Array 1 62698-61108 **** Predicted by CRISPRDetect 2.4 *** >NZ_NXCT01000022.1 Moraxella catarrhalis strain 4431503J 4431503J_NODE_2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 62697 28 100.0 32 ............................ CCGATCCTTCTGTCGCATCGTAAAACTGTCTG 62637 28 100.0 32 ............................ ACACTAGCCACATAAGCACCAATCATGATAGA 62577 28 100.0 32 ............................ TGTTACAAGAGCTGGAAACATTAGCTATACAA 62517 28 100.0 32 ............................ TGCCATTTTTCGAGATAGCGAGCTTATCGGTT 62457 28 100.0 32 ............................ CAGCACTTAATGCACTAACTTCATCTAGTTCT 62397 28 100.0 32 ............................ TATTCCAATGGGCGTATTGTACATAGATTAAA 62337 28 100.0 32 ............................ ATCAATACCGAAGCCAAAGCACGGCTTACAGA 62277 28 100.0 32 ............................ TGGTGATGTGCTATATGCTAAGTATGTTTGAT 62217 28 100.0 32 ............................ CAGCGGCTCTATGGAGCGATGTACACTAATAA 62157 28 100.0 32 ............................ AGTTTGGGATTGCGGAAATGGATAGATGTTTA 62097 28 100.0 32 ............................ TGCGTTATATTGCCGATTTCGTGTATTTTGAT 62037 28 100.0 32 ............................ GTAACTGCAAATACTGAAGCAGGTGATGAATT 61977 28 100.0 32 ............................ TACTAAAAAGATTTGTAGTAATTTTAAAACTG 61917 28 100.0 32 ............................ TTGGTTTTCATGATACGCGTCACGAAGCAATT 61857 28 100.0 32 ............................ GTGCTGAATGTGAAAGCATTGCATGGTCGGCT 61797 28 100.0 32 ............................ ATCTTTGCACATAGAGACCAAAACCTTATCAA 61737 28 100.0 32 ............................ GTTATAGTCAGATTGCAAGGTGTTGATACGCT 61677 28 100.0 34 ............................ ACATAAAAAGACCGCTGCCATCACACCGATTTGC 61615 28 100.0 32 ............................ GATGTCGTGCCAGATACCCAGTCTGTCCAATC 61555 28 100.0 32 ............................ AGTATTAATACACTTAATCAAAGCTTAACAAC 61495 28 100.0 32 ............................ TTAAACCCCAAGCTTTGAATGATAGAACCATG 61435 28 100.0 32 ............................ ATAAGCGATGGCGGTTGACATATCAAGCAGAG 61375 28 100.0 32 ............................ ATTTGGGTCAAGTACAATAGGACCAAATAACT 61315 28 100.0 32 ............................ ACATCATCGCCGACATTTTGCACGATGACAAG 61255 28 100.0 32 ............................ ATTACAAGGTTTTAAATAATCATTTAACGCTG 61195 28 100.0 32 ............................ AAGCGATTAATCCGCTCACCAATTGTTCTGTT 61135 28 96.4 0 ..........A................. | ========== ====== ====== ====== ============================ ================================== ================== 27 28 99.9 32 CTTCACGACCGCACAGGTCGCTTAGAAA # Left flank : CTGTGCCAAGTAAAATGACCGTCGTGTTGGCGATCGGAATATTATAATAGTGGTTTTGGTATTTCGTTTCGGTCAGGTATAAGATACGCCCATCTTTTTGCATGACTCGGCAATGCTCAAGATAAAATAAATTCGCCCGTTTGGAGTGTAAAATTGCTTTCAAATCGGTCGGTTTGAGCGTATTCATAATAATACAAATCCATGTTTAATGATTCAATTTTATCCTAACAATTTTCAACATCATTTAATATGATTTTATTGGATTATAAACTAAAAATAAATTTATACCAATCATTTTTTAATTGTATTTAGCGATTAAAATGTTTTAAGATAACCCAACCAGAAGATGGAAAAATAACTGATTGACCCTTTATTTTTTTACTATTTAAAAACTTGAATATTTTCAATAAGTTATAACATGAAGATTTTTGATTGGGTTTTTGACAAATTTTATCATAATGACTTGTTATTTCTTATTATTTTGGTTTATACTAACTCCT # Right flank : TTTTGTTCTATGGCTACGCTGATTATTTAAAATTTTTGTGCCAATCCCTTGAAAATTTTATCCTTAACCATTATGAAGATGGGGAATTTATATTAACTTTTTTGGGGCAATTTATGACCGAGCAAACCACCGAACAAACCACTATGGAAGAGATTATGGCTGAGACGACAACCGAGCAAGTCGAAGCACTTCATAGCCAAATCCAAGCGCTAGAAAATGAAGTCAAAGAAGCCAAAGAGACTGCTGCGCGTGCCAATGCCGAAAGCTATAACGCCCAACGCCGCATGGAACAAGAAACCGACAAAGCCAAAAAATTTGCACTACAAAAGTTTGCCAAAGAGCTTTTGGAGGTGGTTGACAACCTAGAGCGTGCCATTAAAGATGCTGAAGAGACAGGTGCAGATGACGCATCACTTAAAGGCATTCGCCTAACACATAAAGTACTGCTTAGCGTTCTTGAAAAAAATGGCGTCGTGGCCGTGGGTAATGTCGGTGATACA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACGACCGCACAGGTCGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTTCACGACCGCACAGGTCGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.10,-7.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //