Array 1 253337-254526 **** Predicted by CRISPRDetect 2.4 *** >NZ_KI515759.1 Corynebacterium sp. KPL1818 addTX-supercont1.2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 253337 29 96.6 32 ............................G CGCAACGCCTCCCACCTCACCTACAACGCGAG 253398 29 100.0 32 ............................. GCGGCCAAACCAGACAAAATCACCGTCGAAGC 253459 29 96.6 32 ............................T GACCAGCACATCATCGTCAGCGCGATGCGCCA 253520 29 96.6 34 ............................A TACCTGCATAGTGGCCAACTTTTCCGCATCGGGC 253583 29 100.0 32 ............................. AAGTCCTGTGAAGTCAGCTCGCCCGAAATTCA 253644 29 96.6 32 ............................G CAGGAGCAGATTAATGAGGCGAACGTCAAGAT 253705 29 100.0 32 ............................. CCGACGCGGCCCGAACCGTATTCGCCAAGCTC 253766 29 100.0 32 ............................. CATCGCGGGCTTCCAGGCTGATTTCTGCCGAC 253827 29 100.0 32 ............................. TCGACACCACCAACCAGCAGGCCCCGGCTACG 253888 29 100.0 32 ............................. ACCCCGCCGGTCGCGGCCTTGGTGCTGCCATA 253949 29 96.6 32 ............................G CCGCCATCCTCGGCAAACTCTACGAGGTGCAT 254010 29 100.0 32 ............................. ACCATAAATGTGGGGGATTCGCACCAGTCAGA 254071 29 96.6 32 ............................T CAGATGGCACCGCTTTAGAAACTAAAGACGGC 254132 29 96.6 32 ............................A GAGGGTGCCCCGGTGCTCTTCCGAGCGCGGCG 254193 29 100.0 32 ............................. CTCGGCCAATTCGGCCTGCTGCGTATCCCCTT 254254 29 96.6 32 ............................G GATTCCATCATGCTTGACATGACCGTAGATGA 254315 29 100.0 32 ............................. CGTACTGCCAAATAGCGGGCTTCTGATTACCG 254376 29 96.6 32 ............................G TTCCCACAAGGGTAGACCATTCTCATCAGCCA 254437 29 100.0 32 ............................. CGTCACCGCCTGCGCCAGAAGAACGTCCCCCA 254498 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================== ================== 20 29 98.5 32 GTGCTCCCCGCGTGAGCGGGGATGAGCCC # Left flank : CGTTTCTTCCATATCGCGGAAGAGATTCCGCAGCTGCCGACGGTTCTCTGGCGCCAACTCTTGGCCGACCTCGCTTTCTAAAACTTGCTTAATCCACTGGTCTAGCCACGCGCTGCGTTCTCTATCCATGAGGTATGAATAGAATCCGCGGAAGCTGCGCCCCGCGTCCGATTCCGCGATGTGGTCTACACCGCTAAAGATTTCCTCGAGCACTTCGCCGCGGTAACCTTCTGGATCCAAAAGCTGTCGGCGCAATCGGTGATTGAGGGCTTCAAGTTCGTGGCGCACCCTGGCGAAATCGCTTGGCACCGCCATAGCCATGTTCAGCACGTCTTGGACGCGCTCCTCGGTCTCTGCCGCAGTCAGTCGTTCAAACTGCCCCAGGTGGGCCTTTTCAATTTCGCGGTCAATGCGGTCTCGCTCCGCCTCTAAGCTGGCGACGCGGCTCGAAATATCCTCATTTGTATCTCGCGCCAAGCGCTGCAGAGCCGAGCCAATAG # Right flank : CCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCAGTGCTCCCCGCGTGAGCGGGGATGAGCCCCGCCGATAAGGCCACCGTCACCACCGTTGTTAGTGCTCCCCGCGTGAGCGGGGATGAGCCCCCTAAACTGGTGGCACCTCACTTTAGTGAGGAGTGCTCCCCGCGTGAGCGGGGATGAGCCGCCCGTTACGGCGCATCATCGATTGGCGAAGCGGTGCTCCCCGCGTGAGCGGGGATGAGCCCAAGACAACCCTCGCACTCTCTCTCGCCACCCTGTGCTCCCCGCGTGAGCGGGGATGAGCCGTCATCTCCGCCCTCTACGCCAACCCTGAGACCGTGCTCCCCGCGTGAGCGGGGATGAGCCCATTCAACTGCCAACCGGGATTC # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGTGAGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGTGAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [43.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 254731-255675 **** Predicted by CRISPRDetect 2.4 *** >NZ_KI515759.1 Corynebacterium sp. KPL1818 addTX-supercont1.2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 254731 29 100.0 32 ............................. CCTAAACTGGTGGCACCTCACTTTAGTGAGGA 254792 29 96.6 32 ............................G CCCGTTACGGCGCATCATCGATTGGCGAAGCG 254853 29 100.0 32 ............................. AAGACAACCCTCGCACTCTCTCTCGCCACCCT 254914 29 96.6 32 ............................G TCATCTCCGCCCTCTACGCCAACCCTGAGACC 254975 29 100.0 32 ............................. ATTCAACTGCCAACCGGGATTCTTATGCAGCC 255036 29 100.0 32 ............................. CCGAGTAGGGCAAATACCAGGGGTTTTAAAAG 255097 29 100.0 32 ............................. TGAATTTTCTGTTCACCCCACCGGCGCTCTTA 255158 29 96.6 33 ............................G TGGTCGCGTAGCAATTTCACGCGGCCAATATCA 255220 29 96.6 32 ............................G GTCGTGAGCTCGAAGAGCACGCCGCCTCCCGC 255281 29 100.0 32 ............................. GACCGATAAACTTATCTCGACCGGTGCTGATT 255342 29 96.6 32 ............................G TCCGGCTCGACCGACGACGAGGACGACGAGGA 255403 29 96.6 32 ............................G GCGACGATGACGGCCGCACCCCGGATTACATC 255464 29 100.0 32 ............................. GATTTTGACACCGCATGGCATGCGGGTAATCA 255525 29 96.6 32 ............................G CTTCGCACCCCACCGGCCGAAGGTGTTCTTAT 255586 29 96.6 32 ............................T CATTATGTACGCCCTTACTACCCCTAATAAGC 255647 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 16 29 98.3 32 GTGCTCCCCGCGTGAGCGGGGATGAGCCC # Left flank : TTCGGCCTGCTGCGTATCCCCTTGTGCTCCCCGCGTGAGCGGGGATGAGCCGGATTCCATCATGCTTGACATGACCGTAGATGAGTGCTCCCCGCGTGAGCGGGGATGAGCCCCGTACTGCCAAATAGCGGGCTTCTGATTACCGGTGCTCCCCGCGTGAGCGGGGATGAGCCGTTCCCACAAGGGTAGACCATTCTCATCAGCCAGTGCTCCCCGCGTGAGCGGGGATGAGCCCCGTCACCGCCTGCGCCAGAAGAACGTCCCCCAGTGCTCCCCGCGTGAGCGGGGATGAGCCCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCAGTGCTCCCCGCGTGAGCGGGGATGAGCCCCGCCGATAAGGCCACCGTCACCACCGTTGTTA # Right flank : CCGGCGGGCCGCTTTCTGTCCCATGCCCACGAGGTGCTCCCCGCGTGAGCGGGGATGAGCCCNNNNNNNNNNGTGCTCCCCGCGTGAGCGGGGATGAGCCCCGGCGGGCCGCTTTCTGTCCCATGCCCACGAGGTGCTCCCCGCGTGAGCGGGGATGAGCCCTGGAGGTATAGTTCATTCCGGCGGCGGATGCAGTGCTCCCCGCGTGAGCGGGGATGAGCCGTAAAGGTCACCTGGGATATCGACGAAGACGACGTGCTCCCCGCGTGAGCGGGGATGAGCCCTCGCCGTCCGGGAGGGTCTCGATGTAGGTGGTGTGCTCCCCGCGTGAGCGGGGATGAGCCGGGAAACCATGAACTACAACATTCAACCAAGCTGTGCTCCCCGCGTGAGCGGGGATGAGCCCATCGAAGCAATCGCCGACCAAGTACTCACCACGTGCTCCCCGCGTGAGCGGGGATGAGCCGTCACGTGGGATATCGACGAGGACGACCCGGTAG # Questionable array : NO Score: 6.00 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.83, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGTGAGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGTGAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [33.3-26.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 255808-256913 **** Predicted by CRISPRDetect 2.4 *** >NZ_KI515759.1 Corynebacterium sp. KPL1818 addTX-supercont1.2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 255808 29 100.0 32 ............................. TGGAGGTATAGTTCATTCCGGCGGCGGATGCA 255869 29 96.6 32 ............................G TAAAGGTCACCTGGGATATCGACGAAGACGAC 255930 29 100.0 32 ............................. TCGCCGTCCGGGAGGGTCTCGATGTAGGTGGT 255991 29 96.6 32 ............................G GGAAACCATGAACTACAACATTCAACCAAGCT 256052 29 100.0 32 ............................. ATCGAAGCAATCGCCGACCAAGTACTCACCAC 256113 29 96.6 32 ............................G TCACGTGGGATATCGACGAGGACGACCCGGTA 256174 29 100.0 32 ............................. GTCATTGCGGACGTGCAGCGCCGCCAGCCGCA 256235 29 100.0 32 ............................. CGGTCAGGCTTGACCCCAAGCAGGTCGAGATA 256296 29 96.6 10 ............................N NNNNNNNNNA Deletion [256335] 256335 29 100.0 32 ............................. CGGTCAGGCTTGACCCCAAGCAGGTCGAGATA 256396 29 96.6 32 ............................G GAGGCTATTAGTGCTGAGTCGTCGGCGCGGCG 256457 29 96.6 32 ............................G GTTGGTGTGCGACTTGAAGTGAGCATGATTGC 256518 29 96.6 32 ............................T CAGTATCAGGAATTTGCCGCCGTCATAGGCTC 256579 29 100.0 32 ............................. GGTTTGATGATGGCCGGGGGCGAGACTCATCG 256640 29 96.6 32 ............................G TGCCGGGCCGTGGTGTGGCGAAATTCTACACG 256701 29 100.0 32 ............................. CAGCCGTCGCCGCCGCGGCCACCAGGGGTGTA 256762 29 96.6 33 ............................G TCTACAACCCTCCCAAGGAAGACGTGGTGCCGG 256824 29 100.0 32 ............................. GAGCTGTACCTGCAACTCCAGCAGAAAACCAC 256885 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 19 29 98.4 31 GTGCTCCCCGCGTGAGCGGGGATGAGCCC # Left flank : CCGACCGATAAACTTATCTCGACCGGTGCTGATTGTGCTCCCCGCGTGAGCGGGGATGAGCCGTCCGGCTCGACCGACGACGAGGACGACGAGGAGTGCTCCCCGCGTGAGCGGGGATGAGCCGGCGACGATGACGGCCGCACCCCGGATTACATCGTGCTCCCCGCGTGAGCGGGGATGAGCCCGATTTTGACACCGCATGGCATGCGGGTAATCAGTGCTCCCCGCGTGAGCGGGGATGAGCCGCTTCGCACCCCACCGGCCGAAGGTGTTCTTATGTGCTCCCCGCGTGAGCGGGGATGAGCCTCATTATGTACGCCCTTACTACCCCTAATAAGCGTGCTCCCCGCGTGAGCGGGGATGAGCCCCGGCGGGCCGCTTTCTGTCCCATGCCCACGAGGTGCTCCCCGCGTGAGCGGGGATGAGCCCNNNNNNNNNNGTGCTCCCCGCGTGAGCGGGGATGAGCCCCGGCGGGCCGCTTTCTGTCCCATGCCCACGAG # Right flank : CCGCAAAAAGCGGAGCACGTGGCCAATAAAAAGGTGCTCCCCGCGTGAGCGGGGATGAGCCTGAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 6.07 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:-0.10, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGTGAGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGTGAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [26.7-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.64 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //