Array 1 2083866-2079200 **** Predicted by CRISPRDetect 2.4 *** >NZ_NJFD02000001.1 Mobiluncus mulieris strain FDAARGOS_303 scf7180000000010_quiver_pilon, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 2083865 29 100.0 32 ............................. TGACACGCGAGGACGAAGGAGAGCACCCGTGC 2083804 29 96.6 32 ............................G ACCTCGCGCGTGCGATTTTCGGATTTGCTAGG 2083743 29 100.0 32 ............................. CTCACGAGTCACCGTCTGCCAGTCAATCGGAA 2083682 29 96.6 32 ............................G CGCTCCGCGTCACAGCGGGGAATCCACCCGTT 2083621 29 96.6 32 ............................A AATGGCTCGCACCCAGCCCAGGTCGCCAGATA 2083560 29 100.0 32 ............................. CCGGTCGTAGTCGATAGGTCCTTTATGCGCGG 2083499 29 93.1 32 ...........................TA CCCTAGCCGCAGCCGCGAAAGTATCAAACCCA 2083438 29 96.6 32 ............................G CGCAGCCCCTAAATCCGACCGGATTTGCTCAT 2083377 29 100.0 32 ............................. CCCAGCGTGGAAACTGGGCGGGTAATAGCAGA 2083316 29 96.6 32 ............................G CGGAGCTTACCAGCCTGGACACCCCGGCAGCG 2083255 29 96.6 32 ............................T ATTGCAACCCACAGTAGGCCTTGGGTGAGTTG 2083194 29 96.6 32 ............................T CCGGCCGTGAGACGTGCCCTGGAGCCGCTGGT 2083133 29 100.0 33 ............................. GGGTTGGTGTGTGTCTGATATTATCCCGTTGCC 2083071 29 100.0 32 ............................. CCGCATTGACACACCACCCACCCACCGCATAC 2083010 29 96.6 32 ............................T TAGATATTGTCCGATATGATAGGGGTATAAAA 2082949 29 96.6 32 ............................T AGATATCGTAAGAACAAAAGGAAAGCCTCGGC 2082888 29 96.6 32 ............................A AAGCTATAGTTGCAGATTCTACTCTAGGGGAT 2082827 29 96.6 32 ............................T TAAAAATGGAGAAATGCATTTTAGTATGCCTA 2082766 29 96.6 32 ............................G TGAATCAGAATTCAAATCCGGCCGTGAGGCGC 2082705 29 100.0 32 ............................. TCAACTGTTTATGCGGCGTAAAACCGGGGCGG 2082644 29 100.0 32 ............................. ACCCGCCGGGGACTTTAGTCCCGAGCCGGTTT 2082583 29 100.0 32 ............................. TATTTTTTGTTTGCGTCATCACCCATATCGGC 2082522 29 96.6 32 ............................G CCGGAGGCGTGTTTCTCTACCGCAGCTCTTCG 2082461 29 96.6 32 ............................T TATCGACCGCACCTACGAATTCAACGGCACAT 2082400 29 96.6 32 ............................G CTGAAGCGGACGGGCTACCAGTCCCAAGACTA 2082339 29 96.6 32 ............................G CCCTGCATAATGGCCTTGCCCGCCGGTTCGAG 2082278 29 96.6 32 ............................G TCGGGCCGCCAAATTCCACCATGACTTTTACG 2082217 29 96.6 32 ............................T GCAGTGGATACGAGATTTAGATTTCATCGGAT 2082156 29 100.0 32 ............................. TGAAAAGGAGTTGATTACGATGACCACTTTAA 2082095 29 100.0 32 ............................. ACCCGCCAGGGACTTTAGTCCCGAGCCGGTTT 2082034 29 96.6 32 ............................G GCGGACTCGACACACCCGAAAATCTCCGCCCC 2081973 29 100.0 33 ............................. TGCTGGTCGATGATTCCCCGCGTGTATTCCTTT 2081911 29 100.0 32 ............................. CCCCTACACAGCCTTCAACACGCCCCGACGCT 2081850 29 96.6 32 ............................T AGCGGGTTTCTTCCTCAATATCGAACCAGATA 2081789 29 100.0 32 ............................. CCGTAATCCCGGTTTAACTCCCTCGACAGCTA 2081728 29 96.6 32 ............................T TTTCGTCTTGTCGCCTCCTTCGTATAACCGAT 2081667 29 100.0 32 ............................. AACAACAAGATCCAGCTGACTATCGAGGAGCT 2081606 29 96.6 32 ............................T GGTTGCGTGTGTGCGCCGCGTTGTCGTGGACA 2081545 29 96.6 32 ............................T CTGCTGGTGCACGTCCGGATACTGGAGGTAAA 2081484 29 96.6 32 ............................G GCGCTAACCGGGGATCTACCCTGCTACCCGTA 2081423 29 100.0 32 ............................. CGCCCCCCCTAGACTGTGGTCAGCTCTGGCAT 2081362 29 96.6 32 ............................G GAGCCAGTATAAAAACGCTTTTCCTGGATGCC 2081301 29 100.0 32 ............................. CTCGGCAAGCTGATTTTTCCTAGCCACCCAGC 2081240 29 100.0 32 ............................. CTCGGCAAGCTGATTTTTCCTAGCCACCCAGC 2081179 29 100.0 32 ............................. GGGTGGGGTTTCTTTGTCGTCTAGGATTAGGG 2081118 29 100.0 32 ............................. GGGTGGGGTTTCTTTGTCGTCTAGGATTAGGG 2081057 29 100.0 32 ............................. GGGTGGGGTTTCTTTGTCGTCTAGGATTAGGG 2080996 29 96.6 32 ............................A CGTGCAGATAGGCATTCATTTGTCGCCCTTGG 2080935 29 100.0 32 ............................. TGTGGATTGGGATTTCACGGCGCAAAAAGACA 2080874 29 100.0 32 ............................. TGTGGATTGGGATTTCACGGCGCAAAAAGACA 2080813 29 100.0 32 ............................. AGCAGGTTGCAGAGTTGCAGGGTGTATAATGG 2080752 29 100.0 32 ............................. CAGAATCGTGGTAGCTCCAGTTGTCGCAATTT 2080691 29 96.6 32 ............................T ACGCCCACCATATTCCTGCCATAACCTCAAAG 2080630 29 93.1 32 .......................C....G TGGCGTTTACGAGGTCGCGGGGGCTTTGACTA 2080569 29 93.1 32 ........T...................G CGGAAGCGGAACTAGCCGACCTGGAGAAGAAC 2080508 29 100.0 32 ............................. CTTGTTTATTTCCCCAGGTTGTAGGGTTTTGT 2080447 29 96.6 32 ............................G TTAAGGCGCGTGTTGAGGCGCTTAGTGGCGAG 2080386 29 100.0 32 ............................. GACCTGTATGTGGGCGGCGTACGGATTAACCC 2080325 29 100.0 32 ............................. TCGCACCGGCTCGCTGCGGTTGTCCGTGGTGC 2080264 29 96.6 32 ............................G GACACAACCAATGAAAAACAAAATCACCATCG 2080203 29 96.6 32 ............................G CCATCTCATCGGCCTCAAAATCCTCAGCGGAT 2080142 29 100.0 32 ............................. CAGCGGAAATACCCCTAAAGAAACCATCCAAG 2080081 29 96.6 32 ............................T ACTACCCTGGCGGGGAAACAGAATCCGAGGCT 2080020 29 100.0 31 ............................. GACAACTGGTCTGTAGGCCGGTACTTCATGA 2079960 29 96.6 32 ............................T ACTACCCTGGCGGGGAAACAGAATCCGAGGCT 2079899 29 100.0 32 ............................. TCGGCGGCGTTGGTAGCATCTTTTGCTAGGCT 2079838 29 96.6 32 ............................T ACGTAATAGCCAGGCAGTTGCGGTCGGAACTG 2079777 29 93.1 32 ...........................AA ACCCGCATCACCAGCAGACCCGGCCTTACGTG 2079716 29 96.6 32 ............................T AAGCGGCATGTGGGCAGCCACCTTCCGCTCCG 2079655 29 96.6 32 ............................A ATCGAGGAGGCCACCACCGGACACAGATATTT 2079594 29 100.0 32 ............................. GACGTGTGGCAAACTAGGGAAGCGTCCGCGCA 2079533 29 100.0 32 ............................. CACCGCATCCTTGCAGACACTGACGATACGCA 2079472 29 100.0 32 ............................. CACCGCATCCTTGCAGACACTGACGATACGCA 2079411 29 100.0 32 ............................. CGGTATGCGAAAAAATTTTCCAGGACATGCCC 2079350 29 96.6 32 ............T................ CGGTATGCGAAAAAATTTTCCAGGACATGCCC 2079289 29 96.6 32 ............T................ ACGTCCACAAGCCCGGCAACAACCTCGTCAAA 2079228 29 96.6 0 ............................T | ========== ====== ====== ====== ============================= ================================= ================== 77 29 98.0 32 GTGTTCCCCGCACCTGCGGGGATGAGCCC # Left flank : GGGCTAGCGCAGGGGATTCTGTGTGATGTTGGTTCTGATTGTAACTGACGTTACTGCGGGACTTCGGGGTGATTTGACTAAATGGTTGGTTGAGATTTCACCGGGAGTTTTTGTAGGGAATCCTAGTGCACGTATTCGTGAATTAGTATGGAAGCGCACTGTGACTCTTTGCTTGGATGGGCGCGCTTTGCTGATTTATTCTGCGAGTAATGAGCAGGGAATGGAATTTCGCACCCACAGGCATAGTTGGGTACCCACAGATTTTGATGGTTTGACTTTGATGATGCGTCCTACTGATGGGACGCAGCGACAGCACGATAGAAGAACTGGATGGTCCATCATGCGCCACCAGAGGAAGAAACTCAAGGAGACGTGAGCATGTTTTGACAGTAATCAAACATGCAATCGCCACAATTGGGAGTTACCACTAGTATTCGTGATAGTATGAAAAGCAAGGTGTAAAACTGAGTGATGCTTGGTTAAGTACCAGGTCATTAAGG # Right flank : AAGAGACAACCTGTCAACAACTTGCGGTCAACCCCAGAATTCAGAAATCCTGCCAGCGCGGCATTCAAGATTGCGGGTGGAACTCCGGATGGCACCTCATGAAGCCGGGGGAACAAAGGCGAGCGGGGCGAAGTCTTTTGTAAAATGGGGAGCAGAGGAGGTGCCAGGTGGAGACAGACCCGTTCAAGGAATACCTCCGGGAAGTTGAACCGGACAGGCAGTATAAAGGCTATGCGTGGCATACCGCCATCGGCTTGCAAGCCGTTGATGGGCTGAAAACCTCGGATTACCTGGCACACACCGCGATTAGAAACATCGAAGGCGAAATAACCTTTACCGAGGCAAATGCGCTTTTAGACGCGTATTATGCGGCAAAACCTGTTGGGGATGCTCCCAGTCGGGTGGAAGAGGCCGACAAGGTTTCAGCGCGAATCGCCGCGTTGCTGTCCGAAAAAGCCTTTAGTTTCACCCCGGGCGAATACCTGGGGATTCACCGTCGA # Questionable array : NO Score: 5.79 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.63, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCACCTGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCACCTGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //