC 481 37 94.6 0 ........A.G.......................... | ========== ====== ====== ====== ===================================== ============================================ ================== 48 37 99.7 36 GCCACATCGAAGAAGCCCAGCGTTAGGGCACTGAAAC # Left flank : CCCTGCTCGTTGAGGCCGAACTGGGGCTGACTTGCCCCTATGGGTACTGGCACTCGAGCCGCACCCGGCAAACCCATACCGTCCCCATAGATACCCGATTGCGAAGGCGTACCCTTCAAGCGATTGCCGAAGTGCGCGCTTTCATTGAGCTTGAGCGGTGCCCGCCTCCCACCTCAAAAACGGTAAAATGCTTGGAATGCGAACTGAGGAACTTCTGCGGAGATACGCTGTGACCCGTTCGCAAAAGCTGAGGCTGCACGCAGAGCCGCCTGATTTGCGAAGCGTTGTCACGGCAATTTTGCCGCTTTTCGGTGATGAGCAACCCAGAGATCCGCTCCTCATGGAAAATAAGAGTGTGTCAGACACACCGCAAATGGCCCTATCCAACGTCTCTCCTGTCATTTGCGACCAACATGGACAGGCTATACTTTTGCCGTGATGGAGGCATCACGCGCTACATGACAGCCCAAATGAATTTGAGAAAACGCGTGAAATAAGCG # Right flank : CACGAAGATCAAGAACCTGCGCCGGCCGCTGGCTCGTGGCTGGGCCGCTAGACCAAGGATTCGCTTACCCAGAATCGACCTGTCAACACGGAAAACAGCCAAGGCTTTTGTGCCACAGTTGTGCCACAGTTTTTCTGGAAAGCCTTGGAAAAAGCCGGAAAAAGCCAGACGCCTCACACGCAAAAACCCTCTCCCAGTGGGCGTTTTTGGAACATCACGGAAAATGCCGGAAAACCCGGATGAGTATTCGTAATCAGTAGGTCGTCGGTTCAAGTCCAACCCTCAGCTCCAAGAAAAAGCCCCGCCTAGCGCGGGGTTTTTGCTTTAGTGGTTTGCAGTAGGTGCGCCACCAAACGGGTTGTGCCACAGCTCAGTAGGTGACAACTTCGTCTCCAGCCGCGCCTGGCGGGCAGAAAGGACGGGTGAGCAGTTCCAGGAAAGCCCT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCACATCGAAGAAGCCCAGCGTTAGGGCACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,12] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.30,-7.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA // Array 1 1205-31 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMMA01000019.1 Deinococcus wulumuqiensis strain CGMCC 1.8885 sequence019, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 1204 37 100.0 33 ..................................... AGCCAGGACTACCGCCACACTGCCCGTGCCATC 1134 37 100.0 34 ..................................... GTTTCATGGTCTGGCTCCTACGACGATGAGCGAG 1063 37 100.0 35 ..................................... TTGTTGCGCTCAATCCAGCCATACCCGCAGATGTC 991 37 100.0 35 ..................................... TCGCGCATCTCGGAGCGCAACCTTGCGCGGGCGTG 919 37 100.0 34 ..................................... TGGGGTTGCTGGAACTACAGGCACCCTGAACCCG 848 37 100.0 36 ..................................... ACGTAAAACGTCACGGTGAAACAAGCCCGCCGCTTG 775 37 100.0 32 ..................................... GATTACCGCCGCACACAAGGTGCCCTGAGCAG 706 37 100.0 35 ..................................... TTCGGTATCATGAAGCCATGACCGGAGACATCGTG 634 37 100.0 34 ..................................... CCCCCGTCACCCTGCACCTGAGCATCGACGGCGC 563 37 100.0 33 ..................................... AACTTTTCCGAACTGGGTCAGGACATACACTCG 493 37 100.0 32 ..................................... TCGCCCCAGTGGAACGAGCCGCTGGAGACGAC 424 37 100.0 34 ..................................... ATACCGGGCCACGCTGATAAGCGCGTCGCCCGCG 353 37 100.0 35 ..................................... ACCTCGCTTCCGGCTACGCCGCCGCGCATTTCACC 281 37 100.0 34 ..................................... CCCCCGTCACCCTGCACCTGAGCATCGACGGCGC 210 37 100.0 34 ..................................... ACGATTAACAAGATGAACGGCGTGGCGCTGAGCA 139 37 100.0 35 ..................................... GCCGCGTGGTTGTGGGTGCTGCGGTTCGTGCTTGT 67 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ==================================== ================== 17 37 100.0 34 GTTCCGCCCGGCTGTGCGCTGGGCGGTGGATTGAAAC # Left flank : CAGGGCCCACTATCCGCCGTACCTCCACCGATGATTGACTTACTGGTCTGCTACGACGTGAAAACCGAAACCGAGGCCGGACGCCGCCGCCTGCGCCGGGTCGCCAAAATCTGCGTGGCGCACGGGCAGCGCGTTCAGAACAGCGTCTTCGAGGTCGGCGTCACCGACGTTCAACTGCTCCAGCTGCGCGAGAAGCTACTGAACGCTATGGACGTGACCGAGGACAGCATCCGCATCTACCGCCTGCGTCAGCCCCGCGAAAAATTCGTGGAGGCGCACGGCGTGGATAAGTACATGGATTTCAGCGAACCCCTGATTCTGTAGCGCGAACCTGGTGCGACGGAAAAGACCGGGAGGTTTCGCGCCGCCTAAAAAGTCCGTACAGGACGAGCCGCATGACAAATAGATATTTCCGATACGTCCCCCTTTCTGGACTTCGGCGCAGGGTTCGCGCAAACTGATGTCGGGAAGTCGTCTGGCACGTATTTAGACGATGAACT # Right flank : CTCAAGATTTGACGGGGACAGACCGTGAATC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCGCCCGGCTGTGCGCTGGGCGGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-10.60,-14.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [25.0-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : NA // Array 2 58975-53035 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMMA01000019.1 Deinococcus wulumuqiensis strain CGMCC 1.8885 sequence019, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =========================================== ================== 58974 37 100.0 33 ..................................... AACGTCAAAACACTCGCCGACGCCTGCGCCTGC 58904 37 100.0 34 ..................................... TCCGGTACGCAGACCATGCTGCTCATCACCTTGC 58833 37 100.0 34 ..................................... TCGCGGTCCTCGGTCTGCCGCTGCGTCACGGCGT 58762 37 100.0 35 ..................................... GCTCCCCCCAACACGCATCGGGGGTACCCCTCACC 58690 37 100.0 35 ..................................... ACGCTAAATCTGGCAGGCAACCCGGCCTACTTCGT 58618 37 100.0 33 ..................................... CGCAGCCAATCCACGTCCTGCATGGTGGCAGGG 58548 37 100.0 34 ..................................... CCGATTGGCCGGTTCGCACCAGGTGGATGTTGTT 58477 37 100.0 36 ..................................... ACCGGGACGCCTACCGATAAGCATGACGACCAAGTG 58404 37 100.0 33 ..................................... TGTAGATGAGGCGTTGCAGTCCATGCTTGACGA 58334 37 100.0 35 ..................................... ATCCGGTCAAGCTGAATCGCGTGGTCTGGGTAGAG 58262 37 100.0 35 ..................................... CTGCGGGCATCGCCAAACAAGCCCGGCAACGCAAA 58190 37 100.0 34 ..................................... CTCCGACAGTGACTCATCCTCCGAACGGTAGGAC 58119 37 100.0 34 ..................................... CAGAACGGGTCTAGAGCCACCTCGCGCACCGCGT 58048 37 100.0 33 ..................................... TCCTGAAGGACAACGGGCGCGGCAGGCAGCGGG 57978 37 100.0 35 ..................................... ACCGACGAAAACGGCAACCCCGTGGAAGCCGTGAG 57906 37 100.0 35 ..................................... AGTGCTGCTCAGTGCCTCGGCGCGGGCCTGCTCAG 57834 37 100.0 34 ..................................... ATACCGCACGCGCTCCGGCACACGCTGGGCGAGG 57763 37 100.0 34 ..................................... CTCTCCGATGAGGGCGGTTGGGATACCCCGTTCC 57692 37 100.0 33 ..................................... AACTCAAGGGCGTGAACGGCATGAACCAGACGA 57622 37 100.0 32 ..................................... AGCGCGTCGGTGTCGCTGACCTCAGTGCCGGG 57553 37 100.0 34 ..................................... AGCATTAGTCATCCATTGACCCTAAGAGCATGGA 57482 37 100.0 34 ..................................... AGCGGGGAGTGGCCTGAGTTCGTCGGGGTCAAAG 57411 37 100.0 34 ..................................... AGGCGGCCTTGCCGACGACTGCCGCCATCAGCCG 57340 37 100.0 34 ..................................... TTCCAGGAGCCGCACCGCCTCTTGGTCCAGCGCG 57269 36 81.1 33 ...........................C.