Array 1 289659-289932 **** Predicted by CRISPRDetect 2.4 *** >NZ_WPBY01000013.1 Streptomyces sp. NRRL B-1677 B1677_XRG_trimmed_paired_contig_13, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 289659 29 100.0 33 ............................. TCCGAGGGACTGGACTACGCCCTGACCGTCGCA 289721 29 100.0 32 ............................. CGCAAGGGCCTCGACGGGATGATCCAGTTCGA 289782 29 100.0 32 ............................. GAGGCGATCGTCGCCGCCCTCGCAGAGCTCCG 289843 29 100.0 32 ............................. GGCGGCTGCGAGGAGCGGGCATGGACGTGTAA 289904 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 5 29 100.0 32 GTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : CACTGAACCACCCAGCACCGGCGGCCCGGACCCGCGGGCGGAGGAGGCTGGTCCGTTCCCCCGTCGCGCGGGGAGCAGCCGCCAACCATTCGACGTGGGCCCCGCCGGGAGCCCTGGTTGTCGAGTGCATTCCTCGCGCTCGCGGGGGATGGTCGTGGCCGCAACGGTTGGTGGGAGTGCGCGATGGGCGTTCCCCGTGTCCGTCGAGTAGCCCAGAGGGCTCCGACCATACGGCTGCCGGGTGCTCCGGCCCGCGTGATGATGGGAGGCCCTCCGCTCTCACGCGAGGGGCGGGCGGATTGCCTGCCCTTCTCGCTGTGGCAGGGCGCGAGCCTTGGAGCCTGGGCTTTCTGGATGAAAGCATGATTAATATGCTGGCATGCTTGGGGCGTTGGGTTGTGGGCGGGTCGTTCCAAGGGTCTGATAGCTGAGGTATGTCCGAGTTTTTGCAAGTGAGTAAAAACTGGCCTGGGCCCCACTAAAAGGCCTGGTCGCCGAGT # Right flank : CGCACTCGGCTTCCGGGGCGTCGCCGTCACGCGGTGCGCCATCCTCCGTTGTGGAGGCGGGAGCAAGGACGAACAGGATGCCGGGCGGGGACCCCCCTCCCGGCGTCGGGAGTCTTGGTCACCGGGCAATGCGTCGGGCTGCTCCTCCGCGGGTACGGAAGACCCGGCCTTCCTGCTCGTTTCGGGCATAGGTCTCTCGTGCCGCTGCGTACGGTCGTCGACATGCGAGATCTGCTGCGCTTGTTCAGGAGCTTTGGCTACAGTGAGCGAGCGGGGCGCTGACAGAGGTGCCCTCAAACCCTCCCCGCATAACCGGGGTTGCTCCTTGTGTCTGTGAAGGACGGTTCCTGCTCCCCGTATTCACGGGGATCGACTGCCGGGATGGCCCGGCCTCGCGTGTCGTGCTCAACTGTGTGTGTTGAGGGTCGCTTAAACATCGTGCGAGAGGCCCAACGTGCTTGAACCATAAGGGAGTCGAGGCAGCAAGAGCTGTGGCACCA # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [46.7-25.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 300601-301178 **** Predicted by CRISPRDetect 2.4 *** >NZ_WPBY01000013.1 Streptomyces sp. NRRL B-1677 B1677_XRG_trimmed_paired_contig_13, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 300601 29 100.0 32 ............................. ACTCCACCGACCTCATTCCCGCCTGCGCCTGC 300662 29 100.0 32 ............................. TCCGTCATGTCGAAGCTGGGGTCAATCTTGCC 300723 29 100.0 32 ............................. GCCCGGCCGCCGCCGTCGGCGGGCCGGTAGTC 300784 29 100.0 32 ............................. GGCCAGCAGCATCGCCCGACGAGCCGCGGTGT 300845 29 100.0 32 ............................. GGCTTGGCCCGGTGCCCGAGCCACTTCAGGAG 300906 29 100.0 32 ............................. TGCTTGGCGAGGATGCTTCCCGGGGTGAACGG 300967 29 100.0 32 ............................. GACGAGTGGCCCATGCTCGCAATCGAGGACCA 301028 29 100.0 32 ............................. CGGGACTTCCTCAGCGAGGCCGAGGCGGCGCC 301089 29 100.0 32 ............................. GAATACGGTACGCAGTTCCGCAAGGCGGGATT 301150 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 10 29 100.0 32 GTGCTCCCCGCGCACGCGGGGATGATCCC # Left flank : GCGAAGCGGCGCCGTTTCGGCAATCGGCAAGGGGGAAATGGGTTGATTGTCTAAATCCATGGAAGCGTGCGGCACGTGGGGGCCCGGAGAGACATATGCCAACACGGGCGACTTGGTTGCTCCCCGTGTGCGCGGGAACGGATCCGCTTCGACAACCTCTCCAAGGAGGGAGGGTGAGTGCTTGCATGATTGCGGCGCTGCGATCTGCTGCCGAGCGAATACCGTGGCGTCAGGTCGCCGTAGTGCGCTACAGCCTTCCGCCGGAGTGAGTGATTCTCCGGTGGGCCTGAGGGCGGCCGACGGTGGTTGTGGGCGTCGGCATAAGCACACAGGCCGATGAGGATATAGGGGGAGGTGTAAGGGCCGGTGACCTCCAGCGAAGGGGGCGAGCTTCGGGAGCGTGAGTGATGACGTATTTATCTATAAGGCGTGGCTTGTCTGACTCTCGTCAAGTGAAGAAAATGGCTGCCTTTCCGAGGCGAAGACCCAGGTCAGGAAGA # Right flank : CGCTCACTGTCCCTGGAGGACCGGGTGCTGGTGGCGATGTGCTGCCGCACGAACGTGTCCATGCCGCAGCTCGCCCCGCTGTTCGGGATCTCCCGGCAGCGGTTGGCCGGATCGTTAAGCGACACGGACCGCTGCTGACCCTCGCTCCCGCCAATCGTGGGCCGGGCAGCGATGACGTGCTCGTCGTGGGCGGAATGCTGGTGCCTACGCGGGGACCAGCGTCGCCCACATGCACAACCTCGCCCTCGTCGGCTGACCCGAGCCCAGGACTCCATAACAGCCGTGGTGTACAGCACAGTTACGTAGTTACGAGGAGATCCTTAGTCCACTGCCGGGGCCGGTTCTCGGGAGGTGGGCGCGGTGGTGTCCTTGTCCTCGCTGGGCAGCGGTTCGGGGAGCGCTGCCCAGGCCGGCGAGGTGAACATGCCCGTGTCAGCGCCGCATTCGGTCAATGCGCGCAGGAAATGCTCCGGCTTACCGTCCACACCATGGATCACCTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCACGCGGGGATGATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCACGCGGGGATGATCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [46.7-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 15570-15236 **** Predicted by CRISPRDetect 2.4 *** >NZ_WPBY01000062.1 Streptomyces sp. NRRL B-1677 B1677_XRG_trimmed_paired_contig_62, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 15569 29 100.0 32 ............................. CCGGTCTTCGTCGTCACGTGCACGCCGGGGTG 15508 29 100.0 32 ............................. TTCCCGGATGAGTTCATGTGGGAAGTGATCGA 15447 29 100.0 32 ............................. GACGAGAACGGCGTGCCGATCTCGAGCTACGG 15386 29 100.0 32 ............................. ACGGGCGGCACCGCCAGCGCCTTGAGGGTCTC 15325 29 96.6 32 ..A.......................... ACCCGAGCCACCGGCCAATGGCGGGGCAAGGC 15264 29 82.8 0 A.......G...T............C.T. | ========== ====== ====== ====== ============================= ================================ ================== 6 29 96.6 32 CTGCTCCCCGCGCCTGCGGGGATGGTCCC # Left flank : GCTCCGTGAGGAACTCCGGAACAACCCGTGCGCGATCTACCTGGCTGAACTGGTCGCTGCCTGGACCCGCGTGCCCGGCTGACTCACGCTCGATGATGTCGCGGGGGAGAGCACAAGACCGACCAGGAATTCATCGTCGACCCCGCCCTGGCCCGTACGGACAACCCAGGCCTCGACAAAGTGGCGCAGGGCGCGCTTACGCGACCGGTTCGGTTCATGGCTACCCCAGGTGCCACCGACGCCCGCCTGCGCGGTCGGCTTGTCCGCGAGCTCGTGCTCGAGCCGGCCGGGGATGTGTTCGAGGGCCTCGTTGCGCTCGTCGAGGATGCGGGCATGGACCAGAAGTTGGCGGATGTAGCGCGCCGGCTCCAGTTGGGCGAGAACTCGTCCAGCAACTCGCGAGTGAGTTGTCCTGAAAGCCCGGTAGATGCGGCTTGTCTGATTCTTTGCAAGTGAGTAAAAACAGGCCTAGGCTTTGCTAGAAGCCCTGGTCGTCGAGT # Right flank : TATCCGGCGAACAGGGCCAGTTGATGGCAGAGTTGCTGGGCGTGAGCGCACAGGAGGAAACGGGCCCGTACGGCGATGACGGTCCGTCCCTCACGGCGGGCGGGCCGTCAGGTGAGGACACCGACGCGGGCGGCGAGAGCGCGTAGCTCGGTGGTCGTCCGCCCCGAGACCAGCAGTCCGGAGACCAGCGACTTCACCGCCGGGCGGGCGTGGGTCTCCTCCGGGGCGTGGTGTTCGGCGGCCAGGAGTGCGCGGATGCAGTCGTCCCGGCGGCCCGAGCGGGCGAAGGCGGTGGCGATGTCGGTGTAGTAGCGGGCCCGCCGCTCGATGCTCGGCAGATTCCCGGGCGCCACCGCCCTGGCCGCGGTGAGGGCGGCGGAGGGGTCGCCGGCGGAGTTCTCCGCGGAGACCAGGTGGAGCTGGACAGTGGCGGGGCTGAACCCGCCGCCGTGGTTCCGCAGCACGGCGGCCGGGCCGAGTTCCCGGGCGATGGCAGCGGC # Questionable array : NO Score: 6.09 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCCTGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCGCCTGCGGGGTTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 18919-19068 **** Predicted by CRISPRDetect 2.4 *** >NZ_WPBY01000051.1 Streptomyces sp. NRRL B-1677 B1677_XRG_trimmed_paired_contig_51, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 18919 29 100.0 31 ............................. ATCGACCCCACCGGCCCCGACCTGCAAGGGG 18979 29 100.0 32 ............................. GTCCAGCCCAACGCGCGCCAGCCCATCCCGGG 19040 29 86.2 0 ..............C......G...GT.. | ========== ====== ====== ====== ============================= ================================ ================== 3 29 95.4 32 CTGCTCCCCGCGCCTGCGGGGATGGTCCC # Left flank : CGGGCCCGCAGCCACGCCCAGCGCGGTCAACCGGGAGGCCCGGAACGGCTGGTCGAGCCGGACCGGCACCGCTACGGCCGACAGCCCGGCCGCCCTCGTAGCCGCCCCGCTGATGCCGCTTCTTGAGCTGAGGATGATGACTACGGGTACTTGGCAAGCCTCGCCGCCCGGCTTGAGGCATGGCCGCTTCTTGAACGGCTCGTTCATAAGGCCGAGGAGAGGAGTAACTCCGACGTTCGTGAGGTTGCGCGTCACTACAACGAATCCTACGGACCCATGTGGACAACACGGCCGAGGCTGGCCAGTTCGAACCTGTGATGTTTCGGTGCCGCCTTGTTCACGACAAGATGGGCGAGGGACCCCCGAGCCGCCGTCAGTACCCTGTTGAGGGAGTGAGGGTGAGCGAATTATCCCGAGAATCTGATAGATGTGGTCTGTCTGATTCTTTGCGAGTGAGTAAAAACCGGCCTGGGCTCTGGTAAAAGCCCTGGTCATCGAGC # Right flank : CGGCATGGGGGCTTAACAGGTTGTTTCATTTGG # Questionable array : NO Score: 5.13 # Score Detail : 1:0, 2:3, 3:0, 4:0.77, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCCTGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCCTGCGGGGATGGACCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.00,-9.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 160017-159866 **** Predicted by CRISPRDetect 2.4 *** >NZ_WPBY01000016.1 Streptomyces sp. NRRL B-1677 B1677_XRG_trimmed_paired_contig_16, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 160016 29 100.0 32 ............................. TCTCACGAAGAGGCAGGTCCGCCATGGAGCGT 159955 29 100.0 32 ............................. GGGGGCTGGTGGTAGACGCGGCCTAGGCTGTC 159894 29 96.6 0 .........................T... | ========== ====== ====== ====== ============================= ================================ ================== 3 29 98.9 32 CTGCTCCCCGCGCCCGCGGGGATGACCCC # Left flank : CGGGGCCCCGGTGCTCGTCCCCGACGCCGACGGCAGGCTCGAAGGCTTCGCCCTGTCCCCCGGCGGCTCCCCGCTCAGCCACCGCCGGCAGGTCACCTCCGGCGGCTGGGATGCCGCTGACGACTTCGGCGAGCCCGGCGTCCGGCTCGCCGCCCCGCCGACAGCTGTGGCCGACGCCACCGGACGGATCCACGTCTTCGCCGTCACCACCGAAGGCCGGCTGCGCACCCGTGTCCAGGCCCGGCCCGGCGGCTGGCTCCCATGGACCGCATGCGGCGACCGCCCGGTCGCCCCCGTCCCGTCGGGCAGCCCCGTGTACCGGGCCTGAACTCGTGGTGCAGTGCCGCGGGCGCGCATTGCGGCCGACAGCATGCCGCCGGGGAGGCGCGGCGGGCTGTGACGTGCTGCATCCTCTTATCTGCTGGATGCGCGCTTTGCCGGAATCTCGGAAAGTAGTCAGAAAACGGGGTGAGCGTGGAAGGATGCCCACGTCACGAACT # Right flank : CTGGCGCGACGCTGAGCCTGCCCGTCCGTTGAGGAGGACCGCTCGGACCTGCCGGCCTCCTGCCACCGGGAGTCGCTGCGGGTGGCGGATGAGCTGGGTGCGCGGACAGCGGCGTTCCCGGCGATCTCGACGGGCGTCTACCGCCGGCCGGTGGAGGACGCGGCGGCAGGCGGAAACGAACGTGGAGGAGGTCCGCTTCGTCCTCTTCGACGAGCGGGCGTACGAGGCGTTCGCCGCGCAGGCGGATCTACCGCTCTGCTGACGACGGCGGTGACGCGTCGGTGGCCCGGGCCGTGGCGAGGGCCGCAAGCGCCAGTACCGCGGCCCCGGCTAGGAAGGGCGCGCGCAGTCCGGCCAGTTGGGCCAGTACGCCGCCCGTGGCCGCGCCGAGGGCGCCGGCGCCGTTGCTGACGAGTTGGTACGACATGCTGACCCGGCCCAGCAGTTCCGCGGGCACGAGCTGCTGGCGCAGCGTCACCGCCGTGATCTCCCAGATCAGG # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCCCGCGGGGATGACCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCGCCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [25.0-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 403145-402570 **** Predicted by CRISPRDetect 2.4 *** >NZ_WPBY01000007.1 Streptomyces sp. NRRL B-1677 B1677_XRG_trimmed_paired_contig_7, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================= ==================================== ================== 403144 25 100.0 36 ......................... CCCCCCGTAGAAGCGCGCGTTGCCGTCCACCCCGCC 403083 25 100.0 36 ......................... CCCCGACGGGCGCACACTGGCACGGGAGTTCTCCCT 403022 25 100.0 36 ......................... CCCAACTTGCAGCCGATATTCTCGGCCTTGTCGGAC 402961 25 100.0 36 ......................... CCCCCGCCTCATCCCGGTCTTCACGCCACGGGAATA 402900 25 100.0 36 ......................... CCCCTGGGCGTACGGCGACGCGGCGAGCGGCGGAAG 402839 25 100.0 36 ......................... CCCCGAGGAAGCGACGTACCGGTCACACAGCACCGC 402778 25 100.0 36 ......................... CCCCTACTGGCCTTTCCTCGACCCCGCCCCGTCCCT 402717 25 88.0 35 C..........A.A........... CCCGACGACCCCTACTGCCACGTCGACCAGAACAC 402656 25 88.0 36 C............A..........C CCCCTCTTCGTCCTGCTCTACCTCGGCCACCTGGCC 402595 25 96.0 0 ........................G | G [402573] ========== ====== ====== ====== ========================= ==================================== ================== 10 25 97.2 36 ATGCTCCCCGCGCCCGCGGGGATGA # Left flank : GAGACCATGGGGTGGGCCTCGGGCTCCGAGGCGGGCAACAGGCTGTGCCCGTCGCCTGAAATCTCACTCGCCACTCACTCGCGATCCGCGGCGGGCAACGACAAAGCCCCGGACTCAGCGGGACTGAGTTCGGGGCTTCATGCTCGGCACTTCAGCAGGTCACCGGTCAAGTCTGACCGCTCACTGCGAAGTGCCCCCGGCAGGATTCGAACCTGCGCACACGGCTCCGGAGGGCGTGACTTCCTAGGGGGCGAAGGGGTCGCTGACCTGCGAATATCGGGGGAAGGGCTCTGGCGGGCGGGGATCTCACTCGCTGCTCACGCGTGGGGTGGGGTTTGGGCCCTGGGTGCGCCCCTTGTTGGCGACCGGAGGTCGGCGGTGCGCAGGGCGCCAATTGTGTTGTACTTCATTCGCGTATGGGCTGGATGCGTGCTTTGTCGGAATCTCGGAAAGTGGTCAGAAAACAGGGTGAGCGTGGAAAGATGCCCAGGTCACGAACT # Right flank : CCCGGGGGCCCGATCAGTCGGAGAAAGGTGCGCTGCTCCCTGCATGTGCGGAGGTGGTTTCGACATGCGCATCCCTGGCCGTGATCAGTGGATACGCCCCTTGTTCAGGGGTGGTTCGTGGTTCGCGTCGTCATGGACGCGGCTGACGCGAGAGGAGGTCGGGCGTACCGTATGTCCGAGGAAGTGACCGATCGCGAGAGGCTCGGGCCATGAGCGAGCAGAGCTGGACCATCGAATCCATTTGCGAGGCGCTGGGCAGCCCCGTGCTGAGCCAGAGGTTCCTGGGCGAGATCAACCGTGCGCCCGCACACGAGCTGCTGACCGTCTTCGCTAAGTGGCGCACGATCGCAGCCGGCGTGTCCGGCGCAGTTGAGCGCGGCCGCACGCTTGCTGAGACGGAGGAAGCCACGGGCGAGATCCCGGGGGACTGGGTGGACATGACCGAACGGATCCAGGCCGAAGCTGCTGCCGCTCGTGGCCGAGGCGCCGCCTGATGGGCT # Questionable array : NO Score: 6.12 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGCTCCCCGCGCCCGCGGGGATGA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCGCCCGCGGGGATGG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //