Array 1 24458-23564 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_APSG01000105.1 Neisseria meningitidis 69176 gnm69176.contig.104, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
     24457	    36	  94.4	    30	........G...A.......................	TTTTTGTATCCATTCCCAGCCGGAAATTAA	
     24391	    36	 100.0	    30	....................................	CTTTAACTTTGACCGTGTGCAATCCAGTTA	
     24325	    36	 100.0	    30	....................................	CTGACCACACCTATCCGCCAGTGCTTATGC	
     24259	    36	 100.0	    30	....................................	AAGCCGGTTTATGGCAATTCTGCCGCGTCC	
     24193	    36	 100.0	    30	....................................	ATGCCTTTTTTTGTACTGTTGTTTGAACGA	
     24127	    36	 100.0	    30	....................................	AAATTCGTTTCAGATAGCAAACGCAGTAGT	
     24061	    36	 100.0	    30	....................................	GCCGGATATGACGGTGGGCAACTGGTACAG	
     23995	    36	 100.0	    30	....................................	ATTTCGCTTTTGTATTGATTCAAGGTGCTT	
     23929	    36	 100.0	    30	....................................	AAATTCGTTTCAGATAGCAAACGCGGTGGT	
     23863	    36	 100.0	    30	....................................	AGTATTCGTCGATGATGGAAACTCGAGCAT	
     23797	    36	 100.0	    30	....................................	TTGCGCATGATGGCAACGATAATTACCATC	
     23731	    36	 100.0	    30	....................................	TACCCACGGCGGAAACCATTGCCACAAAAC	
     23665	    36	 100.0	    30	....................................	TCATACCCAAATCATCGGCATCCTGTTGGT	
     23599	    36	 100.0	     0	....................................	|                             	
==========	======	======	======	====================================	==============================	==================
        14	    36	  99.6	    30	GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	                              	       

# Left flank :   GGAAACGGTCGATGTGTTTGGCAATCATGGCTTGTGCGGTTTGCCGGAAGAAGGTGCTCATGGAAAATCCCCTAAATGTCTTGGTGGGAATTTAGGGGATTTTGGGGAATTTTGCAAAGGTCTCATTTTGCAAGATTTTAGTTTAATCATCAAACAGGGAACAGCAAAAATCCCCGCTGCAACGGGGATTTTTGTTCGGCTCTCGCCTGTGTGATTAACTTCACTAGGAGAAGCTAAAATGCTTAAATTCCTTATGCGTGGGAAAAAGTTGCTGCTGTCCGTTGAAGTGAACCACAAGTTCATTTTAGCGGTTGCTTTGCTGTTAAGTCAATGCAGTAGCTAACCCGACCACAATCAAAAAAACGCAAGTTTTCCGCCTACTCTGTGAGTGGGCGGTTTTTTCTTATTTCAAATCTGTGACACAATATCTGTCGCCTTTCTTGCCATAATTGCACTGTGTCTCAATGACTTTAACGCACGTTCGCTTATCGCAACGGCTG
# Right flank :  ACTTCGACGGGAAATCCTTATTTCATAAGGGTTTCCCGTTTTATTTGTTATGAAAAAATGGGCTTAAAATAACAATAATTGGTCTGAATTGACCTTTTTTTCTTGGGTTTTCAGCTCGCCCAACAGCAGTTTCATGGCGGCATATTGCTTTTCTGTTATCTCCAAACAGCGGATTGAGCCTTCTTGCGGAAGGTTTGCACACAGTCTGTTGTGGTGTTTTTGCAACGAATCGCGGCCTTTGACGATACGGCTGTATACGGAAAGTTGCAGCATTTGGTATCCGTCTTTTAATAAAAACTGGCGGAATTGATTGGCGGCTTTGCGCTTTGCCGCCGTGATAACCGGTAGGTCGAAGAAGACGATAATCCTCATAAATTTGGCCTCACTCATATTGGTATTCTTTCAATGGTAGGATTTCAGGCAGTTTCAGTTGTTTGGCGTTTTTATCGGTTACGCCGGCTTGAAATGACGAAATCATTTTGTCGATGGCAGCCAAGGTG

# Questionable array : NO	 Score: 6.24
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:55.56%AT]
# 	Reference repeat match prediction:         R [matched GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [-0.90,-0.40] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [0-2] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [66.7-53.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.68,4.5   Confidence: HIGH] 

# Array family : NA
//