Array 1 165323-170536 **** Predicted by CRISPRDetect 2.4 *** >NZ_LMKS01000021.1 Sphingomonas sp. Leaf24 contig_8, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 165323 29 100.0 32 ............................. AAGGCGTCGGACTGAGCTTCCCTTGCGCGCGC 165384 29 100.0 32 ............................. AAATCAGGCGGCGGCGATCTTGCGAAGGTCGG 165445 29 100.0 32 ............................. GCAGCCTTCTTCGCGCCCTTCAGCGCCCGAGC 165506 29 100.0 32 ............................. TCGACCGCTTTGCCGCTCGCCAGCACGGTGTT 165567 29 100.0 32 ............................. GCAGCCTTCTTCGCGCCCTTCAGCGCCCGAGC 165628 29 100.0 32 ............................. GGATGGCATGACCGTCACGCTCGACTGCCGGC 165689 29 100.0 32 ............................. GGGTCTGCGGACCGAGAACGCCCGCCCGCCCG 165750 29 100.0 32 ............................. GACGGCGATATCGTCGTGCCGGTCGATGCGCG 165811 29 100.0 32 ............................. CAGGTGCGCAAAGCGGCCCGGTCGTCACGCCA 165872 29 100.0 32 ............................. CACCCTGTCCCGGCGCAATACCGGCACCGGGC 165933 29 100.0 32 ............................. CATGCGCAGGGGATGCAGCCGGCGACTGGTGC 165994 29 100.0 32 ............................. TTCGGGCAGTTCATGGCGAAGCTGACCGGCGT 166055 29 100.0 32 ............................. GGCTCAAGCTGGACCAGAAGGGTAAGGCACCC 166116 29 100.0 32 ............................. TTCGATCAGTTCGTCGCGATGCTTGTCCGAAG 166177 29 100.0 32 ............................. CTGACGAACAGACAGACGCACAAGCCGTCGCG 166238 29 100.0 32 ............................. CAGTCGTCGACCCTCATTACCAACGTCACGGA 166299 29 100.0 32 ............................. TTCCTCGACAGCGTCTGGCAGCGGCAGGAGGC 166360 29 100.0 32 ............................. TTGCGTACCCACGCGCGGCGGCTGCGCCACAC 166421 29 100.0 32 ............................. CGGGTTGGGGCGCTCCCCAAGCGTGATCTATC 166482 29 100.0 32 ............................. TCTTTTCTTGCCGCGCGTAATAACAGGATTGA 166543 29 100.0 32 ............................. GTCGTCGGCCGAGTGATCTTCATCGGGCGGGT 166604 29 100.0 32 ............................. TTCGACGCTGCCTTCATCGATGAGGGTGAGAG 166665 29 100.0 32 ............................. TCGACCGGCTGCTTGTCACACAGCGCATTGTA 166726 29 100.0 32 ............................. TTTAGCGTTTGTCTGCAAGGCGGCGCTTCGGG 166787 29 100.0 32 ............................. TGCCAACAGCATCTCAGGCGTCGCACCATTGG 166848 29 100.0 32 ............................. AACGCCCCGCTCAAAGGCTTCCGCAGCGACAC 166909 29 100.0 32 ............................. ATTGTCAAAATCGATCGCATCCCCGACTGCGA 166970 29 100.0 32 ............................. GATCTTGACGATACGCATTTGCTATTCGATCA 167031 29 100.0 32 ............................. TTGTCCGCCGCTAATGATATCTTTGTCGGTAA 167092 29 100.0 32 ............................. AACAAGCCGGATCATTGGAACGATGACGTTCC 167153 29 100.0 32 ............................. GCCGCGACGTGCAAGCGGCCGAGGCCCGGTCC 167214 29 100.0 32 ............................. CGTGTTGGTTCCCAGCGCCGTAATTTCTAAGC 167275 29 100.0 32 ............................. GGTTTCAAGCGGCTCGGCATCTTCGTGAAACA 167336 29 100.0 32 ............................. GAGACGCTGAACGGTTGGCACCAGATTCCCGG 167397 29 100.0 32 ............................. GCGCCACATACCGCAGATCTTCATCTGTGGCG 167458 29 96.6 32 ............................T TTGGCTGCAGGTATCGCGGGAGGCGCGAAGAT 167519 29 100.0 32 ............................. AACGACGGCGTGGTGAAGGTATCAGCCGCCGG 167580 29 100.0 32 ............................. ACGCCAGCGAATTTGCTGCGAAGCTGTGGAAG 167641 29 100.0 32 ............................. TTCTCCCTTCCCGACCAGCGCGAAGGGCAGAT 167702 29 100.0 32 ............................. TTTGCCAAGGATCGAAGCCTTTTCCGCGTCGT 167763 29 100.0 32 ............................. TGGCCGACACCTACGTCTTCGACACCGATCTT 167824 29 100.0 32 ............................. GACGCGACGGTGACGTTGACGGTGGAGCAATG 167885 29 100.0 32 ............................. GCGGTGCTTGCCGGGACGTCGTCGATGTTCGC 167946 29 100.0 32 ............................. GTTGATAAGCTGTTGGCGGTCTCCCGGATCGG 168007 29 100.0 32 ............................. ATTCGACAGACTTCCTCGACGCTCATCCCGCG 168068 29 100.0 32 ............................. AAGCCAAGCCGCCGTTGCTAGGCAGCAAGAGT 168129 29 100.0 32 ............................. CAATACCCGGATGGAATGTAGAAGAGCATCCC 168190 29 100.0 32 ............................. TCTCCTGCCATGTGTATGCTCCTCAGGCTTGG 168251 29 100.0 32 ............................. ACGACATGGATCGAGTCATCGCCCTTGCGCTT 168312 29 100.0 32 ............................. GCGGTCTAATGTCGAAAATCGAAAACGTGCCG 168373 29 96.6 32 ............................G ACGACCGGCCCTTCAAGGATGGTGCCGCCGAC 168434 29 100.0 32 ............................. TATGCCACGTCGATCATCTGCTGGAGCTGGCG 168495 29 100.0 32 ............................. GCCAGCAATGTCGTTCGCCGCACCTTCAATGT 168556 29 100.0 32 ............................. ATCACCCTGGGCGGGCGCGGCGATCGGATCAT 168617 29 100.0 32 ............................. CAGACGCCCGGCTTAAAGACCTGCTCGGCCCA 168678 29 100.0 32 ............................. CCGGCAGCGGTGTTCGGCACCGGACGCTTTCC 168739 29 100.0 32 ............................. AACATTCGCGGCGGGTATATTCAGGGTGGCCC 168800 29 100.0 32 ............................. TGCCTTGCGAGCGGACATGTCAGGCAGGGCAA 168861 29 96.6 32 ............................G GCGACGCGCGCGAGCGTGCGCTGCTCGACTGG 168922 29 100.0 32 ............................. GTCGCGTCCTGTAGCGCCTGTGTGTCGGCGAT 168983 29 100.0 32 ............................. GATATATACGGAAATATCATGTCGCGCACAGG 169044 29 100.0 32 ............................. GACCGGAAGAACCCTTTGCCTTGCTCCAATCC 169105 29 100.0 32 ............................. CGCCTCGTGGATATCCTCGAAACGCGCATAGG 169166 29 100.0 32 ............................. CCTGTTGGCTGTAGTATGCGCCATCTCCCGTC 169227 29 100.0 32 ............................. TGGATCAGCGGACAAAGCTGGCGCTCGAAGCG 169288 29 100.0 32 ............................. TTCGCCAGCGCCATTTCCTGCGCCTTCTCGAC 169349 29 100.0 32 ............................. CGGTCCGCAACGCGAAGAAGCCGAACGGCTGC 169410 29 100.0 32 ............................. TTCCGTGAAGAGACTTCCGGGAGCATACTTCC 169471 29 100.0 32 ............................. GCGGCCGGCATGGTCGCGGAAGGCACGGCCAA 169532 29 100.0 32 ............................. TTCCGTGAAGAGACTTCCGGGAGCATACTTCC 169593 29 100.0 32 ............................. GCGCCTGAACCAAAGCCGCGTGGCCCGCGAGC 169654 29 100.0 32 ............................. CCCGCCCATTGCTCGCTTGTCAGCCCTGCCGG 169715 29 100.0 32 ............................. CATGATCCTTGTCCCCGTCCGGCTTTCGCCCC 169776 29 100.0 32 ............................. AGAATGCGACGATCGTCCGCAAGCAGGCGGAG 169837 29 100.0 32 ............................. CACGGCAAGAGCGACCGCGCGCTTATCCCTAG 169898 29 100.0 32 ............................. GTTCTGCGGTAGGTCGAAGGTGGTCGCGATGA 169959 29 100.0 32 ............................. TGGCGCTGTGCTGTCGGCGTCTGGCCCTGTGA 170020 29 100.0 32 ............................. GGCGTTCGTATCGCCGGCGTCGGGATCGATAT 170081 29 100.0 32 ............................. CACGATGAGTAACGAAACCGGGAACCATAACC 170142 29 100.0 32 ............................. GTTGACGGTCTGCGTCATGCGGTCGCCGATCG 170203 29 100.0 32 ............................. TTGCGCGCACGCACCGCCGATTCCAGACCCAG 170264 29 100.0 32 ............................. GCGACAGCTCGGCGCAGACCGTCAATCGCGTC 170325 29 100.0 32 ............................. CTCCTCAATGCGTCGCTTGGTCCCGGCCTCGA 170386 29 100.0 32 ............................. ATGTTCTGCTGGAGGTCGAGCGCAACGCGCTG 170447 29 96.6 32 ............................T TGCGTGAACAAGACGCCGTTCAAAGTCCCGCC 170508 29 96.6 0 ........................T.... | ========== ====== ====== ====== ============================= ================================ ================== 86 29 99.8 32 GTCTCCCCCGCACCCGCGGGGATCGACCC # Left flank : CCCGGCATGATCGACCGGATAAAGGCATTGTTGATGCCGGCCAGCGCGACGGAACCGCCCGGTTCATCTGCCGTGACGCCGCTCCCGTCCGATCCGGGCTGACGCCGTGCCGCTGACCGTCGTCATCACCCGCGACGTCGAGGATCGCTATCGCGGCTTCCTCGGCTCGGCGATGCTCGAACTCGCCCCCGGCGTCTATGCCCAGCCCCGCATGAGCGCCGGCGTGCGCGGCCGCATCTGGACCGTCGTCGAGGAATGGCACACCCGCCTGCGCCGTGGCAGCATCGTCATGTGCTGGGCCGAACCGGCATCGGCGGGTGGTCTCGGCCTGTCGGTCCTTGGCGAACCGCCCAAGGACGTGGTCGCGCATGACGGCATCCTCCTCGTCCGCCGCGCATTGTCGGGACGCCAGATGCCAGAACCGCCGGGGTGAGGCTTTGAAGGGTGCGCGACAGGCGATCTTTGACATCGTGAACGAAACGAGGCAGTTGACCGGCAGA # Right flank : CGGCCCGTCGTTCTTCCAGGTTACCATGCTCGGTTTCCCCCGCACCCAGGGACTGTTTACACGAGGCGCGTTTTGGATTCTTCTGTGTTCCTTTGATTTGGGACGGGGAGGACAGGATGCGTTGTCCAGCGTGCGAGGGACCGACCTGATCAAGCGGGGCCGCAAGTCGGGCAATCAGCGCTATGTGTGCCGGGCCTGCGGTCGATACTGCACCGACAGCCAGCCCAGGTTCAGTGCCGAGACGAAAGCCCTGGCGATCGAGATGTACATGAAC # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCCCCGCACCCGCGGGGATCGACCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //