Array 1 66959-65973 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_MJJH01000005.1 Campylobacter lanienae strain P0086 .11822_4_48.5, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                      	Spacer_Sequence                        	Insertion/Deletion
==========	======	======	======	=====================================	=======================================	==================
     66958	    37	 100.0	    35	.....................................	CCCTATAATCAAAACTTAAGGGGGCTATAATATCA    	
     66886	    37	 100.0	    35	.....................................	TTAATTGATTAAATTGTGCTCTATCAATAAATAAA    	
     66814	    37	 100.0	    35	.....................................	CATAGAAAAAAAGGCAAGTGGTATAAGCTTATTAC    	
     66742	    37	 100.0	    37	.....................................	ATAAAATAGAGCCACAAAGCGTTTGCAAATCAGAGTA  	
     66668	    37	 100.0	    35	.....................................	CATAGAAAAAAAGGCAAGTGGTATAAGCTTATTAC    	
     66596	    37	 100.0	    35	.....................................	TGAACGCCCTATTATAAATGATGAGAGCGATATTA    	
     66524	    37	 100.0	    35	.....................................	ATAATCCAACCCCCATAAAATCGAGCGGTAACACT    	
     66452	    37	 100.0	    37	.....................................	TTAATGTTACAAGCCTTGAAGATGTTGCTGAAAAATT  	
     66378	    37	 100.0	    36	.....................................	TAAAATTACTTTATTAAAACTTTAAATCACTTTAAA   	
     66305	    37	 100.0	    36	.....................................	TTATGGTGCTGATGATTAAGATAGAAGCAGTTATGA   	
     66232	    37	 100.0	    39	.....................................	AAAAAACACTTCACACTTTAGAGAATAGCCACGGAATAT	
     66156	    37	 100.0	    36	.....................................	TAGAGTTTAATGCTTCAAGGCTTTTAGCATTATTTA   	
     66083	    37	 100.0	    37	.....................................	CAAGAGCAATGGCGGATTAATTTTCTATAATGCTAAT  	
     66009	    37	 100.0	     0	.....................................	|                                      	
==========	======	======	======	=====================================	=======================================	==================
        14	    37	 100.0	    36	GTTTCAAACCAAGTTGGATTGTGGTATAATTTGCAAC	                                       	       

# Left flank :   CGTTATAAGAGAGAGAAAAACTTCTCTTACTCTAAATCTAAAATAAGAGAAAATGAAGTTAAAGATAAAGAGATTTATTTGGGGAGATGATTAATAGCAATAATACATTATCATAATAATTATTTATAAATCTAAAAATTTTTTTTAATTTTTGATATTTTTAAATAATTCTATTATTTATAGCTTGAGTTAATATTTCCATTTTACTCTCCTAAAAATTGTTTAAAAACTTCTCTACATTATCACGCTCAAAATATTAATATTGTGTAGCGATACGCATTAAAATCATCTCTCTCTTAAACTTATCAGCTCGAGCTCATCACTTTGATAAATTTTATATAACGAAGCATTTACTAAATCTATATCATCAAAATTAGCCGCTATACCTAATTCTGGGACAATCTCATCATTAAATAGCTCTATTTGCTCCCCTTTTTTTGTAAGCACAATTCTAAAAGCATTTATAAAGTCTTGAGTGTTTGTAAAATTTTTGTATTTGT
# Right flank :  ACCGCACAAAATGCCCTATTTTAGGGACTTTGTGCTTAGTTAATTGTAAAATTTTTTCCACTTAGAAAAAAATCGCAAAAAGTGGCGAATTTGTGGAAAAATATGTTATAATTCAAGCGCAAATTATACCATAATCTAGCTTATAGCGTTTGAAATCACCACAAGGTGTTTTCATATCGGGGCAACTGCCTTTGGCACCCCCGGTTATTCTCTATCATCACAATAATTTTTAAACTCACATTGCGCACAAGCTGTAATGCTAGCTGAGCTTTGGGGGAAATATCCTTTTTCTAATAGATCTTGAATTTGCGTTAGTGTTTTATCAAAATAAGCTAAATCCTCTTTATAAATTTCAAAGATTTTAAATTTTAGATTATTTGAGTAGCATAAAATCACCCTATGAAAAGGCTTTTTAAAGTGCTTACTAGCAAGTTTAGAATATGCTATAAGCTGCATTTTTGCGCCCTTGCTTAAAATTGGCTTTGATTGGTTTTTAAACT

# Questionable array : NO	 Score: 3.26
# 	Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTCAAACCAAGTTGGATTGTGGTATAATTTGCAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:64.86%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  R [-1.30,-1.90] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: R [66.7-76.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,0.64   Confidence: HIGH] 

# Array family : NA
//