-C..CGCT GGCCGGTGGCGCCCGAGATGTTCCGCCAGCGCG 57200 37 100.0 34 ..................................... GGCTCTGGAACCTCGGTGCAGGCGTCCTACTCGG 57129 37 100.0 34 ..................................... ACACGCGCATGGAAAACGCTACAGAGGCGGAACC 57058 37 100.0 34 ..................................... TTCTCGCGCCGCCGCTCAAGCTCCATGGCGGCTC 56987 37 100.0 35 ..................................... CGGCCCGGAGGCGCGGCCACCGAACGTCTTGAGCG 56915 37 100.0 37 ..................................... TTCGCGCTGGTGGTCGCGTGCGCGGTCAACTGCTGCA 56841 37 100.0 35 ..................................... TCCTGCATCTTGGCGCGGGTCTCGGCAACCATCGC 56769 37 100.0 35 ..................................... TGCCGGGGGCAGGTAGGGGCCGACCAGCTCAGCCG 56697 37 100.0 34 ..................................... CGGGCGAGTGCCTAGCGGCGAGCGCCTTCCCTGC 56626 37 100.0 35 ..................................... TCCTGGCACGCCCGAAAAGCTACCCTTCCTCTTTC 56554 37 100.0 34 ..................................... ATAGTTGACTAACCTCATAGTCTGCCCGCTGGGT 56483 37 97.3 33 .....................A............... CCCCGTTGCTCTGGGTGGAAAAGATACTCTGTT 56413 37 100.0 36 ..................................... TGGCAGTTCGAGGCGCAGACCAAAGCCGCCCGCGCC 56340 37 100.0 33 ..................................... CCCCGGACCTCCAGCTCCAGCCCCAGCACGTCA 56270 37 100.0 19 ..................................... ATTCGGCAAGCATACTGCC Deletion [56215] 56214 37 100.0 34 ..................................... CCGGCTGCCACGCCAGAACCACCAGATACCCGCC 56143 37 100.0 34 ..................................... ATAGCCTTCAGGCGTCAGCTTCTTCGCGCAGTCG 56072 37 100.0 36 ..................................... TGGTAAGCGACGCGCGCGCGATCTTCGCGGCGCAGG 55999 37 100.0 34 ..................................... CCTCAGTTGCCAGGGCCGTTAGGTCGCGCTGTAG 55928 37 100.0 35 ..................................... GACAGAGACCCCGTCCAGAGGACTCAGCGGGTCCG 55856 37 100.0 36 ..................................... ACTGTCGAGGCGAACGATTATGACGACGATCGCCGG 55783 37 100.0 34 ..................................... AGGGTCAGGGTGCGCTGGCCCTCGGCGTCGGCCA 55712 37 100.0 33 ..................................... ATCAGGTCAAGGTGCTCAGCCATGCGAGCCTCC 55642 37 100.0 33 ..................................... AAAGGCAGCCCCGAGCGCGTCCGCTTCGGCGGC 55572 37 100.0 34 ..................................... TCGCCGAGGCCTGCCTCGCGGTGGGCGACTATGC 55501 37 100.0 35 ..................................... TCTCTGATTCTGTTCTGAACTTGGATTTGGCCTCT 55429 37 100.0 34 ..................................... CATCGGGAGGAATGAACCCGCGGAGAGGTCGAGG 55358 37 100.0 37 ..................................... ACGATGTCGCGGGCAATGACCACCACAGCGTCACGGG 55284 37 97.3 34 .........................A........... ACGCCCTGGCTGGCCCGCATCGGCGCCCTGTTCG 55213 37 100.0 33 ..................................... ACCAATCCGATGCTGGCGGCCCTGGCACCGGCG 55143 37 100.0 33 ..................................... CCGACAGGCGACAGCGTGACGATGAACGCCGCC 55073 37 100.0 35 ..................................... AAATGGGGGCAGAATGACCAGGGGATTAGAACAGG 55001 37 100.0 35 ..................................... TAGCTACCGTAAAAACGCCCGCTGGCCGTGCCCTG 54929 37 100.0 33 ..................................... TCAGCTAGCCCGCGCAAGTGCCGCCCGCCTGGG 54859 37 100.0 34 ..................................... CCATGACGTTTGACCCGAGTGCCCTGCCCCCCAT 54788 37 100.0 43 ..................................... ACCGATACGGAGCTGTCCGCCGCTCNNNNNNNNNNNCGTCGTG 54708 37 100.0 35 ..................................... CTGCATGATGCCCACGCTGAGGGTTGCCCTGTCCC 54636 37 100.0 32 ..................................... TTCCGAGAAGGGTTGCCACGTGTCGACCGCGC 54567 37 100.0 34 ..................................... CTCCGAGGGACGCATTCGCGTGCTTGTCACGAAA 54496 37 100.0 35 ..................................... TCAAGCGGATGCTTATCGGTCATGCGGGGAGTCTG 54424 37 100.0 35 ..................................... CCGCTATCCAGGGTAACGAGTCCCGTAACGGCACA 54352 37 100.0 36 ..................................... CTGAACACCGAAATCATGCCCGCCTGGGAGCGCGGG 54279 37 100.0 33 ..................................... AGCGCGGTCATGGGTGCCGCCTAAGACGCCCTG 54209 37 100.0 35 ..................................... TTGCGCTGCCCGTGCGCGGTGGTAAGTGCCCCGAG 54137 37 100.0 35 ..................................... TTGCGCTGCCCGTGCGCGGTGATAAGTGCCCCGAG 54065 37 100.0 34 ..................................... GCCGGGGGGTTGGCCGCCGGGTCAAAGACCGCGT 53994 37 100.0 34 ..................................... AAAACGTCGCTCTACGCCACCGCCACAGCGGTTG 53923 37 100.0 35 ..................................... CGTAACGCTCTCCGCGTGACACTGGAGACCGTCAG 53851 37 100.0 36 ..................................... TGAGCGACGACCAGACCACTCACGAGGTGACCCCAC 53778 37 100.0 33 ..................................... CTAGAGTTCCAGCGGCGGGGCGCTCCGCATCTG 53708 37 100.0 34 ..................................... TGCCGCCACGAGTCCGTGGGGAGCGCCGAGGACG 53637 37 100.0 33 ..................................... TGTAGATGAGGCGTTGCAGTCCATGCTTGACGA 53567 37 100.0 34 ..................................... CGGCCCCTAGAAGTCGCCATCGAGTACACGACGC 53496 37 100.0 33 ..................................... CTCGAACTGCCGCTCAGTCTCCATGCCGAGCAT 53426 37 100.0 34 ..................................... CCAACCTGACCAACGCTGTGAACGGCAACACCAA 53355 37 100.0 34 ..................................... CTCTCCCGAAATCGTGGCGGAGAGGGTGTCGTCA 53284 37 100.0 34 ..................................... GTCTCAAAACGTGTGTTTCGGCAGGGACACAACG 53213 37 100.0 34 ..................................... AAAGGGCGAGCCGTGATGATGCTTGAGCAGGTAT 53142 37 100.0 34 ..................................... CCTGCCCCCACGCCCTGTGATGCCCGCCAATTGG 53071 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== =========================================== ================== 84 37 99.7 34 GTTCCGCCCGGCTGTGCGCTGGGCGGTGGATTGAAAC # Left flank : TTGAAACCTCCTGGTGGCTCAGGCAGCGGCGCAGGCCGG # Right flank : AATGCCGCCCGGTGCGACGGTGTTGAATCGCGATTTCACGGCTGATGGGCCGAACCAAAAATGGGCTACGGACGTCACCTATCTGCCGACCACGGAGGGGTGGCTCTAACCCGCGACTGCTATGGACTTGTTTTCTCGGAAGATTATCGGCTGGGCGCTGGATGAGCGTCTATATACGCCGCTGGTGAAATGGCTGTAGAGCGCCGTCAGCCTTCAGGAGGGCTCTCGCACCGCTCGGATAGGGGGAGCCAGTACACCAGTGAGGTCTACCGCCAAGCCTTGGAAAGGCTTGAAGCCGTGCAGAGTATGAGCGGCAAGGGGGAATGCTGGGATAACGCTGTTCAGGAAAGCTTTTTTGCAACTCTCAAGACTGAGCTTGCACTGCATGACCCCCAGTGGGGCCGTGCCCAGACGCGGAGCGAGGTTTTTGAGTGGATTGAGGTTTTCTACAACCGTAAGCGCCGCCACTCGGCGCTGGGCTACCTGTCACCGGTGGCCTT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:0, 3:3, 4:0.99, 5:0, 6:0.25, 7:-0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCGCCCGGCTGTGCGCTGGGCGGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-10.60,-14.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [41.7-20.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [1.05,4.87 Confidence: MEDIUM] # Array family : NA //