Array 1 1912077-1911385 **** Predicted by CRISPRDetect 2.4 *** >NZ_SCCL01000004.1 Mycobacterium tuberculosis strain M0006055-9 M0006055-9_contig4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =============================================== ================== 1912076 29 100.0 42 ............................. GCCCCGTGGATGGCGGATGCGTTGTGCGCGCAAGTGTCGTCA 1912005 29 100.0 47 ............................. CCGACGATGGCCAGTAAATCGGCGTGGGTAACCGATCCGGGTCGTCA 1911929 29 100.0 45 ............................. TAGTACGCCATCTGTGCCTCATACAGGTCCAGTGCCCTGTCGTCA 1911855 29 100.0 42 ............................. CTGACGGCACGGAGCTTTCCGGCTTCTATCAGGTAGTCGTCA 1911784 29 100.0 43 ............................. CCTCATGGTGGGACATGGACGAGCGCGACTATCGGGGTCGTCG 1911712 29 100.0 44 ............................. TGGACGCAGAATCGCACCGGGTGCGGGAGGTGCAGCAGTCGTCA 1911639 29 100.0 47 ............................. GCATATCGCCCGCCACACCACAGCCACGCTACTGCTCCATGTCCTCA 1911563 29 100.0 47 ............................. ACACCGCCGATGACAGCTATGTCCGAGTGACATCCTCCCAGTCGTCA 1911487 29 96.6 45 ...........A................. TTGAACCGCCCTTCGCGCGGTGTTTCGGCCGTGCCCGAGTCGTCA 1911413 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= =============================================== ================== 10 29 99.7 45 GACCCAAAACCCCGAGAGGGGACGGAAAC # Left flank : TTCTCACTTGTCTACGAGGTCTCCTTCGGCACCCCCGGCGAGGAACAGAAGGCGTCTCTGCCTTCCTCCGATGAGATCATCGAGGACTTCAACGCCATCGCGCGCGGCCTGAAGTTGCTCGAACTCGACTACCTCGGCGGCAGCGGAACCCGTGGCTACGGGCAGGTCAAGTTCAGCAACCTGAAAGCCCGCGCCGCAGTCGGCGCCCTCGACGGTTCTCTGCTGGAGAAGCTAAACCATGAACTCGCGGCTGTTTAGGTTCGACTTCGACCGCACACACTTCGGCGACCACGGCCTCGAGTCGTCCACGATTAGCTGCCCCGCGGACACCCTCTACTCTGCGCTTTGCGTTGAAGCGCTACGGATGGGTGGCCAGCAGCTGCTTGGCGAACTCGTTGCGTGCTCGACGCTGCGGTTGACCGATCTGCTGCCCTATGTGGGGCCCGATTACCTGGTTCCCAAGCCCCTGCACAGCGTTCGGTCCGACGGCTCAAGTATGC # Right flank : TACGACGACTGGGTCGCCACCGCGTCTGTTGACCGGCATTCAGGATGAGCATGATGGCGGCGTTGACGGTGAGGACGTTTGGTCATGAAATGACCCCGCCGGGAGATGTCCGGCGGGGTCGGTGGTGTTCGGGGTGTCGGTGTGGTGTTCAGTCTGCCGTGACTTCGGCGATGGCGGTGCGGGTGGTGGATTCGTCGACGATGGCCTTGTCGGCGGCGAAGGCGGCGACGAGGGCTTGCAGGGCGAGGTTGTTGACCGCGCGGGGGTAGCCCCGGCTGGTCTGGTGGATCAACCCGATGGCGTCGTCGGAGAACAGGGCATCGTCGCGTCCGGCTAGCTTGAGGTGGTGGCGTAGGTAGCTGCCGGTGTTGGTGTCGGTCATGGGCGGCATGGCATATCGGAGTCCGATGCGCTGGTCAAGCGCGGCGAGCACGCCGAGTTTCATCCGCCGCCGCAGGGTGGGTTGGCCGATGAGCAGGCAGGCGAACGGGCTTGACGAG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GACCCAAAACCCCGAGAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.40,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.15 Confidence: HIGH] # Array family : NA //