Array 1 8793565-8784954 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP017169.1 Myxococcus xanthus strain GH3.5.6c2 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 8793564 37 100.0 34 ..................................... TCAAGAGCCCGGAGGGTCACCGGCCAGATCTTGT 8793493 37 100.0 33 ..................................... CAGTTGTCCTTCGCCGGGCTTGCGATGTCGACG 8793423 37 100.0 34 ..................................... AGCTAGCGCACGGACGTGCTGATGCAGCGTAATT 8793352 37 100.0 32 ..................................... TCACCACCCTCCCCTTCAGCCTTAGGCGTCGG 8793283 37 100.0 37 ..................................... CAGCAGCCGGGGATCAACATCCGATGAACACCATTCA 8793209 37 100.0 33 ..................................... CGCCACCTCCGGCACATCCACTTCGGGCGTCTC 8793139 37 100.0 35 ..................................... ACGATGCTGTTGTCCGCGATCAGCCCGGTGAAGGT 8793067 37 100.0 35 ..................................... TGCCGCACGAAGGCGGGCTGTTCCATCGCCTCGTA 8792995 37 100.0 35 ..................................... ACGCCCTTGCGCACCACCTCGAAGCGGCCCGCGCG 8792923 37 100.0 34 ..................................... ATGACCCCGGAGGCATTGACGCCCCGCATGGCCC 8792852 37 100.0 33 ..................................... TCGACTCGTCCATGAGTAGCGCTGAAGACAAGA 8792782 37 100.0 35 ..................................... CAGTGGAAGGATGCTTACATGGAATTGCATCGCAT 8792710 37 100.0 36 ..................................... GGAGCCCACGTGGATGAGTTCTACACGTTCGCTGAG 8792637 37 100.0 33 ..................................... TCAGCGCAGGCCTTGGCCACCACAACCACGAAC 8792567 37 100.0 35 ..................................... GCTTGAAGTGGGTTGAGTGCCGCTACAGCACGGAA 8792495 37 100.0 36 ..................................... TTCCGGTTCACGCGCAACGTGTTCAAGCCCAAGCCT 8792422 37 100.0 33 ..................................... CCCGCAGTGCGGACCTTCGCGGGCCTGGCGCGT 8792352 37 100.0 31 ..................................... TCGCGGAGCTGCCCGCCCAGTTCACGTTCCG 8792284 37 100.0 32 ..................................... TCCAGCGTCTTCGTGGGCCGGTCCTTCCGGTG 8792215 37 100.0 34 ..................................... ATCACAGGCGGCCATGTAGTCCGTCCGGGCCTTC 8792144 37 100.0 32 ..................................... GAGCGTGGCGCACCCGAGCGTGCCCGCGAGAA 8792075 37 100.0 32 ..................................... TCCTTCATCGCGGCAGCGAGGTAGCGGCACAC 8792006 37 100.0 33 ..................................... TGCGCTGGCGTCACCACGTCCATCCCCTGCCCC 8791936 37 100.0 32 ..................................... CCTCTTTCGTCCTGTCTCCACCGATGAGCGAG 8791867 37 100.0 35 ..................................... TGGATGTGAATGGCATGTCCCTCTCGAAGGTCGCC 8791795 37 100.0 32 ..................................... CCCTGCTGACCGAGGACAGCCCCCCACGTGCG 8791726 37 100.0 34 ..................................... CCGGCCAGGGCTGCCGAGATGGCGCCGGTCATCG 8791655 37 100.0 37 ..................................... CCCGCCACCTACGGGGAGATGGAGACGCTGCTCGCCG 8791581 37 100.0 33 ..................................... GCAAAGCCGGGGTGATTGAATGAGCCCCGCGAA 8791511 37 100.0 34 ..................................... AGCAAAGGCTCTCCCATGGACATGAACATAATCT 8791440 37 100.0 35 ..................................... ATGGTTGCCTCTTGCCGAGTCCTCCCCGGCGGTTG 8791368 37 100.0 34 ..................................... AGTGCTGAGGGGCATTGCGTTCCAACGGGGCAAA 8791297 37 100.0 32 ..................................... CGGAAGTCGACGGCCACTTGGTACTGCGCGCG 8791228 37 100.0 35 ..................................... TCGTGGGTGTCAGGCCGAATGCTGTTGGCCCAATC 8791156 37 100.0 35 ..................................... ATGTCACTGGCCATCCGTGCTCAGCGGGCCACCGA 8791084 37 100.0 33 ..................................... CCGACGCACAGAGCGCCGCCAGGGGCCGGCTGC 8791014 37 100.0 34 ..................................... CCCTTCGTGGGTGAGCCCCTCAAGCGCACGCACC 8790943 37 100.0 33 ..................................... TTGCCCAGCGCGATTGGAAGCTGGGCATACGGT 8790873 37 100.0 33 ..................................... CGTAGGTGGCGGCGCGTGTGTCGCCTGGAAGTG 8790803 37 100.0 35 ..................................... TTCCCAGGCGCCAAGCACGTCACCAGAAACGCCAG 8790731 37 100.0 33 ..................................... GTGACGTTTCGGATGCACCCAGTGCTGGATGAG 8790661 37 100.0 36 ..................................... CACGGCGCCGAACACCGTGGCGACCTCCGACTCCTT 8790588 37 97.3 35 .C................................... ACACAGAACGCGGGCGCCCAGCGCGTGGTGGTGGG 8790516 37 100.0 35 ..................................... ATGTCGAAGACGATGAAGTTGCTGCGGATGTTTAC 8790444 37 100.0 34 ..................................... GCGTCGATGCCGCGGACACGCCAGCCGAGGACGA 8790373 37 100.0 35 ..................................... TTGTGGCCGGTGCACCCCTCCAGCGGCGGACGCTT 8790301 37 100.0 34 ..................................... CTATGGAGGTGTCCGTGAAGTCGAGAGCTGAGGT 8790230 37 97.3 33 ...........................C......... TGAAGCAGGCTCGCGACAAGGGTCGGGTGGTGC 8790160 37 100.0 32 ..................................... GGGACATCCGCACCGGGCCCCACCAGTCCCAG 8790091 37 100.0 36 ..................................... GCCAACTCGGTGGACGTCAACCAGGCATCCTTCGTG 8790018 37 97.3 35 .....................A............... CAGCGCGCGCAGACTGACGTGGCGCTCCCGAAGCG 8789946 37 100.0 35 ..................................... GCGCAGGGCCTACTTCTTCCTCCCCGACGCGTCCA 8789874 37 100.0 33 ..................................... GCTACGTGGCGCGCGGCCTCAGTCGCGATGACG 8789804 37 100.0 36 ..................................... CTGACGCCGATGCCGGGCGAGGACGAGCGCGAGTAG 8789731 37 100.0 33 ..................................... CGCATTGGCCTCCCGCTGCACCCGTAGCAACGG 8789661 37 100.0 34 ..................................... GCCTGGATGATGGGGTGGGTGCTGGCCGCCACTC 8789590 37 100.0 34 ..................................... CGCCGCCCGGGGTTGAAGATCGCCGCGCGGCGCA 8789519 37 100.0 33 ..................................... CGTAGCTCTTTCGGGCAGACCGACAAGTGCTCG 8789449 37 97.3 33 ....T................................ GGGCTGGGTGCTCGAACCATGGGTCGAGTCGAA 8789379 37 100.0 36 ..................................... TCCGGGGACGACCCTGGAGTACCAGCCATGAGCGCG 8789306 37 100.0 34 ..................................... GTTGCCCGGCTCGTGGACGAACCGCACCTTCACC 8789235 37 100.0 33 ..................................... CCGCCCGTGCACGGGTACGCGTCACCGCCCCAC 8789165 37 100.0 33 ..................................... CAGCACCATCACCATTCCCCAGGTGAAATGGAA 8789095 37 100.0 32 ..................................... TTTGGGCACGGCGGCTTGTCTTCGAGCTTGAT 8789026 37 100.0 32 ..................................... CGCTTCTCTGCTTTCAGCGTCTTGTCGAGCAC 8788957 37 100.0 33 ..................................... GGTGATCTGCCCGAACAAAAATGCCTGGGCGTC 8788887 37 100.0 33 ..................................... GCAGCCGAAGCACAGGCCGCGAAAGAGGCAGCA 8788817 37 100.0 33 ..................................... GTGGCAGGCAATCACGCCTGTCGGGCACCAGGA 8788747 37 100.0 33 ..................................... GAGGTCGCACCCTGCGATGGGTTGGCCTCGCTT 8788677 37 100.0 32 ..................................... CCCGCCGCCATCCGCAAGTCCCCGCGAGACTG 8788608 37 100.0 32 ..................................... TCAGGACAAGAGCCTGAGAACCAGGCCGGCGA 8788539 37 100.0 33 ..................................... TCCCAGTGGGACGTGGTGATGCGGTGGGCGGTG 8788469 37 100.0 31 ..................................... GAGATAGGCGCGCCACTTCGACAGCTCGGGG 8788401 37 100.0 32 ..................................... CGTGACCTCGGCGTGGGGCAGCTCCAGGTGTC 8788332 37 100.0 34 ..................................... GTTCGGTGACGTCTGAGCTCATCGTCAAGGCGCT 8788261 37 100.0 34 ..................................... TCCGCGCTCAGCTCGGCGCCGCAGTCACCGCACA 8788190 37 100.0 34 ..................................... CCGTGCGCCCCGGTGTGACGCAGTTGGCGCCGTA 8788119 37 100.0 35 ..................................... GTTGCGGCCTCGTCCGTCTCGCGCATCCAGGTTTT 8788047 37 100.0 35 ..................................... TCACCGCCATCACCAGCGCCCTCAAGGCCCTCGCG 8787975 37 100.0 36 ..................................... TTTCGCGGCGTCCGTGCGCAACGCGGCCATGGCCCG 8787902 37 100.0 32 ..................................... GATGCGACGTGCGGTGACGAGAAGACAGCCCG 8787833 37 100.0 33 ..................................... ATGGCCGACCAAGCAGGCTCGACAGAGCTTGAA 8787763 37 100.0 33 ..................................... CTCTACGAGGTTGACCCCAGTCTGCGATGACCT 8787693 37 100.0 33 ..................................... CTGCGCAACCAGTTGACGCTGCTCGGTGATGGC 8787623 37 100.0 35 ..................................... ACCTTCACCTGCGCTATGGCCGTTACGTCGTCTCG 8787551 37 100.0 34 ..................................... CGGCTGCCCTTCGGACGGCCAGCGCCGGGGCGCG 8787480 37 100.0 32 ..................................... CGCGCAGGCGGCCCGCTAGTCGGACTGTGGAA 8787411 37 100.0 33 ..................................... CCCTTCACCTCGATGCGAACAATGCCCGGGGCA 8787341 37 100.0 33 ..................................... CCTCGAACATGAACGGCGCGAGGCTGCTGGGCT 8787271 37 100.0 33 ..................................... TGGTTGTCGAATGGGCCGCGGGGCACTTGCCGA 8787201 37 100.0 34 ..................................... GTCTTCACCCGTCCGGCAACCCCCAAGCCTGGGG 8787130 37 100.0 36 ..................................... ATGCAAGGGGTGGCGCCGCTCGCGCAGCAGGTGCCC 8787057 37 100.0 35 ..................................... GAGGCTGCAAGGGGTGTGTCTACCACTCCAGGGTG 8786985 37 100.0 34 ..................................... GAGGGCGCCCCCCAGGACCCGCCCAAGCGTCCCA 8786914 37 100.0 34 ..................................... AGGCCACAACGAACACGTCAGACAGCATCTGGAG 8786843 37 100.0 36 ..................................... GACTCCGGCGCTGGCGACTCACCCGCAGCAGAGGAG 8786770 37 100.0 35 ..................................... GGCGCCAGCTCCGCCGGCGTGTCCGTGGGCGAGCT 8786698 37 97.3 37 .......................T............. AGATACGTCATCGCGCGCTCGCGGTCGGCGGACGTGG 8786624 37 100.0 33 ..................................... CGCATTGCGCTGGCCGGCGCACGGGAAGCCATC 8786554 37 100.0 36 ..................................... GCGATGTACCTGGGGCCGCGCCTCCGCCGGCGTTTC 8786481 37 100.0 35 ..................................... GTCAGCATGTCGGTGGCGAGGGCCATGGGGTGCTC 8786409 37 100.0 33 ..................................... CAGCCGCCCTCTGCCGCCGCAGGTCGCCAGCCA 8786339 37 100.0 32 ..................................... ATGGGGTGCTCCTGGGACTGCGGGGAAGCTCG 8786270 37 100.0 34 ..................................... TCCGCCAGCAGGCAGGACTGGACGTCAGCCCAGC 8786199 37 100.0 35 ..................................... CTGGCTGCGGCAGAGGCTGACGCCCCGGTCGAGAA 8786127 37 100.0 33 ..................................... ACGCGCCGCTCAACCGGCGTGCCCTCGAAAAGC 8786057 37 100.0 35 ..................................... GACTGGCGCGGCATCGAGAAGAAGACGCAGGGCAA 8785985 37 94.6 35 .................G.A................. ACCAGCCGCAACGTTGCGCGGCGCGCCGCCTGGAG 8785913 37 97.3 35 ...................A................. TCGGCCTGCTCCTCCACCCAGTCCAGGTACGCGGT 8785841 37 91.9 35 ...................A..C......A....... CCCCTCGCAGAGCAAGTCCAACACGCGGGCGTAGT 8785769 37 97.3 35 ...................A................. GACGGGTACGCCGTCAATCCTCACCACGCGGGCGA 8785697 37 91.9 36 T..................A......G.......... CGGGGGTCGTGATTGCGCGGCATGCTCAGTGCTGCA 8785624 37 94.6 33 ...................A......G.......... TACCAGGGGCGGAACGACACCCAGGCGCGGCGA 8785554 37 97.3 33 ...................A................. TCGACAGGCTCAACGCCAGCGGGGCCAGGCACC 8785484 37 94.6 36 ................A..A................. GCCAGCGCCGGGGCGAAATCCTGCTCCACCGCGTAA 8785411 37 97.3 35 ...................A................. TGCTGCGTATCCGGTCATCCGTGGCCGCAGGCCAC 8785339 37 97.3 32 ...................A................. AAGCGGCCCACGGAGAAGCGCTACAAGATGGG 8785270 37 91.9 34 C................T.A................. TGCGCAGCAAGGTGTCGTGCAGTGCCTCGAACTC 8785199 37 94.6 33 ..............G....A................. CGGACCACGGTGAAGGTTGCCGCCTGGTGGAAC 8785129 37 97.3 32 ...................A................. AGTCGCAGAGGCCGCCGCAGCCGCAGCAGATA 8785060 37 97.3 33 ...................A................. TTCAAGGCGGACGCCGGCCTACCCCTGCTCGTC 8784990 37 97.3 0 ...................A................. | ========== ====== ====== ====== ===================================== ===================================== ================== 122 37 99.3 34 GTCGCTCCTCGTGAACGCGGGGAGCGTGGGTTGAAAC # Left flank : CTCCCTTCGCGATGCGCTGATGCGTAGATTGACCGTGTTGATTTGTTACGACGTGCGGGTGTCGGACCCCCAGGGGCCTCGGCGCCTGCGCAAGATCGCGCGGGCTTGCAGAGACCATGGCGTGCGAGTGCAATACTCCGTCTTCGAGTGTGTCCTGGAGCCCAAGGACTGGGTCGTCCTGCGCGCCCGCCTGCTCGGCGCATTCGATTCGGAATGCGACAGCCTGCGCTTCTACTTCCTGTCGGAAGACGATGCCCGAAAGACGGAGCATCATGGCGCCAGGGCCCCCTTGGACGTCGAGGGGCCGCTGGTCCTGTAGGCCTCCGCGAACCGGCCCCGGTGTGCGCTCCGTCGAGGGTTCGCGCTCTTTGAAATCCCGAATAGAATCAGCGAGTTGGGTGAGTGGGGGCAGGAACGGCGGGGCGCTTTCGTGGCCGCGCGGGCCGGTTCGCGAAATTCGGCCGGATTCCGTAGTCAGAACGCTATGTTGGAGAGGCAGA # Right flank : GTCGACCCGGAGGTGGTGTACCTGCAGCGAAGGACTTTCGCCGCTGGAACATCCGGCACGGCGGCAGCAGCGGTTCTCCGCGGACTCGCTCGTGCTCAGGCTCCAGAAGTCGCCGGGCATGCCCAATCCACGGCACTTCTCGCTCAAGGTCTTCGGGGACGGCCGTTTCAAGCGCAACGGCTCGCTCCTATCCGACGTGAACGCGGCCGATGCCCATCGGCTCACGACGTTGCTCATCGCCGCGAGCCGGCTGGACGAATACAAGGAAGGCCGCAGCGTCCCCCGTCCCTTCGCACATGACCGGCAGGTGACGACGTCCGAATCCACCGTGGACGGCCGGCGCACGCGTCTGACGTTGGTCAGCGACATGCCGCCCGACATCCTCCGCTTCATGCAGCAGGTGGCTGCCGCTTACGGCATCGAACTTTGAGCGCGAGGACCCCGGGTGCCCCAGGGCTGGAGGAACACCTCCGTCTCCTCCAGGATTCGCGGCAGTGACG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCTCGTGAACGCGGGGAGCGTGGGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCCTCGTGACCGCGAGGAGCGTGGGTTGAAAC with 95% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-9.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [21-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [35.0-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //