Array 1 61784-60627 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJEOY010000010.1 Streptococcus sanguinis strain SY10 ss_sy10.contig.9_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 61783 36 100.0 30 .................................... TAGCCATATAAGCATAGATTACTTCCGAGG 61717 36 100.0 30 .................................... ATATTATAGATATATCAAGTCGAGAGCTTG 61651 36 100.0 30 .................................... CTGGAGGTCTGCAAGACATGACTGACCACG 61585 36 100.0 30 .................................... ATTTTACAGTAAAACTGTCATAGATTGACA 61519 36 100.0 30 .................................... CATATGCGCAAAATTAAATCATTTGACCCA 61453 36 100.0 30 .................................... ATGTTGTCAGGCAATGAGATGACAGCTTCT 61387 36 100.0 30 .................................... AGAAAGGCCTCTTATAAGACTAAGAAAACG 61321 36 100.0 30 .................................... AAATAATCATAATAGCTTGGTGCATTTGTA 61255 36 100.0 30 .................................... TTCATTATATAATAAAGTATCAAATTTGTA 61189 36 100.0 30 .................................... CGCAAACCAAAGCAGAATTGCGATACTGTT 61123 36 100.0 30 .................................... TGGCTACTGCGATGTTTAAAGGTGGCAACA 61057 36 100.0 30 .................................... AACCCCACTTGAAGCGGTTTTGGAAGTCTC 60991 36 100.0 30 .................................... CTGCTCCCTTTCTAGTCTGCATCAAGAAAC 60925 36 100.0 30 .................................... CCAGTCATGTGAAATCTTGCTTAGGTTACG 60859 36 100.0 30 .................................... CGAGGGTACAAGCTTACCGCCTTCCTCTTT 60793 36 100.0 30 .................................... TGGTAATGCGTGGGTGTTTGCGACAAATTG 60727 36 100.0 29 .................................... AAAATTTTGTCTAACATCGTTATCGTTAA 60662 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 18 36 100.0 30 GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC # Left flank : GGATAGTTATTTAAACTATAGTGAGTTTATAAATTGTTGTAAAAAGATGAATGAGATGACTATGGATTTACAAAATTTTCACGTTATTAACTTTCTATCAAGCGAGGGATATATTTATATAAATAAAGAAAATATAATGAATGTTAATATTGTTGCGGATTTAGTAGAACACTTTTACGAATTTTCATTTATGTATGAAAGATTTTTTGGTCAATATCCTGCTAATGAGGTACCGGATGAAAAGGTTTTTTTAGAGTCGTTACAAAAAGTTTCATCATATCTTTTTAGTAAGGATATTGCTCATATTAGTTTATCTATTCCAGATATAGTTACTTTGAAAATTATAAATCATTTGTACCAATACGATAAAAAGCCAAGAATTTGTTCTACGATGTCTAATCCGCTATTAATTAAGTTTTTGAATACCTATAATTGACAGGAATCGCAATAGGCATTATAATCAATATATGAGTATAAAAATCACAATTTTTCCATTTGAG # Right flank : AGCTTACTATAGACCAGATAGCGTTGTTCTGTTTTTATTATAGTTTAGGATAGAGGGGAATCTGTAATGTTTTATCATAAAAAGGGCTGAGTAAATCAGTCCTTTTGTTCTCTATTTCCCCAAGCAAAATTGGCTGAAGAGTTGGGTGATGAGTTCGTCTGGTGCGGCGTCACCAGTGATTTCGCCGAGGATTTCCCAGGTGCGGGTCATATCGACTTGGAGAAGATCTACAGGCATACCCATTTCCAAGCCTTGGTTGACGGCTTGCAGGCTTTCTAGGGCTTTTTCAATCAAGGAGATATGGCGAGCGTTGGACAGGTAGGTGGCGTCTTGTTCAACGATACCAGCATTTTCAAAGAAGAGCTGATTGATGCGTTCTTCAATTTTATCGATATTTTGATTGTGGAGGACAGAAATCTTCATGACATCAGTTGGCAGCTGATCCAGCTCAATCTTTTCCTCAAGGTCAGTCTTGTTAAGCAGGACGATACGATTACTAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: R [matched GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.20,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [65.0-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.77 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //