Array 1 161499-157721 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADNCP010000008.1 Eggerthella lenta strain 1001287H_170206_A6 NODE_8_length_222184_cov_53.9738, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 161498 33 100.0 34 ................................. ATATCACGTTCGACCCGTTTTGTCGCGGGGCGCG 161431 33 100.0 34 ................................. CTGAACGACTACGGGCTGCAAGACCTCGTGGGGC 161364 33 100.0 33 ................................. CCCTTTATTACAGGTACATAAACACCGACCGCG 161298 33 100.0 33 ................................. TACTCCGAAACGGAGTACATCCATGACACGGAG 161232 33 100.0 33 ................................. CGACACCTGCGCCTGAGTGTTTCCGATGGTAAG 161166 33 100.0 33 ................................. ACGATCAGCCCGCCGTCTATCCGATGGCGCAGC 161100 33 100.0 33 ................................. CAGATGTCGCCGTTCATGGGCGCTTCAAGATCG 161034 33 100.0 33 ................................. CTCATAGTATGCGGGGCGCTGATGCGCGCCCCG 160968 33 100.0 33 ................................. CTCATTGGTGATCTCAATTCCAACCGGCACGAA 160902 33 100.0 34 ................................. TCCAGTATACAGAGCGTTGCGCAAGTTGTCCTGG 160835 33 100.0 33 ................................. CCGTGCTGCGCCCGCCCAATTCCATGAAAAGGC 160769 33 100.0 33 ................................. AGGCCCTTAAAGCCCGCAATTACGACCTGTTGA 160703 33 100.0 34 ................................. ACCTTGTAAAAGCCGTCGATGCGCGCGTACTCGG 160636 33 100.0 35 ................................. TCATATTCATAGATGTTCTCTGGCAGTCCAGGGAG 160568 33 100.0 33 ................................. CACATAGTCACGCCATAATCATCGCGCGAGAGC 160502 33 100.0 33 ................................. TACTTAGTGTGTTATATGCGCCGCAAATACTAT 160436 33 100.0 34 ................................. GGATACGCTCTCATGCATGCATACCCTGTGGCCG 160369 33 100.0 35 ................................. TTGTTGTCGCCGTTCCTCGCGGCAGCCACCTCGGC 160301 33 100.0 33 ................................. CGATGCCGACCACGACGATAGCGCCCATGATGG 160235 33 100.0 32 ................................. GGGCTGACGACCCAAAGAAAAGTCAGCGCCGC 160170 33 100.0 34 ................................. TACTATGTTTACAGTACCGAGGAGCTGAGGCCGT 160103 33 100.0 37 ................................. TTGCCGACGTGCTGGACGGCTACAACCGCACCCACGA 160033 33 100.0 33 ................................. AGCCTCTTTTCGCTCGTCGCGTTCGTCGAGCTG 159967 33 100.0 33 ................................. TAAACGAACTTGAACAGACGCATTTTGATAACC 159901 33 100.0 32 ................................. GAGTTCGTTACCGACACGATCGGCCTCATCGG 159836 33 100.0 34 ................................. GAGCTCGCCTGTGTACCCGTCGTTGGTGACGATG 159769 33 100.0 34 ................................. ACGTTGCCCGGATCGAGCTTGAGCGCGCGCTCGA 159702 33 100.0 35 ................................. TCGACGACGGCCCTCACGTCGTCGATGGTGCGGCC 159634 33 100.0 34 ................................. TATCACATGGAGCGGACGAGGTTCTCCGCGCGAG 159567 33 100.0 34 ................................. ATCTTGGGCGTGCCGGGAGCGGGCAAGAGCTTCA 159500 33 100.0 34 ................................. ATGGCGAGTACTTGGACGTAGTTGACGGTCGCCG 159433 33 100.0 36 ................................. ACGTATACGGGCTTCGCGCCGGTGCCGTTGACGTCC 159364 33 100.0 33 ................................. GACAACGCGATGGCCAAGGTATCGACCATCGCG 159298 33 100.0 33 ................................. GATCCGCTACGACAACGTAGGGGATCAGGCCGA 159232 33 100.0 36 ................................. AATGAATCGATCAAGCGCGCCAACGGCGAACTCACC 159163 33 100.0 34 ................................. GAAACCGTGCGCGACGGCGGAAGCAAGCTGGACG 159096 33 100.0 33 ................................. GGAGAAACATATAAAAAGGACGGTGTAATCTCG 159030 33 100.0 35 ................................. CAGTTGATGTCTTTTCGCAGGTCGATGGCGCACGC 158962 33 100.0 34 ................................. AAGCCGACGAATACGCCGGCGAACGCCATTCAGC 158895 33 100.0 34 ................................. AGGCCCTGTCGGCCCGGTCGGCCCTGTCGGCCCC 158828 33 100.0 34 ................................. ATGTCGGCCTTGGTGAACTCGGACAGGTCGAAGC 158761 33 100.0 33 ................................. ATGCTACTAGACGATTTTTTTGTTCCGAAATTG 158695 33 100.0 32 ................................. GGGCTGACGACCCAAAGAAAAGTCAGCGCCGC 158630 33 100.0 34 ................................. TACTATGTTTACAGTACCGAGGAGCTGAGGCCGT 158563 33 100.0 33 ................................. AGCCTCTTTTCGCTCGTCGCGTTCGTCGAGCTG 158497 33 100.0 33 ................................. TAAACGAACTTGAACAGACGCATTTTGATAACC 158431 33 100.0 33 ................................. TGGCAGCCTCTCGCAGGGTCTCGGCTGGCTCAA 158365 33 100.0 37 ................................. GAAAAGCTGCACCGGCGTGCCGACCGTGATGCCGTTA 158295 33 100.0 36 ................................. GGCACTGACGTGAACGAAAGCGTCAAGGCTGCAAAC 158226 33 100.0 33 ................................. CCCACCGCGATCACCCAGAACGTCGAGTACCTG 158160 33 97.0 33 .............C................... ATGTCGGGGAAAAGGCGCGAACCCATGTAGGCG 158094 33 100.0 38 ................................. CAGGTAGGCGTTGACGGCCTTGTCGTTGGCCTCGGCCA 158023 33 97.0 33 ..T.............................. CTACGATGCCATGGCGTCCTATGCATTCACGGG 157957 33 97.0 34 ......T.......................... GAGGAATATACGCGATTCGTTGAAACGGATGTAG 157890 33 90.9 36 A.....T...................G...... GGCACCGCGGTGTACTCCGTGCTCGAGAACGCGCGG 157821 32 93.9 34 .................-..............C TGTTCGGGTTGGCTGGCAAGCTGAACGCTGACAC 157755 33 75.8 0 .....GTT.A..T.....C.C..........G. | C,T [157739,157751] ========== ====== ====== ====== ================================= ====================================== ================== 57 33 99.2 34 GTCACTCCCCGCATGGGGAGTGCGGGTTGAAAT # Left flank : GCGCGGCGATCTAGACGGCTACCCGCCGTTTCTATGGAAGTGAGATGGTTGGCATGCTGACAGTGATTACCTACGACGTGAATACCGAGGATCCGGCAGGCCGACGTCGCTTGCGAAAAGTGGCGCGACATTGCGTCAATTACGGTCAGCGTGTCCAGAACTCAGTGTTCGAATGCGTTGCCGATGCTGCGACGATGGTTCGTATCAAGAGCGAGCTCGTCGAGCTGATCGATCCGGAGAAAGATAGTTTGCGATTCTACAGTCTTGGAAGCAAATATGAGACGAAGATTGAGCATGTAGGTGCGAAGCCAACGTACGAAGCTGAAGGGTTCTTGGCATTGTAGGACCATGGTGCGAGCACGAAGCTCGCATATGACATACGTGAGGTTCGCACCAAATAGTGTGACATAAAGATGCCTGACGCGCTTGTTGCGTGTACCTTGTTTGTCTATTGGCGCTATATGTTGATCGAGGCAGTAAATTTTGCGCATAATATTGCG # Right flank : CGCGCGCAGCTGTCGTGGTACGGCCGAGGCGTGGTCGGTCGTACCACTCGCGGGCGCGCGGGTAGAAGCAGGGTATCCGGGTTGAAATCGAGCAGCGTTTCGGCAGGTTCTGTCGCTCCCTAACGAAGGGGCGACCGATCCTTGCCGTCGCTTCCTATCGAGAACGCGGATTGATTCGCTGATTCCGAGTTTTGCTCGTCGGACGTCTGCGCCGAGTTGCGAAAGGCGCAGACGTCCTTCGGATCGCTACTCCACCACCAAATCAACGAACTCAAACGTCGTGCAGTCAACCAGGCCGCGGTTCGTCAGGCGCAGTTCGGGCAGGCATGCTAGCGGGATCAGGGCCATCGTCATGAACGGCGACGGCATGGTGCAGCCGATCTCGGCCCATGCGCCCTCCAAAGCATGTACCTTCTCGCTCATCGTTACGGCGTCGAGCGAGTCCATCAAACCGGCGATAGGAAGCTCCACCAACCCCAGGATCTCCCCGTCGGCGACCA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTCCCCGCATGGGGAGTGCGGGTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCACTCCCCGCATGGGGAGTGCGGGTTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.20,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //