Array 1 3577888-3576523 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP043998.1 Clostridium diolis strain DSM 15410 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== =============================================================== ================== 3577887 26 100.0 41 .......................... GAATTCCATTTTTGCTAATAATGCATCCATATTACTGCCTG 3577820 26 100.0 40 .......................... GAATAACTTGTTAGCCATTTCATATATTATCTTTGCAAAT 3577754 26 100.0 40 .......................... GAATGTAAATTCAGAATCATATATTATTTCGAAGTCATCA 3577688 26 100.0 41 .......................... GAATTTCCTTACATTATTATTTTATCAAATATTTAATCATT 3577621 26 92.3 40 .........T.G.............. AAATTTTCCGTCTGCATCAATGATATGGTATCCAACGAAT 3577555 26 84.6 38 ......TA.T......G......... AAATAAGAAGAAATGTCCATACTTATCAAGCTCTATTT 3577491 26 96.2 40 .........T................ GAATACGTAAGGACTAGGTTGAAAGTTAGGATCATTATAT 3577425 26 92.3 40 .......A.T................ AAACCCTAATACTAATTGACCATAATTATTATACCCACAC 3577359 26 84.6 39 ...A.....T......TT........ AAACGTGAATATCTTTTGTTCTTTATGTCTAGCCATTGC 3577294 26 88.5 40 .......C.T............G... AATCTTTGCAAATTATATTGCTATTTTATAATAAGATTGT 3577228 26 80.8 63 ......TA.T.....AG......... AGATACATCTACAATTGCGTAAGTAGCTCTCATAGCTTGGAATTATAAACGCAGTTTGATTTG 3577139 26 88.5 39 .........T.G...A.......... AAATGCGTTATAGTATTTTTCAATATATGCTATTGCTGG 3577074 26 88.5 41 .......A.T......G......... AAATCCACATATAATTTTTACTGGGTGGCCTGAATCTGGTC 3577007 25 88.5 39 ........AT......-......... AAATTAATTTTGTATATCGCATATTGACAGATTATTGGG 3576943 26 92.3 41 .........T.....A.......... AAATTATTGTTGAGTTACTTTATGTGCTAATGCAGCAATAC 3576876 26 92.3 40 .........T...............A AAATGTTATTTCTACTTTGTACTTATATATTGCTTCGTAT 3576810 26 76.9 39 .......C.T.....AG.G......G AAATTTTCCGTCGGCATCAAAGATTTGATCAGCAACTAT 3576745 26 73.1 37 .G.C.....T..T..ATA........ AAACATGAACTTTCTGAGTTGTCTTTTTTGGAAATGG 3576682 26 84.6 42 A........T.T...A.......... AAACTCTTTTTTGAATCTGAAGTAGTAACTTTCTAATTCAGT 3576614 26 88.5 40 T........T......G......... AAATTATTTAATAACTGTCCCTGTTTCCTTGTGAATTAAA 3576548 26 88.5 0 .........T.....T.........C | ========== ====== ====== ====== ========================== =============================================================== ================== 21 26 89.6 41 GATTAACTTCAACATGAGATGTATTT # Left flank : TATCGTAAATAAAAGAGAGTACAAAATCAATACTTTGAATTTTGAAGAACTAGAATTTGTTTTCTCATGGGTTGGACGAATTATAAAGACTAAAAAAAGTAATGAAAATTATGATAACAAGAATAACAATTTTCATGATAGGAATAAAAATAATAATTATCATGATAGAAATTCTAATAAATTTAATAAATCTAATATAAATAAATATAGCAAAGAGAAAACTAAATCATATTATTCTACAAAAAGTGATAGCAATGAAGGTTTAAGTAGTATGGCAGAGCAACTTATGAAGTGGAAAAGTAAATAATAAAAATAAAGTAAATGAAAAATTACCATCCTCAAAGTCGCATTATTTTTACGAAGCGATATAAACAGAGAGTTTTCAAGGGTTTTATTATAAAATGTTAAATTAAGATATTTACTTGGTAAAAATTTTTGAATGTGTTATTATAACATAAGTGTAGCTATTAGAAGATTATATGAATGGCTTATTTACTTAG # Right flank : AACATAATGAACTTTTTGATTAATTTTATACGTAAATTGATATAGAGAAATTAGGAATAAAATTTATATTTCATAAGGGAGGTGAATAGATATGAAGGTATTTGAAATTTTATTGAAAGTATATTTATTGGAAGATATAGAATTAAATGATTCACAGAATAAAATATTAAAACTAATTGATAAAACGTTAGGTCAAGATGAAAGGACTTTGGAATTACACAATAAGAATGATTTTAAAAATTATTGCTTTAATTCTTTTTATCCTTTAGAGAAAGATGGAATATATAAAGAAGGTAATATTTATACAATAACTATAAGAACTGTTGATAAATATTTAGCAACATATCTTAATAATAAGTTAGCTAATTCATATACATATTCAATTAAAGGATTAAAGGCGGATCTTAGGATAATACCAATAAAGAAATTAAAGAAAATATATTCTATTACTCCACTAGTAATAAAAAATGATGATGGATATTGGAAAAATTTAATAAGCT # Questionable array : NO Score: 4.93 # Score Detail : 1:0, 2:3, 3:0, 4:0.48, 5:0, 6:0.25, 7:-0.07, 8:1, 9:0.27, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTAACTTCAACATGAGATGTATTT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.08%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [27-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [81.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 2 3587475-3586855 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP043998.1 Clostridium diolis strain DSM 15410 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 3587474 30 100.0 35 .............................. TATAAAAAAATACGTGGTAACTCTTACGGTATGTG 3587409 30 100.0 36 .............................. AAATGAAATTGACTCAAAAAGAACTATAGTTGGAAC 3587343 30 100.0 38 .............................. TCAATAACTTCTCGAACTTTGTTATAGCTCCTAAAGAA 3587275 30 100.0 36 .............................. TTGTAATTATATGCGACTGATGTTGTATAATCTATT 3587209 30 100.0 34 .............................. ATAGGACCACTTACGGAATAAATAAAGATAAAGA 3587145 30 100.0 35 .............................. TAATCTGAATCGTCTTTTCTTATCTCAAAATCTTT 3587080 30 100.0 36 .............................. AAATCCATACCAACTTTGGCTGCTGCAACCCCTAAC 3587014 30 100.0 35 .............................. TTTTTATCTACTAATTGAACACTCACATTCAAGCT 3586949 30 96.7 35 ......T....................... AACTTAGTATAGTCTGGGAATGCGTCCATCTTGAA 3586884 30 83.3 0 ......T................A.A.T.C | ========== ====== ====== ====== ============================== ====================================== ================== 10 30 98.0 36 GTTTAAGATTAACATGAGATGTATTTAAAT # Left flank : TGAATTATTTTACATATATTGTGTTTAATGTTAGATTAACCTCTACATATAGTATATATGGTCAAAAGCTATATAACGTATATATGAGAGCAATTTGGAGAAGAAAAATTATTATAAAGGAAGAGCTAAGAATTGATAATGGTAATGGGTATAGCTGTGATGAGTTCTATTAAAGAACAAATCAAGCTAATGAAATGACAAAACAAAAGATATAAAGCTTTATGTGAAAATACATATTAACCGTGATGAGTGGCGAGTTGACGGAAGTAGAACTTGGGATAGTAAATGTTGGATTAATATCATAAGTGGGAGTTATAAAATTATGATTTTTACCAACCTGAGAATTTATGAAATACTTAAAAGTTAGATAAATAGATTAGTGAAGACACCTATTAATTAGTTCAGAAATTATGCTTGGAGGTTGGTAAATTTTCCGAGATGTGTTATTATTACTATAAGGACAAAGAGCATTAAATTATATGAATGGCTTATTTACTTTG # Right flank : TTGTAACTCAAAGATATTAATAAATAATAGATTATTTCAGAAGCAAAAATACAATATGCAAATTTATGGATACCATTGATATAAAATTTATATTAATGGTATTTTTGTTTTTTAAGGAGGAAAAGTGGTAAAATAAGAGAATGCTTAGATTATATGGAAAGATAGAGATGAAGTTAAAATGAAGAGGTGATAATATGTCTAAAAAATTGTTTACGTTTTTGGGCACAACTGACTATAAACCAACGGTTTATTATTTTAATGACGATAGTGTTAGTGAAGATAACTATGAGAAGCTAAAAACACCATATGTTCAACTTTCATTGTGCAAAAAACTTGGATATGATACTGAATTAATCGTATTTCTAACTCCAGAAGCAAGAGAAGCTAATTGGATTTCTAAGGATAAAAAAGAGGGATTACAGGAGATATTAAAAAAGGAAGGTATAAATGCTAAAGCAGTTGACATTAAAAGCGGAAAAGATGTTAATGAACTATGGGAT # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAAGATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //