Array 1 6747-4346 **** Predicted by CRISPRDetect 2.4 *** >NZ_BIMW01000011.1 Arthrospira platensis NIES-46 sequence011, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================================ ================== 6746 37 100.0 47 ..................................... AATCCTGTCAAATAAATAAATAAATAAATAAATAAATAAATAAATAA 6662 37 100.0 39 ..................................... TGCACGTTTTTTTTCCCGCGTGCCGTGTTCGGCTTCAGG 6586 37 100.0 40 ..................................... TTCCCCTTAGTGCTGACTCGATAGCCATTTCTATATTTTG 6509 37 100.0 36 ..................................... GTCTGGAACAACCGATAATCGTGTGTGGTGCAAAAA 6436 37 100.0 41 ..................................... GTGTGACTTTTTTGCCTGTTGCTAAAATGAAATTTTCTGTT 6358 37 100.0 43 ..................................... CACGAATCACCATTTCAATTTCGGGTATTTCCTTGATCGCGTT 6278 37 100.0 44 ..................................... TCATCACTACCCAGAAGTCTTTGTACTTCATCCATGTCACCAGC 6197 37 100.0 43 ..................................... AAGTATATACATTCTGCCTGGTTGAACTGCTCCATTATCTGGA 6117 37 100.0 39 ..................................... AATTCATCTCCGTCTCCGTCGGAGTCTCCTTCGTGGATC 6041 37 100.0 45 ..................................... TCGGATAGGAATGCAACTGATGCTTTTCCTCTTTCGATTGCCCCC 5959 37 100.0 44 ..................................... TTTTATTTTATTTTTAGCTCCTTAGTTCCCTAGCAGTTTTTCTT 5878 37 100.0 42 ..................................... AATAAATATAACATAGAGAATAGTAAAAATTATGAAGAAGAA 5799 37 100.0 45 ..................................... CCGGAAGTCATCGAAGACTTACGCAAGGGGGCGGCTGGCCCCCTA 5717 37 100.0 39 ..................................... ACGAGAATTGCTTCTCCTGCCACTTGTAGAAGGGGGCCT 5641 37 100.0 44 ..................................... CCTCCTTTGAAAATCCGACTACCCTTCCTCTTAAAATTGGAAGG 5560 37 100.0 48 ..................................... ATTAAATCTTTTACTGTTACTGTCCTTTATGCGGCACACAAACTTAGG 5475 37 100.0 44 ..................................... TCGACATCGGTATCTAAATGCCCATCAAACACTCTGCCTATCAA 5394 37 100.0 41 ..................................... TTCCCGAAAATGATGCTGAAACGCTTCTGGCGTTTGCCAGG 5316 37 100.0 46 ..................................... GCGCGTAACGTCTTAGCACCGAAGAGCCCATCGATTTTACCCGGCG 5233 37 100.0 41 ..................................... TCTATCTTCCGTTTGTCTTCTACATACTCCCACCCCACCCA 5155 37 100.0 35 ..................................... TAAAAAGCGTGTTGTGGCTGCATCACAGGGAACCA 5083 37 100.0 40 ..................................... TCCAAAATAGAGAGGCCGCTCTCTCTTGGTTGGAAAATAT 5006 37 100.0 42 ..................................... GTTTCGCTTTTTTTGGGGCTTGCGTTTTTGCTTTGGTTTGGT 4927 37 100.0 40 ..................................... CACATACCCCGAGGGGCGTAGATTTGCCACGACAGACCTA 4850 37 100.0 44 ..................................... TACTGTTAATTCTAATTTTTCTTTTAAAAAGCTTACTATACTGT 4769 37 100.0 36 ..................................... TTTTATATAGATTAAAGGAGGTTTATGCCATTTTCA 4696 37 100.0 41 ..................................... TTTGAAGCCCATTTTATTTTCCTCAAATTACAACAATAAAA 4618 37 100.0 42 ..................................... ATTTTCTAAATCCTGAACCCAGTATGTTCCGCCTCCTACGGG 4539 37 100.0 45 ..................................... ATAATATTATTTGATGACCAGGGTACGTCTCAGGTCGTTAGGGGA 4457 37 89.2 38 .................AAG.A............... GGCTAGGGAATGCCGATCGCATTTTGTGATTTTCCAAA 4382 37 83.8 0 ...AT................AA.......G.....G | ========== ====== ====== ====== ===================================== ================================================ ================== 31 37 99.1 42 GTCCAACCCTACCAATTCCCCGCAAGGGGACGGAAAC # Left flank : CCTGGAGGAAAAAATTCTGGAGGACTTATTGAATAAGCGGTGGCTGAAGGTTTTGAATTTAGAAAAGGATAGTCTGCGGGCTTATCCCCTCAATCCCTCGACTAAAGCTCAGGTTAAGGTCTACGGGGGACCGCTTCCTTACGAACCACCAGACTTTCTCATTTTGTAAGGGTGGCGATCGTCCCAATTTTGATGGCTTTGGGGCTGAAATGCCCTTGAGTCAATGATTTTCAGCAATGTAAAGTTATATTGCAGTTTTTAATAATATGGCGCGACGAGGATACAACAGAAACCTGATATAAACTTGAGCTAAAAAAAGAGAAATTTGTTTTTTGGGGGGTTGACAGTCTCGCACAACTCCTGATAATATAAAAACATCGCAAAACAAACGAATTTACTCGCGCCAAACAAGCCTGTAAAGTTTTGTTAAGCACCTTCTACGTGTTCTCGCGCAAACGCACCTTGAAAACCGCATACTGTAAGGTTTCCAAAGGTATAGG # Right flank : GCGAGAAAACCGAGTCTTAAAAAGCCCCCAGGGTGAAGTCTTGTTAATGAGGGGGTAGGGTAGGGAAACAGTGTCAGTAGAAGATATTTCCCATCAATTAACCTTCCACTTCTCCATGGGTTTGGTGGGGGGAATTTCCTAACTTCACCTGCTTACCAATGAGATTTAAAAAAGTCGAGCCAAAATGCTGAATTTCCAAAAAGTTCGCATAAGCCGGGGCAGGTTTATAAATCCTAAAACTCTTCATAATTCCCAGAGTTGCCGCGCTTTCCAGGGGACCCACAAAACTGCTATCTCGGTCTAAAAAATAAGGTTGTTTGACCCAATGTTCCATCTGGTTATTGTTGAGAAAATAACAGCCAGCGTGGGGGTTTAAACTGCGATTAAATTGAATGGGTTGCTCCATCACCTTACCCACCAATTGGGGGCGATCGCGTATATTTTGAAACTTCGCCGTCACATGGGGTAATAAATCCCCATCAACATAGGCTTTATTAATA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCAACCCTACCAATTCCCCGCAAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.40,-9.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.15 Confidence: HIGH] # Array family : NA // Array 1 65540-61394 **** Predicted by CRISPRDetect 2.4 *** >NZ_BIMW01000001.1 Arthrospira platensis NIES-46 sequence001, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================================================================================================ ================== 65539 37 100.0 44 ..................................... GCTTCGGGAAATTGTCGGGACTCCTTCTGGCCAGAGCGGAGTAG 65458 37 100.0 42 ..................................... AAGATGATGCCTCTGTCCCCACTGAAGGGGAAGATAGGGGCC 65379 37 100.0 44 ..................................... GAACGAGGACTTCGCCATCCTCGTTCTCGCTGGTTGTTTCCGTG 65298 37 100.0 37 ..................................... TTCCGTCTGGGGTAATCGCGACTGCTAATACCCCGCC 65224 37 100.0 41 ..................................... TCGATTTCAACTACCAAGCTACGAGGTGTTGCTAGTAAGTT 65146 37 100.0 43 ..................................... CCGCGCTTCTCAGCGAGTTCCCTCATCTTTTCCTCTTTCGAGG 65066 37 100.0 34 ..................................... CACAGCACGGGCTCAGTGCCGTTGTATAGGGCAA 64995 37 100.0 40 ..................................... TTTCGTGTTTAAGCGCCTTTATCACAGGGTGTTCTAAAGG 64918 37 100.0 45 ..................................... TGAACTCTTTAAAGTCCCCCCATATACTGGAGAGTGTCCCCTCCG 64836 37 100.0 45 ..................................... TTCATGGCACACATAGACAGCTTCGTCTTTAGGGACTACAAAAGG 64754 37 100.0 43 ..................................... AGGGATGGCATCCAAGCATACCCCTTTTGTATGTGCTGTGCCA 64674 37 100.0 41 ..................................... TTTTCCTCGGATTATTCCGTTCTTCCCAACTGGAGACAAAA 64596 37 100.0 45 ..................................... AATCAGTGCTAATCTCGTCCGGGGGCTGAACCGACAAAATACCTT 64514 37 100.0 44 ..................................... CTTTGAAGATATTTTTATAAAAAATCAAAAAAGGTTTATTAAGT 64433 37 100.0 46 ..................................... ACGGTCCCTGTCCCTGTGTTTGTTAATACCGCCCCACAGGGGTGCG 64350 37 100.0 43 ..................................... TTTACCAATAGTATTCCTGTTCCTGTTCATGAAGGACCGAGCG 64270 37 100.0 39 ..................................... GTTTTTTCCCTAGCAATCAAACCCTTTAGCTTTGTTTGT 64194 37 100.0 41 ..................................... CCTGGTTGTGTCACCAACCAAAAATTACTTTTGTCCTTATT 64116 37 100.0 39 ..................................... AAAAGCCGTGCTACAAAAGGCTCCCAGGACATACAGCAT 64040 37 100.0 124 ..................................... AAGAGGCACTGAGCCTGGATGAGTGGAACGATGTTATCATGGTGTCAGACGTTTGTCCTAAGCCACTTGACTTTTTATACTCAATGCCTTATGGCCTGGATGAGTGGAACGATGTTATCATGGT 63879 37 100.0 45 ..................................... TCGAACGCACCAAATTCGAGGTAGCTTTCCGCTCCGTCCCCTCCG 63797 37 100.0 42 ..................................... AAGGATATTTTTTAGAAAAAATTGAACTAATTTATAAAGAAA 63718 37 100.0 45 ..................................... CAAACCCAGCACAGTACGGGTTCTTGTGGGTCTTTTGCGTGAATA 63636 37 100.0 40 ..................................... CTTACAAATCGGCAAATTCTTGTTTTTTGATTTTTTAGGT 63559 37 100.0 43 ..................................... AAAGGAGCGGATATAGGCTCTCCGATATTTTCTTCCCCGTTTT 63479 37 100.0 47 ..................................... TTAAATCATCCTTTGATATGATGTCCGATTCATCAAATATATATAGG 63395 37 100.0 39 ..................................... TTGCTTACCCCGCGTTAGGACTACTGCTTGTATTAAGCT 63319 37 100.0 42 ..................................... TGTCTTATAGAAACCAGGTTTCCATAATTCTGATGCTGGTAT 63240 37 100.0 45 ..................................... TTGGATTGCCTTGCTAGTGTTTCTCCAGGCATTTCTGCTGTCAGC 63158 37 100.0 38 ..................................... TGGAGGGGTTTTTTCGTTTCCCCGGAGGATTTTACCCA 63083 37 100.0 42 ..................................... CCTGCTCCTTGGAGGATGATTTGGTCAGCTTGGAGGATTTCC 63004 37 100.0 46 ..................................... TATCTGGAACAATAGCAGTTCTGAGATTATTAAAATAATCTTTATT 62921 37 100.0 44 ..................................... TATGCATAAGAAACATACTCTTCCACTTTTATCGCCTCTTCACT 62840 37 100.0 41 ..................................... TTGATTAACGGCATCGCGTTAACCTGTTTAACTTGAGAAGC 62762 37 100.0 41 ..................................... AAACCTTGGTCCACCAACTTCGGTCGGCATCCTCTTTGTCT 62684 37 100.0 39 ..................................... TTACCAATAGTATTCCTCCTGTTCCTGTTCCTGTTCCTG 62608 37 100.0 49 ..................................... CCCTAACCACAGGTTTAGCTCGGGGTCTAGTTCGATGCAGGCGCAGCAA 62522 37 100.0 43 ..................................... GATACGCAACCATCAGCGCTGCTTCTAATTGCTTATCATCCAA 62442 37 100.0 39 ..................................... TGTTGCTCTTCCGGGGTAGGTCCCCGCGAGTTGAACTCA 62366 37 100.0 45 ..................................... TTTTGGTTTTATTATCATTGTTGCTCCTTTTGCCATAAAGCTAAT 62284 37 100.0 45 ..................................... ACGCTGTCAGCTCTTCCGGCGAGTTATCCCAAATCAACTCGTCCT 62202 37 100.0 43 ..................................... ATTAGGTTGACGCAATGCGATTGAGTGTACCTTACAGAAGCCA 62122 37 100.0 38 ..................................... CCACTTTCTGTACTACTTTAAGTACTTCTCTCAGGATA 62047 37 100.0 43 ..................................... AACCCTTTTTCGGCGTTTTTGAATTGAGTAAAAAAATCAGGCT 61967 37 100.0 35 ..................................... ATTAAATACTCCCCCATATCGGGGTCATAGATAAT 61895 37 100.0 38 ..................................... GAAAACTCGCCAATTCTCATTGTTCGGGGGATTGAGCG 61820 37 100.0 47 ..................................... CTGTCACAATGCTCCAGTGGAGGGCGGGCCTATCGATAGCATAAATA 61736 37 91.9 38 .................AAG................. CAGGGAGCTATCTCTTCTTTCTCAATTTCAAGAATGAG 61661 37 81.1 42 ...TA.........G..T..T.TC............. AACCCGGAACCACAAATAATATCTGTTCCGGGTTCTCCTACC 61582 37 83.8 38 T..TA............AAG................. CAGGGAGCCATCTCTTCTTTCTCAATTTCAAGAATGAG 61507 37 86.5 40 ...TA............AAG................. AGCTTTTGAAACTTAGCCTTAATAAAAAGAGAATCAGATA 61430 37 89.2 0 .................AAG..........T...... | ========== ====== ====== ====== ===================================== ============================================================================================================================ ================== 52 37 98.7 44 GTCAGACCCTACCAATTCCCCGCAAGGGGACGGAAAC # Left flank : TCGCGGATGTGGTGGCCAATCTTGGCGACAGGTTCCCCCATAGCCAACTACACCTCACGCCTCCCCTAGACCACAGCACACACCTGGGGGATTTGATTTGTACTTGGGCGAAATCTTACCTCTAAGATATCTTCCCCCTGCTCGGGTGGGGGGTGATTCTCATAATTATTGGGGTTTTTTGAGGCGATCGACCCTCCCCAATATCTCTGTTGGTTTCGGGGTAAGTGTTTGGGCTTGTGTAAAGTAATGTTACAGATTCTCATAACCTCGCGCGAGTTTTAATTTGGCGATCGTTCAAGTAAACTGGAGCCAACAACAGAAAAGTTTTTGTTTTTGGGGGTTGACACTCTGGCGCTCTCTCTGATAGTATTAATTTCAGTGAAAACAAAGGAATTTGCTTCGACAAAAACAGCCTGTAAAGTTTTGTTAAGCACCTTCTAGGTATGCTCGCGCAAACGCACCTTGAAAACCCCATACTGCAACGTTTCCAAAGGCATAGG # Right flank : TTAACTCCACAAGGACACCTCGTCGCTTGTGGTGAAAGCGACCGTCAGACCCCAGCAACTCCCCCCAGCAGAGCGATCGCATTTTCACAGCCAGCAACTCCTCTAGGGGCGATCGCATTTTCACAGCCAGCAACTCCCCCCACCAGAGCGATCGCATTTTCACAGCCAGCAACTCCTCTAGGGGCGATCGCATTTTCACAGCCAGCAATTCCCCCAACCAGAGCGATCGCATTTTCACAGCCAGCAACTCCCCCCAGCAGAGCGAAACCCCAGAAATTAGTTAATTTTGAGAGCGATCGCCAGGGTATAATCATCTGCAAGGGATTTTTGCTAATTGACTCAATGAAACCAGGTCCATCGACACCAGAAACACATTTGCCAACCTTTCCCGTTTTAGGATTACCAGTCCATTTGGCTGATAATTATAGCCAGTGGCTGTCATGGCGGCTGAGTCAGGGTTTGGGAACTAATGTCATTACCCTCAATGCTGAAATGGCGAT # Questionable array : NO Score: 6.05 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:-0.14, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCAGACCCTACCAATTCCCCGCAAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.40,-9.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [25-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.15 Confidence: HIGH] # Array family : NA // Array 2 136751-139399 **** Predicted by CRISPRDetect 2.4 *** >NZ_BIMW01000001.1 Arthrospira platensis NIES-46 sequence001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================================ ================== 136751 37 100.0 39 ..................................... GTCCGGTGGGCTTCATAGTAGCTGTAATTTGGACGGAAG 136827 37 100.0 44 ..................................... TTCGCGCGATTAAAGCACGTAATCAAGACATTTGATTTGCCACA 136908 37 100.0 44 ..................................... TGTTGGGCTCGTGGCAGCGCAATGCTGCGCTCACACCGCCAGAT 136989 37 100.0 44 ..................................... CGCCCATCCCACGAGGCAATCCTTACCTTGATATCTTTTCTGAA 137070 37 100.0 41 ..................................... TTAGAATCAAATAAGGAAAATAAAGAAATATTAGTTTTAAT 137148 37 100.0 46 ..................................... CCAGGCTTTGAGGATAGGGTAGATATCCCGCAGACTCATCACCCCG 137231 37 100.0 44 ..................................... TTTGAAACCTTCCTTTTCTAGCAACTCGACAGAAGCGATAACTA 137312 37 100.0 40 ..................................... ACTCTTTTATTCTATGTAGTTCCGTGTAGTTGTAGTATAA 137389 37 100.0 47 ..................................... CTCCTGCGTTAACGCATTTTTCGACTACGGAATCGAAATCCTGCAAC 137473 37 100.0 48 ..................................... CTTAATCTTGTTTATTGCTTAGTTTCCGAGATAATAATCAGCGTCCTC 137558 37 100.0 38 ..................................... CTATGAACGGGACCTCCACCTCCACGGATAAGGAGTTT 137633 37 100.0 45 ..................................... GTAACTTGTTTTCCTTCTACGGTTGTCACTAGAGAAGCAGATCTG 137715 37 100.0 41 ..................................... GTTCGTCTTGCAGGATAGCATCTGCTCGTTGATTCAGTTCA 137793 37 100.0 43 ..................................... AGTCGTAGGTACTGGAACCGCATTCACCGCTGACTTTGCTATT 137873 37 100.0 48 ..................................... TTGTGAATTTTCTACTGTTTCTCCGTTGGCACTTATGTCCACATAAGT 137958 37 100.0 40 ..................................... CGGCCCGTAGGTATACTACCAGTTCGAAGGTAGTCCTGAA 138035 37 100.0 43 ..................................... ATGGGCATTGTCGTTTTACTACAATCCTCCCTTTTTACTTTTT 138115 37 100.0 41 ..................................... CAGACATGATTTGTATGGATAAATACTCCCCCTTCTGGGTG 138193 37 100.0 43 ..................................... TTAGCTGTCTTTGGTGTTCATTCATCTGGAAATCCTCAGCAGA 138273 37 100.0 41 ..................................... TAATTCAGGGTGTTACACCAAATAGGTGTATCCGCTTCCCA 138351 37 100.0 41 ..................................... TTATAATATTTTTAAAGAACAAGAACCAAAACAAGAACAAG 138429 37 100.0 39 ..................................... TTCGAACAATAGCAGTTCTGAGATTATCAAAATAATCTT 138505 37 100.0 44 ..................................... TTAAATGACCTCATAGAAGGTATTTGTAAATTATTTCCTTTTAT 138586 37 100.0 36 ..................................... TTCTGACCGGGGAGAAGCCCTCCCCTTACCGAGTTT 138659 37 100.0 42 ..................................... TATGCTTTTGATTCCGCTTCTTTTATCTCTTGTCTAGTGGCG 138738 37 100.0 41 ..................................... AGTCCATATTTTAAAGTACCCGGTTACCTTTTTATTATTTA 138816 37 100.0 45 ..................................... ATAATCCACCTTCCGATTTGACCGTTATTCTTTACAGCCAACGGA 138898 37 100.0 42 ..................................... GAACCTGGGGCATATTACCCTCTTGTCCTGCAGAGAAAAGCC 138977 37 100.0 39 ..................................... TTTAACCAGACTACATCACAGTCTGTTAGCGCTTCCTCG 139053 37 89.2 43 .................AAG...C............. GATCGCAATTCTCTAGTGCCCTTTTCCTGTGATACCCGCTGAG 139133 37 89.2 39 .................AAG...C............. TTATCGAATGTCGTCTTAGAGTGCTTTTTTGGATTTGAA 139209 37 89.2 41 .................AAG...C............. AGGGGGAAGACTCCCCACTGGTAAGCGCCATATTCTCCCAG 139287 37 89.2 39 .................AAG...C............. GAAATCCGAGCGATTCCACTGGGTTGGTTGTGTTACTGT 139363 37 86.5 0 .................AAG...C............G | ========== ====== ====== ====== ===================================== ================================================ ================== 34 37 98.3 42 GTCAGACCCTACCAATTCCCCGCAAGGGGACGGAAAC # Left flank : CAGGTGCATTGGACTCAGTTCACCGCTGACGGACAATCTGGGGATGCCAAAATGTTGACAATTGCTGAAATTTCTTGGGGTGGACTTTGGTTATCTTCCAGGGTTAGGTGGGCTTGAAGGTCTCTCCCCTGCCCCAGGGAATGAGTCGGTGGGTTGATTCTCATAATTATTGGGGCTTTTTAAGGCGATCGACCCTCCCTAATGGATGGATTCCTTTCTGGGTGAGTGTTTGGGACTTTGTAAAGTTATATGACAGATTCTCATAACCTCGCGCGACTGGCAATCCTGGGCTAGTTCAGGTAAATTTGAGCTAGAAAAAGAAAAGTTTTTGTTTTTGGGGGTTGACAGTCTGGCACTATGGCTGATAATATATATCCAGCGAAAACAAAGGAATTTGCTCCCCAAAAAAAGGGCTGTAAAGTTTTGTTAAGCACCTTCTACGTGCTCTCGCGCGATCGTACCTTGAAAACCGCATACTGTAAGGTTTCCAAAGGTATAGG # Right flank : GCTAACTGGTGTGTTGATTTTCTCAGGGTCGAAGTTGATAGAGGTCCGCCAGTGGTCAATGGGGTAGTTAATAGCCATCACCTTTTGCGACCCTAGAGTTAGGGATTCATCCCCAAATTGGGTGGGGTATGATGGTGCAAAATCCGATTAATAATCCCACTGGTAGAAGTAGGCATTTCCACGGCAATTAGGACAATCTTGCCGCCATAGCTTTGAACCGTGGGCGCTTCCGGTAGCGTGTCAATGGTGTAATCACCACCCTTAACATAGATATCAGGTTGTAACTGTTCAATAATCGCCCTAGCAGTGCTTTCTGGAAAAATCACCACTGCATCTACGGGTTTTAAGTGGCTGAGAACTTCGGCTCGCTGTAATTCTGGTATAATAGGACGGGGAGGATATCCAGCCGAGTGGGGTTTAATCAGGCGAACAGATCGATCGCTATTGAGACCGACCACCAGCGATCGCCCTAAACTTTTGGCTTGGGTCAGGTAGCGAAT # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCAGACCCTACCAATTCCCCGCAAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [11,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.20,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0 Confidence: HIGH] # Array family : NA // Array 1 28679-27099 **** Predicted by CRISPRDetect 2.4 *** >NZ_BIMW01000147.1 Arthrospira platensis NIES-46 sequence147, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ========================================= ================== 28678 35 100.0 34 ................................... CATCATCTCGATGGCATGGGAGTGTTCTCAACTT 28609 35 100.0 36 ................................... CTGCCCAAGGCCTGCCGCCCCTTAAGTCCCTAAAAC 28538 35 100.0 37 ................................... GTTACATCGTTACAGATGTCTACTTTGGCGGTCGCGA 28466 35 100.0 32 ................................... CAGTATAAGGTTGCATATGCACATGTCAACCA 28399 35 100.0 41 ................................... AGGAAGGGTGGATCGTGGTATTGACATGTAAACGAGGTCAA 28323 35 100.0 36 ................................... TGTTTCATGGTCTACAAGGTCTACAAGGGGGGGCGA 28252 35 100.0 37 ................................... ATTGGTGTCCTGAGATATCATTGTGGTATCAAGACAA 28180 35 100.0 35 ................................... TGCTTCGTCCCCTTCGTCCTTGGGACTGGGAACTT 28110 35 100.0 40 ................................... CTTTGATGTCTTTATTCCCAACGGCTACGGCGGCTTCAAG 28035 35 100.0 35 ................................... GAAGGAAGAGGCTTTGTCGTGGAAGGAAGCGACAA 27965 35 100.0 34 ................................... CAGTGAACGATGTAAGCATCATACGGTCCATATC 27896 35 100.0 32 ................................... CGAAAGACAAAGTTTTTGTCCCCCACCTTCCA 27829 35 100.0 35 ................................... TACAAGGTCCTCCTCCACGGGGAACGACAAGTATT 27759 35 100.0 34 ................................... CGGAGGAATGTTTGTTGTTCGGGCAGCAACCTTT 27690 35 100.0 33 ................................... GAATAGGTCTAGACGCATTCAAGTACCCATCTG 27622 35 100.0 34 ................................... CAGTTCGCTCCTTAAAGTGCGAACTATTTGGGTT 27553 35 100.0 32 ................................... CAGGGGGGAAGCCAAGGTCTATCTCGGAAAAA 27486 35 100.0 34 ................................... ACCAACAGCGGCTTCGTGCCGTTCGTAAACTTTC 27417 35 100.0 37 ................................... AAAGTTTCGGCAAAGGGGCTGACAAGCCCCTCCTTTT 27345 35 100.0 35 ................................... AATCGTAGAAATCGTAACTTACAGGTCACTCCATT 27275 35 100.0 37 ................................... TTCTTTGGGACGACGAGTGCAACTACTCCGAAGAAGA 27203 35 100.0 35 ................................... GTAATTACTTTACATTAATTTCAAAGATTGATCAA 27133 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== ========================================= ================== 23 35 100.0 35 GTTGCCATACGTTCGACTTTCAAAGAAGTCTCAAG # Left flank : ATGTTTTTGATGGTAGCTTTCAGATTCGTTTAACTCTCCCAGGGCATCGTAAATATTCCCCAAGCCGTTGTAACAAACCGCATCACAGCCCGGATTCAATTTTCCGAGGAGAGATTTATAGAGTTTTTCTTGTTGGTCATAATAACCCCAAACTCCCAATTGGTCGTGTAATTCTTGGTTGCTTTGGGGGTCAGGAATCACTGTCAAAATTTGGGTCGCCCGCCGCCAATCTTCCACCTCCCATAGGTGATAAAAAGACTCCAGGTAATGCTGCACCCGTTGCAGGGGGGTGGCTTCTTGGGGGGGGATGCTTTGATGACACAAAAAATATTCGACGGCAGTATAAGTAGCTAACTGCTCGATGGGAACTGTATTGATATCGATATCAAGTTCATCCCACAGCATTGGATGTCTCCTTTTGGGTATCCCATTGGCTCTGAAACAGTTTAGCACTACTTCCGTTCAAAAAGCGATCGCTTTTTGACATTTACAAAAAAGTA # Right flank : AGCATAAGAACGAAATCCTTGCTCTGAAGGGATTCTAACCCACCAATTCTATAGGGGTCAAGTCAGTACCCCAATTATTGACATAGATTAGCAATAATTGAGTTAACAAAATGACTGAAACCCGGTCGTAGCAGTCCACCTATAGGGGTCAACGAAAAAATCAGTGATTGGGCGGTTTGCCAGACCCCTGTAGGTGAATGGATGTTACAGGTCAGACCTGGGGCATCATTTGGAAAAAGCTAAATTTTCCACAACATCGGTCGATAGGTCTCCCGTTCTCCCATCAGACAGGAGATGTACTCCCACACCTGTAATTCCAGACAGCGATAGTAGCTGACCTTGTGACCTGTATGGGGATGGGTGGTGGAGAGGGATAGCTTGTCCTGCCAGTGCTTGAGATACTTTTTCAGAGCATCCGAATGTAGGTAAACTGATTCATTTAAGCTGAACAGTCCTGAACATTAATTGACAATGCTCGGACTGTAACTATAGCAATACCA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCCATACGTTCGACTTTCAAAGAAGTCTCAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.80,-4.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [56.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.64 Confidence: HIGH] # Array family : NA // Array 1 4732-5131 **** Predicted by CRISPRDetect 2.4 *** >NZ_BIMW01000152.1 Arthrospira platensis NIES-46 sequence152, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ========================================= ================== 4732 35 97.1 40 ....T.............................. GCTTATGTACAAGCATCGGCTAATTATAGTCCGTGCTTTG 4807 35 100.0 37 ................................... CCATTGTCGATTCCGACAAAAAACCTTGTTCTTATGA 4879 35 100.0 35 ................................... TAGAAAAGGTCGGCGATCCGACCAAAAAATACTGC 4949 35 97.1 37 ..................G................ GCTGGTCAATCGTCTGTCAATACCAGCGGTAATGTTG 5021 35 100.0 41 ................................... CTTGAACAATTACTGCTTGTTCAGAAGCGCAAATCATACCA 5097 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== ========================================= ================== 6 35 99.0 38 GTTTCCATACGTTTAACTTTCAAAGAAGTTTAAAG # Left flank : AATCGGTGCAAAATCTTTGGGTTAAGACTCTTTTGGAAGCTTATTGCAAAGACCTTGAAATAGGTGCAATTGGGTATGCTGATGGGGTTGAGACGGTCTTACTAAACACCCCAGCGACACAGTGGGAGAGTATTTTAACAACCTTGAAAGGGCTGAACCAATCACTTTGGGGCAGACAGAAAATTAAACAGTTATTGGAGCGACGGGAGAAACTTAAACAATCTCCTCTGGAGGAACAGGATTTTGATGAAATTTTTCGAGACTATCAAGAAAAAATAGAAAAGTATATTGCCCAACGCAATCGCCGCTCCTATTGAAAAGCGATTGAATTTTTACAAAACCTGAAATCCATTTGCGATCGCACAGGTCAGCAGTCTCTTTGGGATTGTTATATTGAAGTTTTGCGATCGCGTTATGCCAATCTCAAAACTCTATGGCTTGAAATTGATGCTTCAGATTTACAGTTAAAATAAATCATTTTCATTGATTTCAGTCAACTC # Right flank : GAGTGCCGAGTTGAAACCCTTGCTCTGACTGTACTCTAGCACTCAAATTTGTGGGGGTCAAGCAAACACCCAAATTATTGAGACATATTTGCAATAAGACCCCAGAAAAAATGGCTCAAACCTTTACTCTGACTGAGCTTTGTGTGGGTCAACGAAATCATCAGGGTTTCAGCGATTCTTCAACCCCCACAATGATATTTACCTTACATCTTTGTTAGCATGGGCCGATAGACTTCCCGCTCTCCCATCAGGCAAGAAATATACTCCCAAACCTGCAACTCCAAACACCGATAATAACTAACCTTGTAACCCGTATGGGGATGAGTGGTTTTCAAAGAAAGCTTATCGTGCCAATGCTTCAGATATTTCTTGAGAGCATCGGAATAAATATAAACCCCACCCCGTTCGTCACTTGGGGTAAAATCTTCCGGGGTAAAAATTCCCGAATTCACCAGATAGATAACGAGAGAATCCACCACCGGGGCGCGAAACTCCTCAAT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCATACGTTTAACTTTCAAAGAAGTTTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:71.43%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.41 Confidence: LOW] # Array family : NA // Array 2 11284-10294 **** Predicted by CRISPRDetect 2.4 *** >NZ_BIMW01000152.1 Arthrospira platensis NIES-46 sequence152, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== =========================================== ================== 11283 35 100.0 38 ................................... ATCAATGATGGTTACTCCTGGGTTTCCGCCAGGCAAGA 11210 35 100.0 38 ................................... TGTCCATTCCTTGGGCACTGGTTTCTGCCCTTGCTCTG 11137 35 100.0 41 ................................... GCCAGTAGTTTGGATCGCTATGGCAGTAGTTACCAGTACTA 11061 35 100.0 39 ................................... TACGGTATTTTCTAGCATCTGTTTAGATACTGTAAAGTT 10987 35 100.0 37 ................................... CAACCTTTATCGCTGGTCCAGGCGGAAGGTGGAGAAT 10915 35 100.0 41 ................................... CGGACTATAGTTAGCCGATGCCATCTCCACAGGAGAGAAAA 10839 35 100.0 38 ................................... CTATTTATTTCGTAAATTTTAGCGGGGCAGACCCCGCT 10766 35 100.0 34 ................................... CATGGGCTATAATTAGCCTTAGCCCATACGGTTA 10697 35 100.0 42 ................................... TAAAAGCATCTTTCGCAGAGAGATAACTATTGTAGCTTCCCA 10620 35 100.0 35 ................................... GGGTCATTTCCAAGCGATGCGACGATGATGTCATC 10550 35 100.0 43 ................................... GATCAATGTTGTTAAAACAAAGTTCCGCAAGTTGGCTATCAGT 10472 35 100.0 39 ................................... CTCGTAAACTTTTGCGGGGCATGACCCACTTCCCCGCAT 10398 35 94.3 34 .........................A.......C. CCCACCAACCTCCCACTCAAAGGAGGAGGCCTAA 10329 35 74.3 0 T.........A.T........C...C...A..GCA | A [10321] ========== ====== ====== ====== =================================== =========================================== ================== 14 35 97.8 38 CTTTAGACTTCTCTGAAAGTTAAACGTATGGAAAC # Left flank : TTTATTGATTCATGGAGCAAAGGGAATCTCTAAACAACGGATGGAAGATTTGCGCTCTGAAGATTTAGAAAATCCAAGGAATCAGAAGATTAAAGATACGGTTCGTGTTTCCTGTTTACCCACAGATATTATAGTACAAATGAGCCAAATTTATCGCCTTGTTGTTGAGTTGATGCCACTTTCTGGCTTTCAAAATGTACAAGATTATCTAACGGTGAATCAGGAAACGGGCGATCCGATTTAACCTTATTATCTTTACTCGGAATTTAAGGAGTGGGTTGGGCAAATTTTGGATCGCGAGCAATAATCTTGTGGGGGTCGGGCGATCGCTGAAACCCTTATTCTTTCGTTGAAACCCCCGGAAAGCCTTCTCTGTCTAAGTTTCAGCTATTCTTATTGGGGTATTATTGCAAATATATCTCAATAATTTGGGTGTTTGCTTGACCCCCACAAAATTGAGTGCTAGAGTACAGTCAGAGCAAGGGTTTCAACCCGGCACT # Right flank : AATAACTTGAAAAAATACCCTCAACTTTTGGGTTATTTTGTTAGAATTAAATTCAGTTTCTTTCCATACGTTAGACTTGCTTAGAAGTCAAAGCGTTGCTGTTCTCAAATGGGTTTTAAACCACTCGATATTCAGCTTTGGGAACGAGCTTTTGCAAAATGCGCTGATGATTAACCGCATCATTTTGTGAACGAAAACGACCCACAACCAAACACTGATTATTAGTAACAGATTCTCGTTCTGAGGCGTTTGGCGATCGCACCAAACACCAGGGATGCAATCTTTCAAAAGCTGTCATTGCTCGTTCTCCTTACGCTTTGACCCCACGATAAGCCGAAGAATTTGCACAAAACAGGGCAGGCAACCCTTGACAAAATCAATTATTTGTGCAGCTCAACTGTTCTTTGAATTCAACAGGCAGATCGTCCCATCGTTCCCAGAGCAAATCCATCAGCGCCAAATGTCGAAGATCGGTTTGAGTCGGGCGGCGGTAACGTTTA # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTAGACTTCTCTGAAAGTTAAACGTATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.71%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.30,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA //