Array 1 3550-4392 **** Predicted by CRISPRDetect 2.4 *** >NZ_PVNE01000036.1 Planifilum fimeticola strain DSM 44946 Ga0180967_136, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 3550 37 100.0 35 ..................................... TTTTGTTTTTCGGCAGGAGCATGGATCATGAATGC 3622 37 100.0 36 ..................................... CCTGTGGCTGTCAATCTCAAACCAAACCTGCACGGT 3695 37 100.0 37 ..................................... AAACCGAGCTATTTCGGCGGAGGTTACATCAAACAAG 3769 37 100.0 37 ..................................... ATTGAACGCAGACCCAACAACCCCCTTGACGCGCTCA 3843 37 100.0 36 ..................................... GGGGCTTTCGGTCCCTCCATCCTTAAGGGCTACCTC 3916 37 100.0 36 ..................................... GGGGTACTGAAGGCGGCGGGGGTGTCGGTGAAAATG 3989 37 100.0 37 ..................................... CTTCTCCGGGTTTCCCAAGAGTCTGGACGTGGGGAAG 4063 37 97.3 36 .....................G............... TGATCCGTTTAAGCAGGTGCTGAAAACGATCACTGA 4136 37 100.0 35 ..................................... CTACCCGGAAGATCACCAATGAAGCCGCCCTGGCC 4208 37 100.0 37 ..................................... TTGAATCAGGCGCTTTCCCGCCGCGTCCTTTTGAATG 4282 37 100.0 37 ..................................... TTTGGCCACTTCACCACGGCCCCCTAGCTGATTAGCT 4356 37 94.6 0 .................................G.C. | ========== ====== ====== ====== ===================================== ===================================== ================== 12 37 99.3 36 GTCACAATAAGAACACCTCAGTAAAGAGGATTGAAAC # Left flank : CCTTTCCAAAGGAATGGTTCCAACCGGTATTGGAGTGGTTGTCCCGGGTAACGAGACCGGGAGATGTCGTCCTCGTCCAAGGGGAATTTGGGGCGGTATATCAGGTGGTATCCTGGTGTCACCGGGAAAGCAGGATACCTGTCTATGCGACGACGGCCCGCCGCTACGAAAGCCGTAAACTACCGGACGGAACTGTTAAGAACATCCATATCTTTAGGCATGTCAACTTCCGGAGGTTTCCATGCTAACAGGACTTTTCGCAACCCTAAACTCTTTAACGCAGGAATCGGAGGATATGAGGAACTGATTTTCCGAACACCCGGAGCTTCGGCAAAAACCCCGGAGGTGTTCGGAAACGCGGAAACCCGCATGAAATAAGGAAAAATGGCTTCTTGCAAATTTCGAAGTAAGGGCAGAGTCACCTAAAAATTGGGTAATTGAAGGAGGTGTTCGGAAACTGACGTAGAAAACTAATCATATCAAGGGATTCAGCGCCCGCC # Right flank : CTCCACGAAAGCAGACAAACAGTGAGCGCATACCCTCTAATGGGTGATGCGCGATGCGGGTGAAAATCATCGAGGGGGAGCTGACCGACAGGATTCGGCGAGCCTGTTATGCTTACCTTGTAGAGAAATACAGGAGGGAGAAGCTGCAGGATGGTGGGGATTTACGTTCGAGTCTCGACCGAAGAATCCGCTCAACGGGGGTACAGCATACAGGACCAGATCCGCGAGTGCCGGAAAAAGGCGGGAACGGACGAAGCGATCGAATATATCGACGAGGGGATTTCGGGGGAGTTTCTGGATCGTCCCGGACTGACCAAACTCCGGGAGGACGTGCGGAAGGGTCTGATCACGAAGGTGGTGTGTCTTGATCCGGATCGCCTGAGTCGAAAGCTGATGAACCAATTGATCGTGACCGAGGAGTTTGACAGTCAAGGAGTCGAACTCGTTTTTGTTAATGGGGAGTATGCGCGAACTCCTGAAGGTCAACTCTTTTACTCCAT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:0, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACAATAAGAACACCTCAGTAAAGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-5.00,-5.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA // Array 2 9245-10223 **** Predicted by CRISPRDetect 2.4 *** >NZ_PVNE01000036.1 Planifilum fimeticola strain DSM 44946 Ga0180967_136, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 9245 37 100.0 37 ..................................... TGGATAAACCGCCACAACCCGGTCAATTATGGCTGTC 9319 37 100.0 37 ..................................... TTTTGAATCGTATCCAAAACCCGCGCCAGCGAGGTGA 9393 37 100.0 35 ..................................... CGCTTTTTTGATCACTTCCCTTGTCGCTAAGCAGT 9465 37 100.0 37 ..................................... GTAAAAAGCGGCAAACATTATATTTCCCTCCTTGTTT 9539 37 100.0 35 ..................................... GTTGCTGACGATAACGAAGCTTAGACCTGCCAAAA 9611 37 100.0 34 ..................................... GACCTCTTCAGTACCCCTAAGAAGAATCCGGTAA 9682 37 100.0 36 ..................................... GCTGGAACCGATCGCGAAAGTTATTTGGTCAGCTAA 9755 37 100.0 35 ..................................... GCCTCCGTCCACTCGATCTTCGTGTTAGCGGTCGC 9827 37 100.0 35 ..................................... CCGTCGGTCTTTTCCCACACCAAACTCCATTTTCA 9899 37 100.0 36 ..................................... GCAGAGAGGGGACGGATGATCTTTTAGAAGTCAAAA 9972 37 100.0 36 ..................................... AACTCCTCTCGCATACATATGACCATAGACTGTGGT 10045 37 97.3 35 ........................T............ TGACTACTTCCCGGCACCGATCAAGAAGCCGAAGC 10117 37 100.0 36 ..................................... CGGATCATCAATCACCTCGTTTTCCATCACCTCCAC 10190 34 83.8 0 .................C.........---C.....T | ========== ====== ====== ====== ===================================== ===================================== ================== 14 37 98.6 36 GTCACAATAAGAACACCTCAGTAAAGAGGATTGAAAC # Left flank : GCTATGCTATTTGGAGAAAATAGCATAGCTCTTTTTTTATTCCCATATTTCGTCGGATTTGTCCTGTTAGCGCACCTGCCCGCCGACCTTTTATAAACCCTACAAAGATGATATTGGACTCGGATAAGGATGATGCAGTTCACGAATCGCTTCACGTCGATCGCAAGCAGTGCAGAAACCCAAAAGCTAAGCAGGCGGGAAAAACCCATTATTCAATTGACCAAATTGTTTGCAGAAGTTATAGTGAAAATGTAACACCCTCGATTTGCGCTTTTTAGAGGGTCGTAGGTGACCTATGAGGGATGTATTTTCCGAACACCGGGAGCTTCGGCAAAAACCCCGGAGATGTTCGGAAACGCGCAAACCCGCATGAAATAAGGAAAAATGGCTTCTTGCAAATTTCGAAGTAAGGGCAGAATCACCTAAAAATTGGGTAATTGAAGGAGGTGTTCGGAAACTGACGTAGAAAACTAATCATATCAAGGGATTCAGCGCCCGCC # Right flank : TCTCGTTTCTCTAAGGTTGTCCCAATAGAAACATCTCGGTAAAAGGATGATTTCGTCGAAAACGGAAAAACCGTTCTTGTTCACAATGGAACCATGTTAATGACGAAGTTTGCTCCAGGCGAGGAGAGGACGAATGTCAAAGATACACCGGGCCCATGTTCAGCACCGTGAACGGTTGTTTTCGATGTTGGCCGAAATGTTGCTGGATTCCCGACAACATCGGATCAGGGATGCGGCGGAAAGGTACGGTGTTTCCCAGGAGAAAATACGCAGAGATATCAAATATCTCGAAGAAAAGCTTAACCTGCCTAATCAGAGAGAATATATCATCCGGGGACATGGTTATTATCAGGGCAATTTTGCCCGGGCGGTGGCGAATTTGTCGCCGGAGGTGCGGCTGTATCTGTTTCTCGCTCTGCGGCAGTTGCAACCCTTGTTGAAGGGGGAAGGAGAGCGGGCGTTTCAGGAGTTGCTGGAGCATACCTATTCCGTGTTGCGGG # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:0, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACAATAAGAACACCTCAGTAAAGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-5.00,-5.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA // Array 3 21143-21774 **** Predicted by CRISPRDetect 2.4 *** >NZ_PVNE01000036.1 Planifilum fimeticola strain DSM 44946 Ga0180967_136, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 21143 37 100.0 38 ..................................... CCTTGCTTATTTGACACGCAATGAAATAGGCCCTTTCA 21218 37 100.0 37 ..................................... TAGATAGGATTCACCCAAATCTTGCACGGTGACTTCA 21292 37 100.0 37 ..................................... GGAAAATATACTCGTGCGCCTTCGTCGGTCGGTCTTT 21366 37 100.0 35 ..................................... GAAAAAAATCGCAATCGGAAAGAAAATCGACGGAC 21438 37 100.0 40 ..................................... TATGAGATTTCCCTTGTTGGAGGCGAAAGCCGGACGGTAG 21515 37 100.0 38 ..................................... ATTAATGCAGGGTGCCGACCGGGAACCGTCTCGGCGTT 21590 37 100.0 38 ..................................... GAAATCCGCGTTGATGAGCACATCAAAGCCATCCAGGC 21665 37 100.0 36 ..................................... AATCCGTCCCCCGTCCCGAACGCCCTCCAGTTGAAA 21738 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================== ================== 9 37 100.0 39 GTCACAATGAGAACACCTCAATAAAGAGGATTGAAAC # Left flank : CTTTTCCAGTGCCGCCAAGGTCAGTGAGATTGTCACTGGACAGCGAATCGATTGGGATTCGCTTGAACCATTGATTTATCCCGTCCGGATCGAAGATCTCAACGTGAGGACGGAGCGGGTTTCTTTTGGAGAATTCAACGTTATCGGCTTCAAGGGGAAAATGGCCATAAGCCTGAAGGCCTTGCCGGAGGAGTCGCAGCGCATGATGTGGCGGCTGCTTGCTTACGGATCCCTGATGGGATTTGGATACAAAACGGCCTGGGGGTTGGGGCAAACCCTCCTCGATCCCCTGGATGATGCCCGCGCTTTTTTCCGAACACCGGTAGCTTCGGCAAAAACCCGGGAGGTGTTCGGAAACGCGCAAACCCGCATGAAATAAGGGGATACGAGATTTGGAAGGTGTGAACAGCGGGAAAAAGGGGCTAAAAAATTTGTCGAAAAAGGAGGTGTTCGGAAAATGGCGGAGAAGTATAGGAATGACAAGGGATAGAGCCTCCGCC # Right flank : CGCGATGGTCTCTGCCGGTCCCGACCACGCCACGCAGTCACAATCAGGACATCTCGAGGATGGAAACGCATCTTGAAATCGAATCGCTTCGATTATTTTCATTTCGTTTCCTGGGGAAGCTTTTTGACAAAAAACTGTGAATCTCCCGCCTGATATGAGGAGATTCACAGGATATTTCGCCCCTGAGAAGGGCCTTTAGAGGCCGTATGTGCGCTTCAGCTGAGGGATGTCATTCCTCTCGTATTTTTTCCAGATAGCGCTTGATGTCATCAAAGCGGAACCTTCCTTCTTTTACCACCCATTCTACGACTCGGCCGATTTCATGGCCTTTGGCGCCGGCTTGGATCGCCATATTTTTCGCGTGGAGTTTCATATGGCCCTTCTGAATCCCTTCACTCGCCAAAGCCCTCAATGCCGCGAAGTTTTGTGCCAAGCCGACCGCAGCGATGATTCCCGCCAGTTCACGGGAAGTTTTTACACCCAACATTTTGATGGCGGTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACAATGAGAACACCTCAATAAAGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-5.00,-5.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [48.3-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0 Confidence: HIGH] # Array family : NA // Array 1 963-557 **** Predicted by CRISPRDetect 2.4 *** >NZ_PVNE01000047.1 Planifilum fimeticola strain DSM 44946 Ga0180967_147, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 962 37 91.9 35 ..............G.......G.......C...... TTGATTCGAAGAGCTCCTGGGTGTTCTGGAATCCG 890 37 100.0 35 ..................................... TGTCCTCTCGATATTCCTCGGTGGCTGCTTGCACC 818 37 91.9 40 ........C..G............G............ TTCCAATCGATCCCGCTCCTTTTTGAGGGCCTTCTCCTCC 741 37 86.5 37 A.......G...........AA.T............. TCCATTTTTCAATTCCCAACTCCTTATAGGCGTCTGT 667 37 89.2 37 ........G.A.........AC............... AGAAGATTAAGGGGCTAGAGACTTTGGAAGAGAAGGG 593 37 91.9 0 ........G...........A.......A........ | ========== ====== ====== ====== ===================================== ======================================== ================== 6 37 91.9 37 GTCACAATAAGAACACCTCAGTAAAGAGGATTGAAAC # Left flank : TCCTTCTGAAATCGAGATGAATCGACCGTTTTCATTTTTTAGTCACAGGTTTGAGATGATAGGCGAGAGCATAATGAAAAGAGAGGGGAGCAAAAGCTTACGAAATCTTTTGCGATGAGGTCACGGCTTACATACATCAGAGTATTGGAGGTGAACAACACTTTCTTTTTTATATTGAAGAAACAGTTAAAGAAAGGAAAAGTGCCGCTTTTCCAATTGGCGGAATTGTTTGATCAAGTTATAGTGTAAGTATCCAAATCATTGATTTGTCGGTTGTTTCAGGGTTGTAGGTGACCTATGAGGGATGGATTTTCCGAACACGGGGAGCTTCGGCAAAAACCCGGGAGGTGTTCGGAAACGCGCAAACCCGCATGAAATCAGGGGATACGCGATCCGGCGGATGCGAACAGTGGGATAGAAGGGCTAATAAATTTGATGAAGAAGGAGGTGTTCGGAAAACGGTGGAGAAGTATAGGAATGACAAGGGATAGAGCCTCCGC # Right flank : ATCTACGAATCGAGATTGGCTCGACAGTAGCATATGCACAATAAGAACACCTTAGCGAAAGAGGAACCGGCTTTAGCCATGTCCTTAATGGTCACGTCAACACCTCATAAAAATGCCGGGGTGGCAGATGGTGTGAGTACCTTTTTCTGGAAAAGACAATCCGGAGAGAGGGATACCGGCGGGTCAAGAATGAAAAAATCTGTGAACCTCGAAAGCAGAGGTCCACAGATTCATCTTGGACAATACCCATAGACCCATACCCATTAATCTTCTGAAATTGGAGCAAATCTACTGTTTTCACTATTTAGTTATAGGGTTGAGGGTGATTGGTAGAGGCAATGGTTGCGGATATGCGGCGGAAGAACTGATCGGCATGATGATGCCTTTGGTGCTATCTAATCGGGGGAGCTGACTGTCTACAAGCTATTTCAAAAACATGATCTGCCAATGTAAAATGGAAGTATGAGTACGAGACATGAGCTGACAGACGAACAATGGGC # Questionable array : NO Score: 3.77 # Score Detail : 1:0, 2:0, 3:3, 4:0.60, 5:-1.5, 6:0.25, 7:0.01, 8:1, 9:0.41, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACAATAAGAACACCTCAGTAAAGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-5.20,-5.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.91 Confidence: HIGH] # Array family : NA // Array 2 10909-10578 **** Predicted by CRISPRDetect 2.4 *** >NZ_PVNE01000047.1 Planifilum fimeticola strain DSM 44946 Ga0180967_147, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ====================================== ===================================== ================== 10908 38 100.0 34 ...................................... CCAGCTCTTCACCTCCTCCGTTTCGAGAAGCAAA 10836 38 92.1 34 AC.T.................................. CCAGCGTTCTGGATCCACCCTTGAATCTGCATTT 10764 38 100.0 37 ...................................... GGCTGCACATTGGACAACGAACCTGAGCATTATATGC 10689 38 100.0 36 ...................................... ACCACTCGATCGGGAAATCCGATAAATCCAAGGACT 10615 38 71.1 0 ..................T.AGG.GATA.G.C.....G | ========== ====== ====== ====== ====================================== ===================================== ================== 5 38 92.6 36 GTCACAATAAGAACACCTCAGTAAAGAGGATTGAAACT # Left flank : TCTGCATTAAACGGGTTTGTTTTATTTTATTTCCTATCGTCTGAAGGTCTATCATGATCCCCTCTTTCCCGTTAAATCATTTTCTCCTATTATGTCAACTGATTCCCATAAACAGTATAATAAATATAAAACATGCTGTCCAAGTTCATAGGACCCCGCTTTTTTTAATTGACAAAATTGTTTTTGATGATTATATTCTTCGTAAAGATGTATAGGGTTGTCCAAGAGGCATTGAAACTTCCCCTCGTAGTGAGCCAGCTGGTTTTGTTTTGTGTTTTTTGAAAGGGGATTCTCCTGTATGTCTCAAGGGCTGTTTTTCCGAACACCGGGAGCTTCGGCAAAAACCCGGGAGGTGTTCGGAAACGCGCAAACCCGCATGAAATAAGGGGATACGAGATTTGGAAGGTGTGAACAGCGGGAAAAAAGGGCTAAAAAATTTGTCGAAAAAGGAGGTGTTCGGAAAACGGCGGAGAAGTATAGGAATGACAAGGGATAGAGCC # Right flank : ATGATGGTAAACCTAGGATGAACATGGGCGTCAGTTGCGTGAAAGATCTCTGGAAAGAAATTTCCGGATGGCTGGGTTTAATGGCAATTTCCGGGTGATATTTAATATCACTCCTTTGCGTTTTTAAGGAGAGATCGGTATTGTTTTTGCTGAAATATAGAATATGTGACGAGGATTTAGTTGACAGATCCCTAGAGAACTTTGACGATGATGGGATAATTGAAGGGCAATTAGAATTGATTTTTAATAACAAAAATTTCGGTTTTTGTGACAAGGATATACCTTTTGGACATGATCTGTTGGTTCTTTGGTTCAAAATGTTAAATCATGCGAAAAACAAAATTAAAAGCGGGAAAAAGTATGTAGCTGTTCCGGATATTGAATCGTCGGTTTGGATTGAATTCATAAGCGATAGACGGCATATCACTGTAAACTTGATTACATTGAAACTGGAAAGCTTTACTGGTTATGTACTTACGGATCCGATTGAACCGGAGTAT # Questionable array : NO Score: 2.69 # Score Detail : 1:0, 2:0, 3:0, 4:0.63, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACAATAAGAACACCTCAGTAAAGAGGATTGAAACT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-5.20,-5.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [11-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA // Array 1 614-137 **** Predicted by CRISPRDetect 2.4 *** >NZ_PVNE01000060.1 Planifilum fimeticola strain DSM 44946 Ga0180967_160, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 613 37 100.0 38 ..................................... TTCCTTGAGCCAACCCCAAACCCGCTCGGCGGGCTGGG 538 37 89.2 36 ........GG..........GC............... CAATTGGTCTGACCGTTAAACATTGAAGTATATTCA 465 37 89.2 34 ..TG.....T.............T............. GAATTTCCATATTCCAGTCAGAAAGACCGTTTTC 394 37 94.6 36 ............G.......G................ TCCCACCATTCTTTTAATTCCTCTTCCTCCTCGAAC 321 37 81.1 35 ..TG....G.G.....T...GC............... GCTAATGCCGCAGCCGGAACAGTAAGTATAGCTAG 249 37 94.6 39 ........G......T..................... ATATTCTCAATGCCGACGCCATCAGCCCCGGCAGGTCCT 173 37 86.5 0 ..A.....TGG.........G................ | ========== ====== ====== ====== ===================================== ======================================= ================== 7 37 90.7 36 GTCACAATAAAAACACCTCAATAAAGAGGATTGAAAC # Left flank : GGTATGTCTACAAATCGCCCGACGTCTCAAGACACTGATCGAAACGGTTCATACTTTAATTCCAGAAAAAATGTCAGCTCCCACAAAGACGGTACCAATAAGGATGATGTAACTTGTGAATCGCTTCGCGGTGATCTCCAGCAGTGCAGAAGCCAAAAAGCTAATCAGGCGGGAAACAGCCATTTTTTCAATTGACCAAATTGTTTCCAGAAGTTATAGTGAAAATGTAACACCTCGACTTGGGTTTTTTAGGGGATTGTAGGTAACCAAAAACTGTTCCCAATTGTAGGCGGTAAATGAGTTCTCAGTCACTATAAAGGATTGTTTTTCCGAACACAGGTGGAGATGTTCGGAAACGCGTAAGCCCGCGTCACACAAGGGAAAACGGCACTTTAATCATTTTTGAACAAGTGCAATATTTCCTAAAAAATTCCAATCTCGAAGAGGTGTTCGGAGAGTCGCGTAAGGTACCAGTGATATCAAGGGATAGAGCCTCCGCC # Right flank : CTCGTCGGCTCCGATGGCGGCCATCGCGTCCTTAAGTCACAATAGAAGCTATTTCAAAATTCGGTTTACACACCAAATAATGAATGCAATCAGGCAAAAAGCTCTATAGATATGCAAATATCGGTCATATCGGACCA # Questionable array : NO Score: 3.64 # Score Detail : 1:0, 2:0, 3:3, 4:0.54, 5:-1.5, 6:0.25, 7:0.01, 8:1, 9:0.34, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACAATAAAAACACCTCAATAAAGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-5.20,-5.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [7-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.5 Confidence: HIGH] # Array family : NA // Array 1 905-210 **** Predicted by CRISPRDetect 2.4 *** >NZ_PVNE01000073.1 Planifilum fimeticola strain DSM 44946 Ga0180967_173, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 904 36 100.0 35 .................................... CGATCACCTTCCGTTTTCTCTTTTCTTTCGTTTCC 833 36 100.0 38 .................................... CGGTAGCCGGTAACTCGAGCCCAGACAGCCCCGCTAAG 759 36 100.0 38 .................................... CCATGCTCTTTGAAAACACTTGGGAGTGGAATTTGGAC 685 36 100.0 39 .................................... CGGCCAGCTGCTTCACCGCCACCCGGATAGCATGCTGAG 610 36 100.0 37 .................................... CGGTATGATGTCGCTGTGGGTGCGGATGCTTTTGTAA 537 36 100.0 37 .................................... CCAGGCTGTCAAGGGAGTCCGTGAAAAATCCCTTCGA 464 36 100.0 38 .................................... CCATGCTCTTTGAAAACACTTGGGAGTGGAATTTGGAC 390 36 100.0 37 .................................... TGTTCTGCGATCCTTCTTGCCAAGATTGGCACTATAA 317 36 100.0 37 .................................... TGTTCTGCGATCCTTCTTGCCAAGATTGGCACTATAA 244 35 91.7 0 ........C....................C..-... | ========== ====== ====== ====== ==================================== ======================================= ================== 10 36 99.2 37 GTCACAATAAGAACACCTCAGTAAAGAGGATTGAAA # Left flank : CGGCGGGCGGACGCCCGGGGCCTGGTTTCGGTTTGGGGAGCAGGGGCTCAATCACAGCCCATTGTTCGTCTGTCAGCTCATGTCTCGTACTCATACTTCCATTTTACATTGGCAGATCATGTTTTTGAAATAGCTTGTACGGACGGAGGAG # Right flank : AGAAAAGGCTGGGCATAACGCCCGGGTTAAAGTTTGATTGTAGATTCGAGGCGATGATAGCTGGTGGCGAAAAAAGGTGTCGTCTACATCCAATAGTGCAAAATTCCAGGTTACCTAGTGCCCCGTCGACTAACTTAGATCGGGAAATTCCGAAGGAAAATGTTACCTCATGGTCGAATGGATTCATAGGTGATCGAAATGATTTTCGTT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:0, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACAATAAGAACACCTCAGTAAAGAGGATTGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-5.20,-5.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.18 Confidence: HIGH] # Array family : NA //