Array 1 33625-32137 **** Predicted by CRISPRDetect 2.4 *** >NZ_APUO01000093.1 Neisseria meningitidis 2008223 gnm2008223.contig.92, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 33624 36 100.0 30 .................................... ACAAAGCCGCAAATCGTCCGCCGCGTATCA 33558 36 100.0 30 .................................... TTGCCGGATGAAGAGGTGGCGTTTGTTGCC 33492 36 100.0 30 .................................... TCAATGATAAAACTAAAGTTTAAACAGAAC 33426 36 100.0 30 .................................... ACTCCCTGTTTATCGGTTTTTCAGCTTAAA 33360 36 100.0 30 .................................... CTGAAGCCTCTCTTTTAACGCCATTTTTAT 33294 36 100.0 30 .................................... GTCAAGCATACTAAACGATTAATAGCTTAG 33228 36 100.0 30 .................................... CGATTTACCACCCATAAAACCACCTCAAAA 33162 36 100.0 30 .................................... TAATTTGCGTTTCGTGTCGCTCATAAACCC 33096 36 100.0 30 .................................... TCATAATTGTATAGGTAAATGTCATCAACA 33030 36 100.0 30 .................................... CTGATGAGTTCTCTACGCATGGGACGTAGG 32964 36 100.0 30 .................................... GTGCATTCTGCCTCGTCGGCTGGTACGTAA 32898 36 100.0 30 .................................... TCAGTTGTTTGATTTAAGCAAGATTCCTGT 32832 36 100.0 30 .................................... GCGTAGAACAACCGGCAATGACTAATTTTG 32766 36 100.0 30 .................................... TGAAGTTGCGCCGATTGCACCAACTGATGC 32700 36 100.0 30 .................................... ATCCGTTTGAGGCTAACAAGCCAGCCACTA 32634 36 100.0 30 .................................... TGAGTTGTAGTTGTAGCTAGCATCAATAGA 32568 36 100.0 30 .................................... AAATGACGATGCGGAACGATTCAGGCAGAG 32502 36 100.0 30 .................................... GTGTGCCTCACTGTGCGCATTAAGTTGGTC 32436 36 100.0 30 .................................... AATGACGAGGCTTTGGATTGCGAGGATTTA 32370 36 100.0 30 .................................... TTTTATGTTTCATATGGACGCGGTTTGGTG 32304 36 100.0 30 .................................... AGTATTGGTCGTGACGACTGTCCTTGCTGT 32238 36 100.0 30 .................................... CGTAACGTCCAACGCCGTCTGAATAATACG 32172 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 23 36 100.0 30 GTTGTAGCTCCCATTCTCATTTCGCAGTGCTACAAT # Left flank : CCCATTCTCATTTCGCAGTGCTACAATTAATTTGCGTTTCGTGTCGCTCATAAACC # Right flank : ACCCCAACGGGAAATCCTTATTCTATAAGGATTTCCCGTTTTATTTAGTCTGAAAAAATGGGCTTAAAATAACAATAATTGGTCTGAATTGACCTTTTTTTCTTGGGTTTTCAGCTCGCCCAACAGCAGTTTCATGGCGGCATATTGCTTTTCTGTTATCTCCAAACAGCGGATTGAGCCTTCTTGCGGAAGGTTTGCACATAGTCTATTGTGGTGTTTTTGCAACGAATCGCGGCCTTTGACGATACGGCTGTATACGGAAAGTTGCAGCATTTGGTATCCGTCTTTTAATAAAAACTGGCGGAATTGATTGGCGGCTTTGCGCTTTGCCGCCGTGATAACCGGTAGGTCGAAGAAGACGATAATCCTCATAAATTTGGCCTCACTCATATTGGTATGCTTTCAATGGTAGGATTTCAGGCAGTTTCAGTTGTTTGGCGTTTTTATCAGTTACGCCGGCTTGAAATGACGAAACCATTTTGTCGATGGCAGCCAAGGTG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAGCTCCCATTCTCATTTCGCAGTGCTACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: R [matched GTTGTAGCTCCCATTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.90,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [65.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.5 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //