Array 1 2258735-2260443 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEHIP010000001.1 Aeromonas caviae strain CN17A0166 Scaffold1_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 2258735 28 100.0 32 ............................ GGCTTATGGGTAACCAGATCACCGAATGCCAG 2258795 28 100.0 32 ............................ AGCAGGTGATGGTGTTCAAGGCTGCCCAGCAA 2258855 28 100.0 32 ............................ AGGAGGCCCGCCGGTTGCGTGGCAAGCCCGTC 2258915 28 100.0 32 ............................ ACCAAGCCCGCCAGCGGGCCGCCGGGTATCGC 2258975 28 100.0 32 ............................ CAGCAAAAAATCGACGTGCATGGCCTCAGCGT 2259035 28 100.0 32 ............................ ACAGAGGCGACGCTCAAGGGCGCGGTACAGGC 2259095 28 100.0 32 ............................ GACTGGGCGCAGGGTGGCCCGCTGATCGACAA 2259155 28 100.0 32 ............................ ATGCCAGCGCAACAGGTCGGCAAAGTTCACGA 2259215 28 100.0 33 ............................ TGTTCGTCGCAGATATTCTGCGGCCTGGATAAA 2259276 28 100.0 32 ............................ CGTTGCAAATGACGACAAGCATCAAGACGCCC 2259336 28 100.0 32 ............................ TCCTTGGGGTGGTCAAATCGGTTGGCTGTGGC 2259396 28 100.0 32 ............................ GGTCTGTTACTGCCTGGCCTGCTGGCCGCTAC 2259456 28 100.0 32 ............................ TCGGCCGAGGCGAGATCCGATGCGGCGGGCAA 2259516 28 100.0 32 ............................ CTCAAGCCGCTTGCCGAGAAGATGGTCACCGG 2259576 28 100.0 32 ............................ ACCTTCGCCAGATAGGCGTTGGCTGCTCCGGT 2259636 28 100.0 32 ............................ TGGACAGCGCAGCCCGTGAACACGGTGTTATT 2259696 28 100.0 32 ............................ AGGGAGAGACGTGGCCACGGGCTGCGCCTCGA 2259756 28 100.0 32 ............................ GATGGCTCAACGCTGACCAGCTTTGTGGTCGA 2259816 28 100.0 32 ............................ AGGTACGGTTACCGGGATGTGTTCAATGACGC 2259876 28 100.0 32 ............................ GCCTAGTTACCGGCGCGCTTCAGGCGATAGAA 2259936 28 100.0 32 ............................ GCCATGGTGGGAGATTTGGGGGCGCTGGATAA 2259996 28 100.0 32 ............................ TTTGACCACTGTCAAACATGACAGCTTATCCA 2260056 28 100.0 32 ............................ TCAATGGCCTCTTTCTTACTCCCCAGGGCCCG 2260116 28 100.0 32 ............................ ATCCTGCAGTCGGTCGCCGCCCTGGACTCCGA 2260176 28 100.0 32 ............................ ACGATGGGCCGCCCCTTGAGGTCTGGGCGAAA 2260236 28 100.0 32 ............................ GTTGTGTCGTCATCGGTGGGGCTGAAAAACTC 2260296 28 100.0 32 ............................ GTAACGAGCACGGCGCCAAGCTCGGTTACACC 2260356 28 100.0 32 ............................ AAGACCAGGTTTGGCCGATCGAACGGGAACGG 2260416 28 82.1 0 ..................TCA....TT. | ========== ====== ====== ====== ============================ ================================= ================== 29 28 99.4 32 CCTCGCTGCCGCACAGGCAGCTCAGAAA # Left flank : TGGCCGAACTGCTTAACCTTACCGAGGTGAACTGGTTGCAGGGGATGCGGGACTATATCCAGATCGGCGAACCAGAACCCGTTCCTCAGGGAGCCAGCTTTCGTGTGGTAAGGCGGGTGCAGGCCAAGAGCGCTCACAACAAGCGTCGCCGCTCGGTGGCCAAAGGCTGGTTGAGCGAAGAGGAGGCGCAGGTTCGCATCCCCGATGCTCAGCAGAAGGCGATGTCTCTGCCTTATGCCGAAATGCACAGCCTCTCGACCCAAAGCCGGATGCGCCTCTATATCGAACACGGCCCTCTGCTCGATAAGCCTGTCGCCGGGATGTTTAACGCCTATGGGCTAAGCACCACAGCCACCATCCCCTGGTTCTGACCCTCTTTTTCAGGGCGTAGCTAACTCATTGATTTTTCAATGTCTGTTACGCCCTGATAAAAATAGGGTTCAGTGACGGATTTGGGGTAAGTTCTTTAACAATCAATTAGATAGCACTAATATGTAACA # Right flank : ACTGGTTGCAGCTAAACCGGAAGGGCCGCTGACTGCAGGTTCATTCCACTCCAAGATCAGTGCAATGCTGGTTATTGAGCTACTGGGTCAACAGCTATTGGAAAATAGGCCAGAGCTGGCGGGAGCTATCTCGGATAGTGCCAAGGCTACGTTGCCTTGGTTGATACAATCGCTAGCGAGGGGAGCATCATCAATACTTGGACACCAGACTGGATCGATGTCCAATGTAATCCATCCGGGTAGTATGTCAGCCAACATCAAATGGCACACTGAGTGGCATACCACAAAAATATAAAAAATTAAAAACCCAACCTAATCAATAGGTTGGGTTTGGTATGTGGCGGAGAGACAGGGATTCGAACCCTGGGTGGCATTGCTGCCACAATTGATTTCGAGTCAATCCCGTTCGGCCACTCCGGCATCTCTCCACGGGCACTCATATTGACCCAACCCTAGCCGGGAAATCAATGTAAATCTCGTTGCAGATCAGACGACTGGCG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTCGCTGCCGCACAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CCTCGCTGCCGCACAGGCAGCTCAGAAG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //