Array 1 1273802-1273107 		**** Predicted by CRISPRDetect 2.4 *** 
>NC_016826.1 Streptococcus infantarius subsp. infantarius CJ18, complete sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                	Insertion/Deletion
==========	======	======	======	====================================	===============================	==================
   1273801	    36	 100.0	    30	....................................	GCAACATCCAATATTCATTCTTCAAATGGT 	
   1273735	    36	 100.0	    28	....................................	CTTTTGAAATTATAGCGACTCAACTTGC   	
   1273671	    36	  97.2	    30	.G..................................	CTTTCCATTGATGCTAATTTAGCTGTGGCT 	
   1273605	    36	 100.0	    30	....................................	TTGACTTGCGGTGATAAATGCGCTTAATAC 	
   1273539	    36	 100.0	    30	....................................	TACACTTTTAGTCACGATAAGCATCTCATG 	
   1273473	    36	 100.0	    30	....................................	TGATTTGATTAGCATTGTTGCTGAAACAGT 	
   1273407	    36	 100.0	    30	....................................	TTGTGTTTTATGCAATTCCAAGTGGGAATT 	
   1273341	    36	 100.0	    30	....................................	TTGTGTTTTATGCAATTCCAAGTGGGAATT 	
   1273275	    36	 100.0	    30	....................................	AATCGTTCGCGCTAAGAATTGCAATTGTTT 	
   1273209	    36	 100.0	    31	....................................	ATTGTCTGGTAATGATAGCGCAAAGTATGTG	
   1273142	    36	  83.3	     0	T.............................TG.TGA	|                              	
==========	======	======	======	====================================	===============================	==================
        11	    36	  98.2	    30	GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	                               	       

# Left flank :   TTTTCATAAAGAAAAAGATGGAAGCTATTGGGTTGAATTTCCGGGTTTTGGTGGTGGAACAGAAGGAAGTGATGTCGAAGAAGCAATGAAAAATGCTCGTGAAATGTTAGAAAATTCACTAGCTGCTTACTTAGATGAGGGACTAACGCTGCCGAAAGTTATCGATATGAATGAACTATCAGTTTTTGACGGGTTTATTTCTTTGATTCAGGCAGATCTGTCTCCTTAGTTAAAAAGTTCGAAAGCTATTCGAAAAAATGTTACAGTTCCAGAATGGTTAGTCAGATTAGTTGATCGTGAACACATCAATTATTCAGAAGTTTTAACCCAAGCTTTGGAGAAAAAATTGCAACTGTAAATTATATGAATGCTTAGAAACATTGAAATAACGAGGCTTTTAAGGTATAATAGAGCTAACATGAAGGAGCTATTCGAAGCTGAAGTCTGGCTGAGACAAATGGCGCGATTACGAAATTTCGTGAGAAAAAATAGTCCACGAG
# Right flank :  TTTTTTTATCCATGAAAATCAACCAAAACTTTAGTGAAAATGTCTTTCAACGTTTTTCAAAAATTTACTTTTATGGTAAAATTGAAAGTGAATTTATTTAGATAGGTTGGATTGTTTACATGGAAAAAACTTTCTTTATGATTAAACCAGATGGTGTGAAACGCGGACTTGTTGGTGAAGTATTACACCATATCGAACGTCGTGGTTTCAAAATTGAAAAATTGGAAATGCGTATGGCAACTCCAGAATTGCTAGAAAAACACTACGAAGACTTAGTTGACCGTCCATTTTTCCGATTAATCGTAGACTTTATGACAAGTGGTCCAGTGATTGCTGGTGTTATATCAGGTGAAGAAGTGATTTCTTCTTGGCGTACAATGATGGGAGCAACAAACCCTAAAGAAGCTCTTCCTGGAACAATCCGCGGTGACTATGCACAAGCACCCGCAGAAGGAGCAGCAACATTTAACATCGTTCACGGTTCAGATTCACCAGAATCA

# Questionable array : NO	 Score: 6.17
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:58.33%AT]
# 	Reference repeat match prediction:         R [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-0.20,-4.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [6-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [75.0-56.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.27,5.28   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
//