Array 1 58265-58750 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAAABX010000004.1 Streptococcus pyogenes strain iGAS226 NODE_4_length_144763_cov_82.2702, whole genome shotgun sequence		Array_Orientation: Unconfirmed

  Position	Repeat	   %id	Spacer	Repeat_Sequence          	Spacer_Sequence                           	Insertion/Deletion
==========	======	======	======	=========================	==========================================	==================
     58265	    25	 100.0	    40	.........................	GATGTTAAAGATTTAAAAGATATGATGAGAGGAATTTCAA  	
     58330	    25	 100.0	    42	.........................	GTGAGGTAAGAGAACTTAAAGATATTATGAGAGGTATTTCAA	
     58397	    25	 100.0	    41	.........................	TTAAGCTTGATTATATTATAATCCGTTTTAAAACATTTCAA 	
     58463	    25	 100.0	    41	.........................	GCAGATATTGTTACAAGTCAAGTCTATTGATGATATTTCAA 	
     58529	    25	 100.0	    40	.........................	TTTATTGACTTTTTAAACTTTTTAGAAGAGTGTATTTCAA  	
     58594	    25	 100.0	    40	.........................	TTTAAAAGTTATTTCAGATTTAAAAATCAGATAATTTCAA  	
     58659	    25	 100.0	    42	.........................	GAGGATGCAAAATCAAAATTAGATACTAAATTTAAATTTCAA	
     58726	    25	 100.0	     0	.........................	|                                         	
==========	======	======	======	=========================	==========================================	==================
         8	    25	 100.0	    41	TCCACTCACCCATGAAGGGTGAGAC	                                          	       

# Left flank :   TCTTAATGGTAATGAGGCCCATCTGATGAATCCCCAAGATAATGACCAAGGCTCCCAGGAAGGACCGAAACCATACCGCATAAAGGATATTTCCCAAAAAACCAGCCCCATAACCTAAAATCACAAAGATAGTGGATAACCCAAAAATGAAGGCTAAGGTCTTGACAATGCCATACCAATAGAGTTTTTTACCAAATATAGTAATCGTCTTTGAATCATCTGCATCCAGTAAAATACCTAAATAAACAGGAAGGACCGGAAAGATACACGGAGAGAAAAAGGATAACAAGCCTGCCCCAAAAACCGATACCATTAATACAAGTGATAGTGTCATAAATAACTCCTCTCTTAAGTTACCCTTAGTTTACCGAAAGCTAGTGGCGCAAACCATAGACTAGAACATGCAAAAACTTGAATTTGATACGCTATCAGATAAATGGTTGACTAAAGGCATGTAAAAACCCGACCTCATTAAAAGAGAGGTCGGATTCATCTTTCAA
# Right flank :  CTGCGCCAAATGACACAGTTTATAGAGAAACGGATGGCACACATAGAGGTGTTTTAAGCCTTTTTATCTCCATTTCGCTTCTTTTTTAAGTTATTTTTGCGCGAGCAAGCAAGGTTTTTCTGTGAAAGCTAGCTTCGCACAAGAGATTTTTACAATAATAAGACACCTTTATCTGGGTCATAGCTGTCTGAGCGACCAAGTGTTTCCACACGCCTCTGCCAATTTTTCCCCAATAAATAAAAGCGAATACTATCAGTTTTCTCATCAATGATTTGTGTTAAGCGGTGCTTTATATCCACAAATTCTGCGGGTGTCACAGAACATTCAAAAACAGAATTTTGAACACGTTGCCCATAGTCCACACAGAGTTTGGCAACATGACGCAATCTTTTTCTACCAGCAGGTGTTTCCGTATTTACATCATAAGTGACTAAAACCATCATATAACATCTCCTAAACCATAAAAGGTGGATAGCTTTCTAAATCTCCTCGTATGGCCT

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     TCCACTCACCCATGAAGGGTGAGAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [7,4] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  R [-4.70,-5.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: NA [61.7-56.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         NA [0.37,0.37   Confidence: NA] 

# Array family : NA
//