Array 1 18333-20881 **** Predicted by CRISPRDetect 2.4 *** >NZ_JVIZ01000350.1 Lacticaseibacillus rhamnosus strain 390_LRHA 1693_28069_314254_1015_,1541_,121+, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================ ================== 18333 36 100.0 30 .................................... TGCGACTAACACCTGCGATCAAAGCGAAAC 18399 36 100.0 30 .................................... TGCCAGTTGCTGGAGGAGATCACAACGACT 18465 36 100.0 31 .................................... TGAAGACAAGGTTGCGCCCTGTACACTGTTA 18532 36 100.0 30 .................................... GCATTCAGCGTTGGGACAATCCTTCCAGAA 18598 36 100.0 30 .................................... TAATTCGCAGCTAAAACGTGTCACCGAGCA 18664 36 100.0 30 .................................... TAATGTGCCGGTGGGAGCAATGGTGTTATC 18730 36 100.0 30 .................................... AGTAAGGTAGCCAAATACAACCATAAGGGT 18796 36 100.0 30 .................................... AACTATCTAACACGCTATACACAGAATGGC 18862 36 100.0 30 .................................... TTTAATATGCAGGCGGCGACTGATTTATTT 18928 36 100.0 30 .................................... TGATTTGCGAGATGTCGCGATAAGAAGTCA 18994 36 100.0 30 .................................... GACAACAGACTCCGTCAACATCAGTCTTAA 19060 36 100.0 30 .................................... ATAAACATCGTATGCGAATCGTAACAACGT 19126 36 100.0 30 .................................... AGTTGATTGAGGCGCGGATGTACATTCCTG 19192 36 100.0 30 .................................... CGGCACGCTATTCCATCCGATTAGCTACTT 19258 36 100.0 30 .................................... CCGTTTTGGTTGCAAAACGAACCGATTACG 19324 36 100.0 30 .................................... AAGGTGTACTGCTTAGCTGACTCCCACGTG 19390 36 100.0 30 .................................... GAAAGTTCTTTAAGTTGACCACTCATTTCA 19456 36 100.0 32 .................................... TCAGGGTGCCGGCTACATATACACGACTTTCG 19524 36 100.0 30 .................................... TCTGGAAGCCCGCAATAGTCAATTGAAGCT 19590 36 100.0 30 .................................... AAATGGTTTGAATACCCTTATCCCGCCATT 19656 36 100.0 30 .................................... TAATGACGCTTAACGCTCTCCGGTTGGTCT 19722 36 100.0 30 .................................... AGTCGTGCAAATCCACGTGCGCGCGTTGCA 19788 36 100.0 30 .................................... TTTTATGATGGGCTTGTATTTTCCCAAATA 19854 36 100.0 30 .................................... GGCAATTTTAAAGCCGTGACCGATGCCACG 19920 36 100.0 30 .................................... AATAGCAACCGAAAGCGCTCCAGTGTCGCC 19986 36 100.0 30 .................................... GTAGTGCATACCATCATCACGAGTGCCGTT 20052 36 100.0 30 .................................... TGAACACGATGACGTAAAAGAAATGTATGT 20118 36 100.0 30 .................................... GAATGTTTTACCATCGGAACGCGTGGTAAT 20184 36 100.0 30 .................................... AATAGCCAAGTAAATACCGGCACGATTTAC 20250 36 100.0 30 .................................... CAACATCAACAACAGCCGGCAATTGCTGCC 20316 36 100.0 30 .................................... ATGACGCAGTTGGCGAAACCTTTGCACGTT 20382 36 100.0 30 .................................... TCGCTGACATTGACCATCAACGGCGCCGAG 20448 36 100.0 30 .................................... GCGTGTTAGTCGCTTGTGTGGCTTACCGTT 20514 36 100.0 30 .................................... GCGGCATCTTCAAAATCAAAACGACGCGCA 20580 36 100.0 30 .................................... CAATATTTTGCCCCTTGTTCCGTTGCGCCA 20646 36 100.0 30 .................................... GTTGACGCGTTGCGCTGTCGCTGGCCGTTG 20712 36 100.0 30 .................................... TGATGACGAAGTGAGTTTGCCCACCGCTTG 20778 36 100.0 30 .................................... ACTCGGGTATTGACAAAGATCGACGCGGCA 20844 36 86.1 0 .......................AA.C....T...G | C,G [20870,20876] ========== ====== ====== ====== ==================================== ================================ ================== 39 36 99.6 30 GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC # Left flank : GAGCTGGATTTGGACAAGTTATTTCAACGCTTGATCATCAAAAAGGTAAGCCAATTGATAGAGGATCAGCGGCTGATTGAGTTGATTGAGCAGTCACAACGACTGGCAATGAGCTTATTGAGAGAGCCGTTGTTAAGTGAACTTCCAGTCACAGTCGAACCTGGTGGAAAACTTGAACAAATCATGAAATACTGTAATGTTCATTTTGATGAGGAAGTACTCACGGAGCCTTTCTCGAAAGTTGAAGCGGCAATTCAGACTTTGGCGAAACTTGAGGAGAAACGTCTTGTCATTTTTGCCAACATCAGTCATTATTTAGATGTTGAAAGTCTGAGCAAGCTGTTAGATCAGGTTAAGAACACATCGTTGGAATTACTTCTCATTGAATTTTCAGATGTCGAACGCAGAAAGTTTTTTGAGAAGTGCCAGTATATCTATATTGACAGAGATTTTATGGATAGCCGAGAACTGATTGATTAAGAGGCTGTGTGAAAACACCG # Right flank : GACTCACCTCATAAATGCTATGCAAATCCCAAAAGAAGGCAACAGCAATGTCAAAAGCGAAACTAATCCTTTCGCCAGTATTTTACACTGATCTCAAAGAAATCCGTCACATGTACCAACAGGCGTTCAAATCACTTTACGGCAAATATCAAGATCGGGAAACCAATCCCTACTGTGAATCGTTGAAAAGCTTACAGAAAAAGTTCAAACGGCCTAACAATGCCTTCTTCTTTATAACCGTTGAAGATAAACACATAGGCCTGATTCGCGTTGTAACAGATCTCAAAAATTCGGCAGCCCGTATTTCACCATTTTTAATCTTGCCGTTTTATCAAGGAAAGGGATACGCTCAGCTCGGACTACAGTTGATTGAAGAACAGTTTCCGCTCATTCAAACATGGTATGTAGACACGATTGCGGAAGAACCCAAGTTGGTACATTTGTATCGCAAAGTCGGTTTTCAGCAGCTACCAGATCGGGAAACGACGATTAATGAGCAT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: F [matched GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //